Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 U2.7-201ENST00000619197 100 ntBASIC0.8□□□□□ -2.28
SSU72Q9NP77 RNU6-669P-201ENST00000365575 107 ntBASIC0.79□□□□□ -2.28
SSU72Q9NP77 MIR501-201ENST00000390204 84 ntBASIC0.79□□□□□ -2.28
SSU72Q9NP77 MIR516B1-201ENST00000385211 90 ntBASIC0.78□□□□□ -2.28
SSU72Q9NP77 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
SSU72Q9NP77 MIR4452-201ENST00000583004 71 ntBASIC0.78□□□□□ -2.28
SSU72Q9NP77 MIR4677-201ENST00000584153 80 ntBASIC0.78□□□□□ -2.28
SSU72Q9NP77 AC090617.8-201ENST00000623339 167 ntBASIC0.78□□□□□ -2.28
SSU72Q9NP77 SNORD71-201ENST00000411292 86 ntBASIC0.77□□□□□ -2.29
SSU72Q9NP77 AC244090.1-201ENST00000441884 93 ntBASIC0.77□□□□□ -2.29
SSU72Q9NP77 RNU6-848P-201ENST00000515948 107 ntBASIC0.77□□□□□ -2.29
SSU72Q9NP77 RNU6-617P-201ENST00000516147 107 ntBASIC0.77□□□□□ -2.29
SSU72Q9NP77 RNU6-473P-201ENST00000516164 107 ntBASIC0.77□□□□□ -2.29
SSU72Q9NP77 RNU6-1049P-201ENST00000516414 107 ntBASIC0.77□□□□□ -2.29
SSU72Q9NP77 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SSU72Q9NP77 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SSU72Q9NP77 MIR20A-201ENST00000362279 71 ntBASIC0.76□□□□□ -2.29
SSU72Q9NP77 SNORA49-201ENST00000386157 136 ntBASIC0.76□□□□□ -2.29
SSU72Q9NP77 SCARNA21.1-201ENST00000515996 128 ntBASIC0.76□□□□□ -2.29
SSU72Q9NP77 RNU6-175P-201ENST00000516896 107 ntBASIC0.76□□□□□ -2.29
SSU72Q9NP77 SNORD44.1-201ENST00000363202 61 ntBASIC0.75□□□□□ -2.29
SSU72Q9NP77 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
SSU72Q9NP77 RNU7-174P-201ENST00000516248 59 ntBASIC0.75□□□□□ -2.29
SSU72Q9NP77 RNA5SP220-201ENST00000516298 104 ntBASIC0.75□□□□□ -2.29
SSU72Q9NP77 RNU7-188P-201ENST00000517063 64 ntBASIC0.75□□□□□ -2.29
SSU72Q9NP77 MIR548AD-201ENST00000584780 82 ntBASIC0.75□□□□□ -2.29
SSU72Q9NP77 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SSU72Q9NP77 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
SSU72Q9NP77 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
SSU72Q9NP77 RNU6-945P-201ENST00000383947 107 ntBASIC0.73□□□□□ -2.29
SSU72Q9NP77 snoU13.18-201ENST00000459483 104 ntBASIC0.73□□□□□ -2.29
SSU72Q9NP77 CYP3A54P-201ENST00000566950 75 ntBASIC0.73□□□□□ -2.29
SSU72Q9NP77 MIR548V-201ENST00000584165 80 ntBASIC0.73□□□□□ -2.29
SSU72Q9NP77 MIR3925-201ENST00000584674 77 ntBASIC0.73□□□□□ -2.29
SSU72Q9NP77 U7.6-201ENST00000610841 64 ntBASIC0.73□□□□□ -2.29
SSU72Q9NP77 SNORA25.5-201ENST00000363782 126 ntBASIC0.72□□□□□ -2.29
SSU72Q9NP77 RNA5SP192-201ENST00000364404 120 ntBASIC0.72□□□□□ -2.29
SSU72Q9NP77 RNU6-42P-201ENST00000384165 107 ntBASIC0.72□□□□□ -2.29
SSU72Q9NP77 MIR630-201ENST00000384957 97 ntBASIC0.72□□□□□ -2.29
SSU72Q9NP77 MIR760-201ENST00000390220 80 ntBASIC0.72□□□□□ -2.29
SSU72Q9NP77 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
SSU72Q9NP77 SNORD114-22-201ENST00000365423 72 ntBASIC0.71□□□□□ -2.3
SSU72Q9NP77 RNU6-337P-201ENST00000391243 106 ntBASIC0.71□□□□□ -2.3
SSU72Q9NP77 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
SSU72Q9NP77 MIR4698-201ENST00000577795 80 ntBASIC0.71□□□□□ -2.3
SSU72Q9NP77 AC243829.6-201ENST00000612652 106 ntBASIC0.71□□□□□ -2.3
SSU72Q9NP77 U4.4-201ENST00000620626 117 ntBASIC0.71□□□□□ -2.3
SSU72Q9NP77 MIR6734-201ENST00000621166 68 ntBASIC0.71□□□□□ -2.3
SSU72Q9NP77 SNORD114-29-201ENST00000364819 70 ntBASIC0.7□□□□□ -2.3
SSU72Q9NP77 RNA5SP128-201ENST00000365305 116 ntBASIC0.7□□□□□ -2.3
SSU72Q9NP77 MIR548C-201ENST00000384815 97 ntBASIC0.7□□□□□ -2.3
SSU72Q9NP77 SNORA75.1-201ENST00000391130 148 ntBASIC0.7□□□□□ -2.3
SSU72Q9NP77 MIR3973-201ENST00000579824 107 ntBASIC0.7□□□□□ -2.3
SSU72Q9NP77 RN7SL660P-201ENST00000614852 299 ntBASIC0.7□□□□□ -2.3
SSU72Q9NP77 RNU1-93P-201ENST00000364704 169 ntBASIC0.69□□□□□ -2.3
SSU72Q9NP77 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.69□□□□□ -2.3
SSU72Q9NP77 RNU6-863P-201ENST00000515989 104 ntBASIC0.69□□□□□ -2.3
SSU72Q9NP77 U6.96-201ENST00000636425 70 ntBASIC0.69□□□□□ -2.3
SSU72Q9NP77 MIR499B-201ENST00000636498 73 ntBASIC0.69□□□□□ -2.3
SSU72Q9NP77 RNU6-698P-201ENST00000363523 107 ntBASIC0.68□□□□□ -2.3
SSU72Q9NP77 SNORD114-27-201ENST00000363766 70 ntBASIC0.68□□□□□ -2.3
SSU72Q9NP77 RNU6-34P-201ENST00000364874 107 ntBASIC0.68□□□□□ -2.3
SSU72Q9NP77 RNU6-499P-201ENST00000365615 107 ntBASIC0.68□□□□□ -2.3
SSU72Q9NP77 MIR517B-201ENST00000385102 67 ntBASIC0.68□□□□□ -2.3
SSU72Q9NP77 SNORA68.3-201ENST00000515906 83 ntBASIC0.68□□□□□ -2.3
SSU72Q9NP77 MIR103A1-201ENST00000362165 78 ntBASIC0.67□□□□□ -2.3
SSU72Q9NP77 Y_RNA.118-201ENST00000363300 101 ntBASIC0.67□□□□□ -2.3
SSU72Q9NP77 MIR151B-201ENST00000584249 96 ntBASIC0.67□□□□□ -2.3
SSU72Q9NP77 AC243829.3-201ENST00000622177 108 ntBASIC0.67□□□□□ -2.3
SSU72Q9NP77 Y_RNA.355-201ENST00000365462 98 ntBASIC0.66□□□□□ -2.3
SSU72Q9NP77 MIR633-201ENST00000384821 98 ntBASIC0.66□□□□□ -2.3
SSU72Q9NP77 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.66□□□□□ -2.3
SSU72Q9NP77 RNU6-92P-201ENST00000605893 104 ntBASIC0.66□□□□□ -2.3
SSU72Q9NP77 MIR6788-201ENST00000618842 66 ntBASIC0.66□□□□□ -2.3
SSU72Q9NP77 MIR96-201ENST00000362288 78 ntBASIC0.65□□□□□ -2.31
SSU72Q9NP77 RNU6-302P-201ENST00000365249 107 ntBASIC0.65□□□□□ -2.31
SSU72Q9NP77 MIR876-201ENST00000401147 81 ntBASIC0.65□□□□□ -2.31
SSU72Q9NP77 RNU6-1223P-201ENST00000517124 104 ntBASIC0.65□□□□□ -2.31
SSU72Q9NP77 AC084368.1-201ENST00000620935 65 ntBASIC0.65□□□□□ -2.31
SSU72Q9NP77 MIR373-201ENST00000362273 69 ntBASIC0.64□□□□□ -2.31
SSU72Q9NP77 MIR520E-201ENST00000384867 87 ntBASIC0.64□□□□□ -2.31
SSU72Q9NP77 RNU6-1246P-201ENST00000391064 107 ntBASIC0.64□□□□□ -2.31
SSU72Q9NP77 RPS29P1-201ENST00000465274 159 ntBASIC0.64□□□□□ -2.31
SSU72Q9NP77 MIR466-201ENST00000580653 84 ntBASIC0.64□□□□□ -2.31
SSU72Q9NP77 MIR6773-201ENST00000612812 74 ntBASIC0.64□□□□□ -2.31
SSU72Q9NP77 SNORD60.1-201ENST00000362451 73 ntBASIC0.63□□□□□ -2.31
SSU72Q9NP77 Y_RNA.325-201ENST00000365171 122 ntBASIC0.63□□□□□ -2.31
SSU72Q9NP77 RNU6-1036P-201ENST00000383959 104 ntBASIC0.63□□□□□ -2.31
SSU72Q9NP77 MIR1255B2-201ENST00000408618 67 ntBASIC0.63□□□□□ -2.31
SSU72Q9NP77 RNU6-122P-201ENST00000516818 107 ntBASIC0.62□□□□□ -2.31
SSU72Q9NP77 MIRLET7D-201ENST00000362263 87 ntBASIC0.61□□□□□ -2.31
SSU72Q9NP77 RNU6-502P-201ENST00000362419 108 ntBASIC0.61□□□□□ -2.31
SSU72Q9NP77 RNU6-940P-201ENST00000363433 104 ntBASIC0.61□□□□□ -2.31
SSU72Q9NP77 MIR519A2-201ENST00000384990 87 ntBASIC0.61□□□□□ -2.31
SSU72Q9NP77 SNORD113-2-201ENST00000391082 72 ntBASIC0.61□□□□□ -2.31
SSU72Q9NP77 MIR548J-201ENST00000408833 112 ntBASIC0.61□□□□□ -2.31
SSU72Q9NP77 AC079150.2-201ENST00000443733 78 ntBASIC0.61□□□□□ -2.31
SSU72Q9NP77 SNORD2-201ENST00000459163 69 ntBASIC0.61□□□□□ -2.31
SSU72Q9NP77 Y_RNA.246-201ENST00000364495 108 ntBASIC0.6□□□□□ -2.31
SSU72Q9NP77 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 271 ms