Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MIR630-201ENST00000384957 97 ntBASIC1.09□□□□□ -2.23
NEUROD4Q9HD90 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
NEUROD4Q9HD90 AC079150.2-201ENST00000443733 78 ntBASIC1.09□□□□□ -2.23
NEUROD4Q9HD90 RNU6-1232P-201ENST00000516299 86 ntBASIC1.09□□□□□ -2.23
NEUROD4Q9HD90 MIR466-201ENST00000580653 84 ntBASIC1.09□□□□□ -2.23
NEUROD4Q9HD90 SNORA15B-2-201ENST00000384058 135 ntBASIC1.08□□□□□ -2.24
NEUROD4Q9HD90 SNORA15B-1-201ENST00000384334 135 ntBASIC1.08□□□□□ -2.24
NEUROD4Q9HD90 MIR548C-201ENST00000384815 97 ntBASIC1.08□□□□□ -2.24
NEUROD4Q9HD90 MIR140-201ENST00000385282 100 ntBASIC1.08□□□□□ -2.24
NEUROD4Q9HD90 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.08□□□□□ -2.24
NEUROD4Q9HD90 MIR6788-201ENST00000618842 66 ntBASIC1.08□□□□□ -2.24
NEUROD4Q9HD90 uc_338.10-201ENST00000621872 182 ntBASIC1.08□□□□□ -2.24
NEUROD4Q9HD90 SNORD118-201ENST00000363593 134 ntBASIC1.07□□□□□ -2.24
NEUROD4Q9HD90 SNORD114-27-201ENST00000363766 70 ntBASIC1.07□□□□□ -2.24
NEUROD4Q9HD90 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
NEUROD4Q9HD90 RNU7-174P-201ENST00000516248 59 ntBASIC1.07□□□□□ -2.24
NEUROD4Q9HD90 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
NEUROD4Q9HD90 RNU6-1079P-201ENST00000362861 110 ntBASIC1.06□□□□□ -2.24
NEUROD4Q9HD90 RNU6-829P-201ENST00000363700 112 ntBASIC1.06□□□□□ -2.24
NEUROD4Q9HD90 RNU6-110P-201ENST00000384508 104 ntBASIC1.06□□□□□ -2.24
NEUROD4Q9HD90 RNU4-54P-201ENST00000516428 129 ntBASIC1.06□□□□□ -2.24
NEUROD4Q9HD90 AC090617.8-201ENST00000623339 167 ntBASIC1.06□□□□□ -2.24
NEUROD4Q9HD90 MIR6779-201ENST00000617283 64 ntBASIC1.05□□□□□ -2.24
NEUROD4Q9HD90 MIR516B1-201ENST00000385211 90 ntBASIC1.04□□□□□ -2.24
NEUROD4Q9HD90 MIR548J-201ENST00000408833 112 ntBASIC1.04□□□□□ -2.24
NEUROD4Q9HD90 RNU4-37P-201ENST00000410214 84 ntBASIC1.04□□□□□ -2.24
NEUROD4Q9HD90 MIR5706-201ENST00000579841 80 ntBASIC1.04□□□□□ -2.24
NEUROD4Q9HD90 U4.4-201ENST00000620626 117 ntBASIC1.04□□□□□ -2.24
NEUROD4Q9HD90 PVT1_3.1-201ENST00000620853 95 ntBASIC1.04□□□□□ -2.24
NEUROD4Q9HD90 RNU6-987P-201ENST00000384759 104 ntBASIC1.03□□□□□ -2.24
NEUROD4Q9HD90 RNU6-92P-201ENST00000605893 104 ntBASIC1.03□□□□□ -2.24
NEUROD4Q9HD90 RNU6-446P-201ENST00000362827 106 ntBASIC1.02□□□□□ -2.25
NEUROD4Q9HD90 RNU6-940P-201ENST00000363433 104 ntBASIC1.02□□□□□ -2.25
NEUROD4Q9HD90 MIR517B-201ENST00000385102 67 ntBASIC1.02□□□□□ -2.25
NEUROD4Q9HD90 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
NEUROD4Q9HD90 RNA5SP325-201ENST00000363756 130 ntBASIC1.01□□□□□ -2.25
NEUROD4Q9HD90 SNORA40.8-201ENST00000411034 126 ntBASIC1.01□□□□□ -2.25
NEUROD4Q9HD90 CYP3A54P-201ENST00000566950 75 ntBASIC1.01□□□□□ -2.25
NEUROD4Q9HD90 MIR6755-201ENST00000619993 66 ntBASIC1.01□□□□□ -2.25
NEUROD4Q9HD90 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1□□□□□ -2.25
NEUROD4Q9HD90 SNORD60.1-201ENST00000362451 73 ntBASIC1□□□□□ -2.25
NEUROD4Q9HD90 Y_RNA.423-201ENST00000384057 113 ntBASIC1□□□□□ -2.25
NEUROD4Q9HD90 RNU6-122P-201ENST00000516818 107 ntBASIC1□□□□□ -2.25
NEUROD4Q9HD90 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
NEUROD4Q9HD90 RNU6-698P-201ENST00000363523 107 ntBASIC0.99□□□□□ -2.25
NEUROD4Q9HD90 RNU6-34P-201ENST00000364874 107 ntBASIC0.99□□□□□ -2.25
NEUROD4Q9HD90 RNU6-302P-201ENST00000365249 107 ntBASIC0.99□□□□□ -2.25
NEUROD4Q9HD90 PSMC1P5-201ENST00000512850 177 ntBASIC0.99□□□□□ -2.25
NEUROD4Q9HD90 MIR4653-201ENST00000585107 83 ntBASIC0.99□□□□□ -2.25
NEUROD4Q9HD90 Y_RNA.236-201ENST00000364427 111 ntBASIC0.98□□□□□ -2.25
NEUROD4Q9HD90 MIR518A1-201ENST00000385068 85 ntBASIC0.98□□□□□ -2.25
NEUROD4Q9HD90 RNU6-229P-201ENST00000516614 102 ntBASIC0.98□□□□□ -2.25
NEUROD4Q9HD90 U6.96-201ENST00000636425 70 ntBASIC0.98□□□□□ -2.25
NEUROD4Q9HD90 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
NEUROD4Q9HD90 MIR20A-201ENST00000362279 71 ntBASIC0.97□□□□□ -2.25
NEUROD4Q9HD90 SNORA2A-201ENST00000383885 135 ntBASIC0.97□□□□□ -2.25
NEUROD4Q9HD90 AC244090.1-201ENST00000441884 93 ntBASIC0.97□□□□□ -2.25
NEUROD4Q9HD90 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
NEUROD4Q9HD90 AC243829.6-201ENST00000612652 106 ntBASIC0.97□□□□□ -2.25
NEUROD4Q9HD90 Y_RNA.325-201ENST00000365171 122 ntBASIC0.96□□□□□ -2.26
NEUROD4Q9HD90 SNORA49-201ENST00000386157 136 ntBASIC0.96□□□□□ -2.26
NEUROD4Q9HD90 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
NEUROD4Q9HD90 RNU6-175P-201ENST00000516896 107 ntBASIC0.96□□□□□ -2.26
NEUROD4Q9HD90 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
NEUROD4Q9HD90 RNU6-1246P-201ENST00000391064 107 ntBASIC0.95□□□□□ -2.26
NEUROD4Q9HD90 SNORD113-2-201ENST00000391082 72 ntBASIC0.95□□□□□ -2.26
NEUROD4Q9HD90 RNU6-337P-201ENST00000391243 106 ntBASIC0.95□□□□□ -2.26
NEUROD4Q9HD90 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.95□□□□□ -2.26
NEUROD4Q9HD90 RNU7-188P-201ENST00000517063 64 ntBASIC0.95□□□□□ -2.26
NEUROD4Q9HD90 MIR3938-201ENST00000582157 103 ntBASIC0.95□□□□□ -2.26
NEUROD4Q9HD90 MIR6767-201ENST00000637302 66 ntBASIC0.95□□□□□ -2.26
NEUROD4Q9HD90 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
NEUROD4Q9HD90 RNU6-614P-201ENST00000384369 107 ntBASIC0.94□□□□□ -2.26
NEUROD4Q9HD90 MIR501-201ENST00000390204 84 ntBASIC0.94□□□□□ -2.26
NEUROD4Q9HD90 MIR5000-201ENST00000577717 103 ntBASIC0.94□□□□□ -2.26
NEUROD4Q9HD90 U6.59-201ENST00000615686 107 ntBASIC0.94□□□□□ -2.26
NEUROD4Q9HD90 AC098934.3-201ENST00000430450 190 ntBASIC0.93□□□□□ -2.26
NEUROD4Q9HD90 MIR4677-201ENST00000584153 80 ntBASIC0.93□□□□□ -2.26
NEUROD4Q9HD90 SNORA41B-201ENST00000384785 128 ntBASIC0.92□□□□□ -2.26
NEUROD4Q9HD90 AL590095.2-201ENST00000604136 117 ntBASIC0.92□□□□□ -2.26
NEUROD4Q9HD90 Y_RNA.246-201ENST00000364495 108 ntBASIC0.91□□□□□ -2.26
NEUROD4Q9HD90 SNORD113-4-201ENST00000364802 75 ntBASIC0.91□□□□□ -2.26
NEUROD4Q9HD90 RN7SL793P-201ENST00000583259 296 ntBASIC0.91□□□□□ -2.26
NEUROD4Q9HD90 MIR6857-201ENST00000613267 93 ntBASIC0.91□□□□□ -2.26
NEUROD4Q9HD90 AC243829.3-201ENST00000622177 108 ntBASIC0.91□□□□□ -2.26
NEUROD4Q9HD90 SNORA9.1-201ENST00000362412 131 ntBASIC0.9□□□□□ -2.27
NEUROD4Q9HD90 MIR216A-201ENST00000385063 110 ntBASIC0.9□□□□□ -2.27
NEUROD4Q9HD90 MIR1255B2-201ENST00000408618 67 ntBASIC0.9□□□□□ -2.27
NEUROD4Q9HD90 SNORD114-29-201ENST00000364819 70 ntBASIC0.89□□□□□ -2.27
NEUROD4Q9HD90 MIR519A2-201ENST00000384990 87 ntBASIC0.89□□□□□ -2.27
NEUROD4Q9HD90 SNORD71-201ENST00000411292 86 ntBASIC0.89□□□□□ -2.27
NEUROD4Q9HD90 MIR548AG1-201ENST00000579932 66 ntBASIC0.89□□□□□ -2.27
NEUROD4Q9HD90 MIR3925-201ENST00000584674 77 ntBASIC0.89□□□□□ -2.27
NEUROD4Q9HD90 MIR548AD-201ENST00000584780 82 ntBASIC0.88□□□□□ -2.27
NEUROD4Q9HD90 U7.6-201ENST00000610841 64 ntBASIC0.88□□□□□ -2.27
NEUROD4Q9HD90 RN7SL660P-201ENST00000614852 299 ntBASIC0.88□□□□□ -2.27
NEUROD4Q9HD90 MIR760-201ENST00000390220 80 ntBASIC0.87□□□□□ -2.27
NEUROD4Q9HD90 RNU6-518P-201ENST00000516056 96 ntBASIC0.87□□□□□ -2.27
NEUROD4Q9HD90 CYP3A137P-201ENST00000562436 69 ntBASIC0.87□□□□□ -2.27
NEUROD4Q9HD90 MIR6773-201ENST00000612812 74 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms