Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 SCARNA17.3-201ENST00000516381 125 ntBASIC1.16□□□□□ -2.22
RC3H2Q9HBD1 Y_RNA.125-201ENST00000363371 111 ntBASIC1.15□□□□□ -2.23
RC3H2Q9HBD1 SNORA63.6-201ENST00000364921 119 ntBASIC1.15□□□□□ -2.23
RC3H2Q9HBD1 Y_RNA.407-201ENST00000383986 113 ntBASIC1.15□□□□□ -2.23
RC3H2Q9HBD1 SNORA15B-2-201ENST00000384058 135 ntBASIC1.14□□□□□ -2.23
RC3H2Q9HBD1 SNORA15B-1-201ENST00000384334 135 ntBASIC1.14□□□□□ -2.23
RC3H2Q9HBD1 RNU6-1184P-201ENST00000384588 108 ntBASIC1.14□□□□□ -2.23
RC3H2Q9HBD1 MIR4473-201ENST00000583731 91 ntBASIC1.14□□□□□ -2.23
RC3H2Q9HBD1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.14□□□□□ -2.23
RC3H2Q9HBD1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
RC3H2Q9HBD1 MIR18A-201ENST00000362310 71 ntBASIC1.13□□□□□ -2.23
RC3H2Q9HBD1 MIR598-201ENST00000384868 97 ntBASIC1.13□□□□□ -2.23
RC3H2Q9HBD1 SNORD113-2-201ENST00000391082 72 ntBASIC1.13□□□□□ -2.23
RC3H2Q9HBD1 RNA5SP227-201ENST00000516184 113 ntBASIC1.13□□□□□ -2.23
RC3H2Q9HBD1 MIR6779-201ENST00000617283 64 ntBASIC1.13□□□□□ -2.23
RC3H2Q9HBD1 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
RC3H2Q9HBD1 RNA5SP436-201ENST00000516020 115 ntBASIC1.12□□□□□ -2.23
RC3H2Q9HBD1 RNA5SP255-201ENST00000516370 107 ntBASIC1.12□□□□□ -2.23
RC3H2Q9HBD1 MIR5000-201ENST00000577717 103 ntBASIC1.12□□□□□ -2.23
RC3H2Q9HBD1 AC211469.2-201ENST00000605461 205 ntBASIC1.12□□□□□ -2.23
RC3H2Q9HBD1 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
RC3H2Q9HBD1 MIR7107-201ENST00000611489 80 ntBASIC1.12□□□□□ -2.23
RC3H2Q9HBD1 uc_338.10-201ENST00000621872 182 ntBASIC1.12□□□□□ -2.23
RC3H2Q9HBD1 RNU6-1312P-201ENST00000362425 108 ntBASIC1.11□□□□□ -2.23
RC3H2Q9HBD1 RNU6-808P-201ENST00000391233 108 ntBASIC1.11□□□□□ -2.23
RC3H2Q9HBD1 AC006210.1-201ENST00000424882 111 ntBASIC1.11□□□□□ -2.23
RC3H2Q9HBD1 RNA5SP268-201ENST00000516828 124 ntBASIC1.11□□□□□ -2.23
RC3H2Q9HBD1 RNU4-38P-201ENST00000364472 129 ntBASIC1.1□□□□□ -2.23
RC3H2Q9HBD1 SNORA41B-201ENST00000384785 128 ntBASIC1.1□□□□□ -2.23
RC3H2Q9HBD1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.1□□□□□ -2.23
RC3H2Q9HBD1 SNORD99-201ENST00000408612 74 ntBASIC1.1□□□□□ -2.23
RC3H2Q9HBD1 RNA5SP94-201ENST00000516917 108 ntBASIC1.1□□□□□ -2.23
RC3H2Q9HBD1 AC011195.1-201ENST00000578177 177 ntBASIC1.1□□□□□ -2.23
RC3H2Q9HBD1 MIR3973-201ENST00000579824 107 ntBASIC1.1□□□□□ -2.23
RC3H2Q9HBD1 SNORA70.25-201ENST00000612741 95 ntBASIC1.1□□□□□ -2.23
RC3H2Q9HBD1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
RC3H2Q9HBD1 MIR532-201ENST00000385025 91 ntBASIC1.09□□□□□ -2.23
RC3H2Q9HBD1 RNU6-1246P-201ENST00000391064 107 ntBASIC1.09□□□□□ -2.23
RC3H2Q9HBD1 SNORD110-201ENST00000408189 75 ntBASIC1.09□□□□□ -2.23
RC3H2Q9HBD1 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
RC3H2Q9HBD1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.09□□□□□ -2.23
RC3H2Q9HBD1 AC090617.8-201ENST00000623339 167 ntBASIC1.09□□□□□ -2.23
RC3H2Q9HBD1 Y_RNA.325-201ENST00000365171 122 ntBASIC1.08□□□□□ -2.24
RC3H2Q9HBD1 MIR4661-201ENST00000582720 75 ntBASIC1.08□□□□□ -2.24
RC3H2Q9HBD1 RNU1-29P-201ENST00000606574 126 ntBASIC1.08□□□□□ -2.24
RC3H2Q9HBD1 MIR4752-201ENST00000579672 72 ntBASIC1.07□□□□□ -2.24
RC3H2Q9HBD1 MIR6857-201ENST00000613267 93 ntBASIC1.07□□□□□ -2.24
RC3H2Q9HBD1 Y_RNA.246-201ENST00000364495 108 ntBASIC1.06□□□□□ -2.24
RC3H2Q9HBD1 CYP3A137P-201ENST00000562436 69 ntBASIC1.06□□□□□ -2.24
RC3H2Q9HBD1 SNORA9.1-201ENST00000362412 131 ntBASIC1.05□□□□□ -2.24
RC3H2Q9HBD1 RNU6-520P-201ENST00000384717 104 ntBASIC1.05□□□□□ -2.24
RC3H2Q9HBD1 MIR516B1-201ENST00000385211 90 ntBASIC1.05□□□□□ -2.24
RC3H2Q9HBD1 HMGN2P22-201ENST00000427588 175 ntBASIC1.05□□□□□ -2.24
RC3H2Q9HBD1 CYP3A54P-201ENST00000566950 75 ntBASIC1.05□□□□□ -2.24
RC3H2Q9HBD1 MIR548AD-201ENST00000584780 82 ntBASIC1.05□□□□□ -2.24
RC3H2Q9HBD1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
RC3H2Q9HBD1 RNU4-45P-201ENST00000365469 141 ntBASIC1.03□□□□□ -2.24
RC3H2Q9HBD1 RNY1P8-201ENST00000383970 114 ntBASIC1.03□□□□□ -2.24
RC3H2Q9HBD1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.02□□□□□ -2.25
RC3H2Q9HBD1 U6.96-201ENST00000636425 70 ntBASIC1.02□□□□□ -2.25
RC3H2Q9HBD1 RNU6-231P-201ENST00000517122 103 ntBASIC1.01□□□□□ -2.25
RC3H2Q9HBD1 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
RC3H2Q9HBD1 RNA5SP222-201ENST00000411039 105 ntBASIC1□□□□□ -2.25
RC3H2Q9HBD1 RNU4-88P-201ENST00000411220 86 ntBASIC1□□□□□ -2.25
RC3H2Q9HBD1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
RC3H2Q9HBD1 AC243829.3-201ENST00000622177 108 ntBASIC1□□□□□ -2.25
RC3H2Q9HBD1 RNA5SP325-201ENST00000363756 130 ntBASIC0.99□□□□□ -2.25
RC3H2Q9HBD1 AL021921.1-201ENST00000442774 93 ntBASIC0.99□□□□□ -2.25
RC3H2Q9HBD1 RNU6-518P-201ENST00000516056 96 ntBASIC0.99□□□□□ -2.25
RC3H2Q9HBD1 MIR548AG1-201ENST00000579932 66 ntBASIC0.99□□□□□ -2.25
RC3H2Q9HBD1 AL353765.1-201ENST00000605514 183 ntBASIC0.99□□□□□ -2.25
RC3H2Q9HBD1 Y_RNA.379-201ENST00000365653 102 ntBASIC0.98□□□□□ -2.25
RC3H2Q9HBD1 SNORD116-16-201ENST00000384533 92 ntBASIC0.98□□□□□ -2.25
RC3H2Q9HBD1 SNORA49-201ENST00000386157 136 ntBASIC0.98□□□□□ -2.25
RC3H2Q9HBD1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.98□□□□□ -2.25
RC3H2Q9HBD1 AC243829.6-201ENST00000612652 106 ntBASIC0.98□□□□□ -2.25
RC3H2Q9HBD1 Y_RNA.74-201ENST00000362911 99 ntBASIC0.97□□□□□ -2.25
RC3H2Q9HBD1 RNA5SP517-201ENST00000364724 117 ntBASIC0.97□□□□□ -2.25
RC3H2Q9HBD1 MIR519A2-201ENST00000384990 87 ntBASIC0.97□□□□□ -2.25
RC3H2Q9HBD1 RNU6-337P-201ENST00000391243 106 ntBASIC0.97□□□□□ -2.25
RC3H2Q9HBD1 MIR1255B2-201ENST00000408618 67 ntBASIC0.97□□□□□ -2.25
RC3H2Q9HBD1 AC244090.1-201ENST00000441884 93 ntBASIC0.97□□□□□ -2.25
RC3H2Q9HBD1 AC069271.1-201ENST00000445577 156 ntBASIC0.97□□□□□ -2.25
RC3H2Q9HBD1 RNU7-119P-201ENST00000459279 63 ntBASIC0.97□□□□□ -2.25
RC3H2Q9HBD1 RNU6-980P-201ENST00000516925 103 ntBASIC0.97□□□□□ -2.25
RC3H2Q9HBD1 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
RC3H2Q9HBD1 Y_RNA.282-201ENST00000364793 102 ntBASIC0.96□□□□□ -2.26
RC3H2Q9HBD1 MIR5706-201ENST00000579841 80 ntBASIC0.96□□□□□ -2.26
RC3H2Q9HBD1 MIR4714-201ENST00000580728 77 ntBASIC0.96□□□□□ -2.26
RC3H2Q9HBD1 MIR20A-201ENST00000362279 71 ntBASIC0.95□□□□□ -2.26
RC3H2Q9HBD1 MIR608-201ENST00000384820 100 ntBASIC0.95□□□□□ -2.26
RC3H2Q9HBD1 ACA64.5-201ENST00000516207 127 ntBASIC0.95□□□□□ -2.26
RC3H2Q9HBD1 SNORA40.16-201ENST00000517238 121 ntBASIC0.95□□□□□ -2.26
RC3H2Q9HBD1 SNORA25.18-201ENST00000607153 114 ntBASIC0.95□□□□□ -2.26
RC3H2Q9HBD1 RN7SL793P-201ENST00000583259 296 ntBASIC0.94□□□□□ -2.26
RC3H2Q9HBD1 RNU6-753P-201ENST00000363926 107 ntBASIC0.93□□□□□ -2.26
RC3H2Q9HBD1 SNORA36.2-201ENST00000384004 127 ntBASIC0.92□□□□□ -2.26
RC3H2Q9HBD1 SNORD116.2-201ENST00000391251 93 ntBASIC0.92□□□□□ -2.26
RC3H2Q9HBD1 RNU6-1232P-201ENST00000516299 86 ntBASIC0.92□□□□□ -2.26
RC3H2Q9HBD1 MIR6773-201ENST00000612812 74 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 210.2 ms