Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 RNU6-260P-201ENST00000384092 107 ntBASIC0.14□□□□□ -2.39
PCNX3Q9H6A9 MIR203A-201ENST00000384836 110 ntBASIC0.14□□□□□ -2.39
PCNX3Q9H6A9 RNU6-303P-201ENST00000517091 106 ntBASIC0.14□□□□□ -2.39
PCNX3Q9H6A9 MIR6739-201ENST00000622461 75 ntBASIC0.14□□□□□ -2.39
PCNX3Q9H6A9 RNU6-154P-201ENST00000384306 106 ntBASIC0.14□□□□□ -2.39
PCNX3Q9H6A9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
PCNX3Q9H6A9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
PCNX3Q9H6A9 MIR4773-1-201ENST00000637203 78 ntBASIC0.14□□□□□ -2.39
PCNX3Q9H6A9 RNU6-46P-201ENST00000383860 107 ntBASIC0.13□□□□□ -2.39
PCNX3Q9H6A9 Y_RNA.606-201ENST00000410579 103 ntBASIC0.13□□□□□ -2.39
PCNX3Q9H6A9 MIR3202-2-201ENST00000635980 79 ntBASIC0.13□□□□□ -2.39
PCNX3Q9H6A9 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.13□□□□□ -2.39
PCNX3Q9H6A9 RNU6-824P-201ENST00000363724 104 ntBASIC0.13□□□□□ -2.39
PCNX3Q9H6A9 RNU6-787P-201ENST00000384032 107 ntBASIC0.13□□□□□ -2.39
PCNX3Q9H6A9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.13□□□□□ -2.39
PCNX3Q9H6A9 RNU6-557P-201ENST00000516842 110 ntBASIC0.13□□□□□ -2.39
PCNX3Q9H6A9 SCARNA18B-201ENST00000458806 135 ntBASIC0.12□□□□□ -2.39
PCNX3Q9H6A9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.12□□□□□ -2.39
PCNX3Q9H6A9 MIR3657-201ENST00000584818 117 ntBASIC0.12□□□□□ -2.39
PCNX3Q9H6A9 RNA5SP98-201ENST00000363158 137 ntBASIC0.11□□□□□ -2.39
PCNX3Q9H6A9 Y_RNA.250-201ENST00000364542 110 ntBASIC0.11□□□□□ -2.39
PCNX3Q9H6A9 RNU6-382P-201ENST00000365181 106 ntBASIC0.11□□□□□ -2.39
PCNX3Q9H6A9 RNU7-188P-201ENST00000517063 64 ntBASIC0.11□□□□□ -2.39
PCNX3Q9H6A9 MIR6759-201ENST00000638110 65 ntBASIC0.11□□□□□ -2.39
PCNX3Q9H6A9 RNU6-478P-201ENST00000363904 110 ntBASIC0.11□□□□□ -2.39
PCNX3Q9H6A9 RNU6-815P-201ENST00000384080 113 ntBASIC0.11□□□□□ -2.39
PCNX3Q9H6A9 MIR593-201ENST00000384856 100 ntBASIC0.11□□□□□ -2.39
PCNX3Q9H6A9 MIR652-201ENST00000385278 98 ntBASIC0.11□□□□□ -2.39
PCNX3Q9H6A9 SNORD42B-201ENST00000458893 67 ntBASIC0.11□□□□□ -2.39
PCNX3Q9H6A9 RNU6-752P-201ENST00000516376 102 ntBASIC0.11□□□□□ -2.39
PCNX3Q9H6A9 MIR548AE1-201ENST00000583292 70 ntBASIC0.11□□□□□ -2.39
PCNX3Q9H6A9 RNU6-1094P-201ENST00000362416 104 ntBASIC0.1□□□□□ -2.39
PCNX3Q9H6A9 RNU6-315P-201ENST00000362666 107 ntBASIC0.1□□□□□ -2.39
PCNX3Q9H6A9 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
PCNX3Q9H6A9 CR383656.4-201ENST00000546909 122 ntBASIC0.1□□□□□ -2.39
PCNX3Q9H6A9 MIR1245B-201ENST00000636115 69 ntBASIC0.1□□□□□ -2.39
PCNX3Q9H6A9 Y_RNA.681-201ENST00000516445 113 ntBASIC0.09□□□□□ -2.39
PCNX3Q9H6A9 MIRLET7A1-201ENST00000362295 80 ntBASIC0.09□□□□□ -2.4
PCNX3Q9H6A9 RNU6-228P-201ENST00000362700 106 ntBASIC0.09□□□□□ -2.4
PCNX3Q9H6A9 SNORA15B-2-201ENST00000384058 135 ntBASIC0.09□□□□□ -2.4
PCNX3Q9H6A9 SNORA15B-1-201ENST00000384334 135 ntBASIC0.09□□□□□ -2.4
PCNX3Q9H6A9 RNU6-129P-201ENST00000391022 107 ntBASIC0.09□□□□□ -2.4
PCNX3Q9H6A9 RNA5SP163-201ENST00000410304 99 ntBASIC0.09□□□□□ -2.4
PCNX3Q9H6A9 AC244090.1-201ENST00000441884 93 ntBASIC0.09□□□□□ -2.4
PCNX3Q9H6A9 MIR4290-201ENST00000583807 95 ntBASIC0.09□□□□□ -2.4
PCNX3Q9H6A9 RNU6-686P-201ENST00000364839 107 ntBASIC0.08□□□□□ -2.4
PCNX3Q9H6A9 RNU6-242P-201ENST00000384359 107 ntBASIC0.08□□□□□ -2.4
PCNX3Q9H6A9 MIR145-201ENST00000384967 88 ntBASIC0.08□□□□□ -2.4
PCNX3Q9H6A9 RNU6-127P-201ENST00000390897 107 ntBASIC0.08□□□□□ -2.4
PCNX3Q9H6A9 SNORD90-201ENST00000391145 111 ntBASIC0.08□□□□□ -2.4
PCNX3Q9H6A9 RNU6-380P-201ENST00000410207 107 ntBASIC0.08□□□□□ -2.4
PCNX3Q9H6A9 SNORA72.7-201ENST00000516349 94 ntBASIC0.08□□□□□ -2.4
PCNX3Q9H6A9 MIR548E-201ENST00000408287 88 ntBASIC0.08□□□□□ -2.4
PCNX3Q9H6A9 RNU6-175P-201ENST00000516896 107 ntBASIC0.08□□□□□ -2.4
PCNX3Q9H6A9 RNU6-279P-201ENST00000391297 101 ntBASIC0.07□□□□□ -2.4
PCNX3Q9H6A9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.07□□□□□ -2.4
PCNX3Q9H6A9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
PCNX3Q9H6A9 MIR876-201ENST00000401147 81 ntBASIC0.06□□□□□ -2.4
PCNX3Q9H6A9 snoU13.13-201ENST00000458842 104 ntBASIC0.06□□□□□ -2.4
PCNX3Q9H6A9 RNU6-180P-201ENST00000516697 61 ntBASIC0.06□□□□□ -2.4
PCNX3Q9H6A9 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
PCNX3Q9H6A9 RNU6-573P-201ENST00000383938 106 ntBASIC0.06□□□□□ -2.4
PCNX3Q9H6A9 RNU6-1036P-201ENST00000383959 104 ntBASIC0.06□□□□□ -2.4
PCNX3Q9H6A9 RNU6-1162P-201ENST00000384443 104 ntBASIC0.06□□□□□ -2.4
PCNX3Q9H6A9 MIR329-2-201ENST00000385029 84 ntBASIC0.06□□□□□ -2.4
PCNX3Q9H6A9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.06□□□□□ -2.4
PCNX3Q9H6A9 SNORD115-22-201ENST00000364456 82 ntBASIC0.05□□□□□ -2.4
PCNX3Q9H6A9 RNU6-1039P-201ENST00000383931 107 ntBASIC0.05□□□□□ -2.4
PCNX3Q9H6A9 RNU6-1124P-201ENST00000384169 107 ntBASIC0.05□□□□□ -2.4
PCNX3Q9H6A9 RNU7-165P-201ENST00000458864 60 ntBASIC0.05□□□□□ -2.4
PCNX3Q9H6A9 RNU6-70P-201ENST00000516438 60 ntBASIC0.05□□□□□ -2.4
PCNX3Q9H6A9 RNA5SP147-201ENST00000516493 109 ntBASIC0.05□□□□□ -2.4
PCNX3Q9H6A9 U6.81-201ENST00000612550 106 ntBASIC0.05□□□□□ -2.4
PCNX3Q9H6A9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
PCNX3Q9H6A9 Y_RNA.94-201ENST00000363068 106 ntBASIC0.04□□□□□ -2.4
PCNX3Q9H6A9 Y_RNA.178-201ENST00000363832 102 ntBASIC0.04□□□□□ -2.4
PCNX3Q9H6A9 MIR154-201ENST00000385243 84 ntBASIC0.04□□□□□ -2.4
PCNX3Q9H6A9 SNORD78.1-201ENST00000390866 65 ntBASIC0.04□□□□□ -2.4
PCNX3Q9H6A9 AC074348.1-201ENST00000426503 132 ntBASIC0.04□□□□□ -2.4
PCNX3Q9H6A9 MIR5190-201ENST00000581537 80 ntBASIC0.04□□□□□ -2.4
PCNX3Q9H6A9 SNORA8.1-201ENST00000384250 140 ntBASIC0.03□□□□□ -2.4
PCNX3Q9H6A9 RNA5SP476-201ENST00000516613 103 ntBASIC0.03□□□□□ -2.4
PCNX3Q9H6A9 RNU6-807P-201ENST00000516805 107 ntBASIC0.03□□□□□ -2.4
PCNX3Q9H6A9 RN7SL660P-201ENST00000614852 299 ntBASIC0.03□□□□□ -2.4
PCNX3Q9H6A9 RNU6-929P-201ENST00000384429 107 ntBASIC0.03□□□□□ -2.41
PCNX3Q9H6A9 MIR1295B-201ENST00000636144 60 ntBASIC0.03□□□□□ -2.41
PCNX3Q9H6A9 Y_RNA.219-201ENST00000364232 113 ntBASIC0.02□□□□□ -2.41
PCNX3Q9H6A9 Y_RNA.316-201ENST00000365118 111 ntBASIC0.02□□□□□ -2.41
PCNX3Q9H6A9 MIR8053-201ENST00000613344 75 ntBASIC0.02□□□□□ -2.41
PCNX3Q9H6A9 Y_RNA.532-201ENST00000384590 113 ntBASIC0.01□□□□□ -2.41
PCNX3Q9H6A9 MIR4712-201ENST00000583750 82 ntBASIC0.01□□□□□ -2.41
PCNX3Q9H6A9 Y_RNA.68-201ENST00000362881 102 ntBASIC0.01□□□□□ -2.41
PCNX3Q9H6A9 SNORA2.1-201ENST00000363089 137 ntBASIC0.01□□□□□ -2.41
PCNX3Q9H6A9 SNORD114-12-201ENST00000365400 75 ntBASIC0.01□□□□□ -2.41
PCNX3Q9H6A9 MIRLET7B-201ENST00000385140 83 ntBASIC0.01□□□□□ -2.41
PCNX3Q9H6A9 SNORA49-201ENST00000386157 136 ntBASIC0.01□□□□□ -2.41
PCNX3Q9H6A9 AP000676.1-201ENST00000533307 52 ntBASIC0.01□□□□□ -2.41
PCNX3Q9H6A9 MIR5589-201ENST00000579442 60 ntBASIC0.01□□□□□ -2.41
PCNX3Q9H6A9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.01□□□□□ -2.41
PCNX3Q9H6A9 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 264.1 ms