Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 MIR876-201ENST00000401147 81 ntBASIC0.17□□□□□ -2.38
PIF1Q9H611 MIR548H2-201ENST00000408874 88 ntBASIC0.17□□□□□ -2.38
PIF1Q9H611 RNU6-303P-201ENST00000517091 106 ntBASIC0.17□□□□□ -2.38
PIF1Q9H611 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
PIF1Q9H611 RNA5SP214-201ENST00000363378 118 ntBASIC0.16□□□□□ -2.38
PIF1Q9H611 AC244090.1-201ENST00000441884 93 ntBASIC0.16□□□□□ -2.38
PIF1Q9H611 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.16□□□□□ -2.38
PIF1Q9H611 MIR4712-201ENST00000583750 82 ntBASIC0.16□□□□□ -2.38
PIF1Q9H611 RN7SL660P-201ENST00000614852 299 ntBASIC0.16□□□□□ -2.38
PIF1Q9H611 MIR3202-2-201ENST00000635980 79 ntBASIC0.16□□□□□ -2.38
PIF1Q9H611 Y_RNA.219-201ENST00000364232 113 ntBASIC0.15□□□□□ -2.39
PIF1Q9H611 Y_RNA.540-201ENST00000384638 111 ntBASIC0.15□□□□□ -2.39
PIF1Q9H611 MIR593-201ENST00000384856 100 ntBASIC0.15□□□□□ -2.39
PIF1Q9H611 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
PIF1Q9H611 MIR4514-201ENST00000581410 57 ntBASIC0.15□□□□□ -2.39
PIF1Q9H611 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
PIF1Q9H611 MIR6779-201ENST00000617283 64 ntBASIC0.15□□□□□ -2.39
PIF1Q9H611 RNU6-1094P-201ENST00000362416 104 ntBASIC0.14□□□□□ -2.39
PIF1Q9H611 MIR582-201ENST00000365731 98 ntBASIC0.14□□□□□ -2.39
PIF1Q9H611 RNU6-260P-201ENST00000384092 107 ntBASIC0.14□□□□□ -2.39
PIF1Q9H611 RNU6-1124P-201ENST00000384169 107 ntBASIC0.14□□□□□ -2.39
PIF1Q9H611 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
PIF1Q9H611 RNA5SP163-201ENST00000410304 99 ntBASIC0.14□□□□□ -2.39
PIF1Q9H611 RNU6-752P-201ENST00000516376 102 ntBASIC0.14□□□□□ -2.39
PIF1Q9H611 MIR4484-201ENST00000582855 83 ntBASIC0.14□□□□□ -2.39
PIF1Q9H611 MIR8087-201ENST00000612745 78 ntBASIC0.14□□□□□ -2.39
PIF1Q9H611 MIR330-201ENST00000362196 94 ntBASIC0.13□□□□□ -2.39
PIF1Q9H611 MIR548E-201ENST00000408287 88 ntBASIC0.13□□□□□ -2.39
PIF1Q9H611 RNU6-807P-201ENST00000516805 107 ntBASIC0.13□□□□□ -2.39
PIF1Q9H611 RNU6-175P-201ENST00000516896 107 ntBASIC0.13□□□□□ -2.39
PIF1Q9H611 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
PIF1Q9H611 Y_RNA.532-201ENST00000384590 113 ntBASIC0.12□□□□□ -2.39
PIF1Q9H611 SNORA72.7-201ENST00000516349 94 ntBASIC0.12□□□□□ -2.39
PIF1Q9H611 MIR6514-201ENST00000622549 70 ntBASIC0.12□□□□□ -2.39
PIF1Q9H611 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.12□□□□□ -2.39
PIF1Q9H611 RNU6-228P-201ENST00000362700 106 ntBASIC0.11□□□□□ -2.39
PIF1Q9H611 SNORD114-5-201ENST00000362928 70 ntBASIC0.11□□□□□ -2.39
PIF1Q9H611 Y_RNA.94-201ENST00000363068 106 ntBASIC0.11□□□□□ -2.39
PIF1Q9H611 MIR145-201ENST00000384967 88 ntBASIC0.11□□□□□ -2.39
PIF1Q9H611 AC074348.1-201ENST00000426503 132 ntBASIC0.11□□□□□ -2.39
PIF1Q9H611 RNA5SP147-201ENST00000516493 109 ntBASIC0.11□□□□□ -2.39
PIF1Q9H611 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.11□□□□□ -2.39
PIF1Q9H611 MIR3657-201ENST00000584818 117 ntBASIC0.11□□□□□ -2.39
PIF1Q9H611 AC023932.2-201ENST00000603176 175 ntBASIC0.11□□□□□ -2.39
PIF1Q9H611 MIR1297-201ENST00000637311 77 ntBASIC0.11□□□□□ -2.39
PIF1Q9H611 RNU6-330P-201ENST00000363015 107 ntBASIC0.1□□□□□ -2.39
PIF1Q9H611 RNU6-1036P-201ENST00000383959 104 ntBASIC0.1□□□□□ -2.39
PIF1Q9H611 MIR1255A-201ENST00000408338 113 ntBASIC0.1□□□□□ -2.39
PIF1Q9H611 MIR1197-201ENST00000408818 88 ntBASIC0.1□□□□□ -2.39
PIF1Q9H611 SNORA63.6-201ENST00000364921 119 ntBASIC0.09□□□□□ -2.4
PIF1Q9H611 SNORD78.1-201ENST00000390866 65 ntBASIC0.09□□□□□ -2.4
PIF1Q9H611 snoU13.13-201ENST00000458842 104 ntBASIC0.09□□□□□ -2.4
PIF1Q9H611 AC021146.9-201ENST00000512503 156 ntBASIC0.09□□□□□ -2.4
PIF1Q9H611 MIR6718-201ENST00000616153 80 ntBASIC0.09□□□□□ -2.4
PIF1Q9H611 SNORA2.1-201ENST00000363089 137 ntBASIC0.08□□□□□ -2.4
PIF1Q9H611 Y_RNA.115-201ENST00000363272 98 ntBASIC0.08□□□□□ -2.4
PIF1Q9H611 SNORA8.1-201ENST00000384250 140 ntBASIC0.08□□□□□ -2.4
PIF1Q9H611 MIR106A-201ENST00000384870 81 ntBASIC0.08□□□□□ -2.4
PIF1Q9H611 MIR3675-201ENST00000583661 73 ntBASIC0.08□□□□□ -2.4
PIF1Q9H611 RNA5SP63-201ENST00000391225 112 ntBASIC0.07□□□□□ -2.4
PIF1Q9H611 SNORD2-201ENST00000459163 69 ntBASIC0.07□□□□□ -2.4
PIF1Q9H611 RNU7-159P-201ENST00000459284 62 ntBASIC0.07□□□□□ -2.4
PIF1Q9H611 RNU6-180P-201ENST00000516697 61 ntBASIC0.07□□□□□ -2.4
PIF1Q9H611 RNA5SP330-201ENST00000517096 96 ntBASIC0.07□□□□□ -2.4
PIF1Q9H611 SNORA40.17-201ENST00000517256 115 ntBASIC0.07□□□□□ -2.4
PIF1Q9H611 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.07□□□□□ -2.4
PIF1Q9H611 RNA5SP457-201ENST00000363657 124 ntBASIC0.06□□□□□ -2.4
PIF1Q9H611 AC104692.1-201ENST00000472406 90 ntBASIC0.06□□□□□ -2.4
PIF1Q9H611 CR383656.4-201ENST00000546909 122 ntBASIC0.06□□□□□ -2.4
PIF1Q9H611 RNA5SP98-201ENST00000363158 137 ntBASIC0.04□□□□□ -2.4
PIF1Q9H611 SNORA49-201ENST00000386157 136 ntBASIC0.04□□□□□ -2.4
PIF1Q9H611 SCARNA18B-201ENST00000458806 135 ntBASIC0.04□□□□□ -2.4
PIF1Q9H611 RNU7-165P-201ENST00000458864 60 ntBASIC0.04□□□□□ -2.4
PIF1Q9H611 MIR1295B-201ENST00000636144 60 ntBASIC0.04□□□□□ -2.4
PIF1Q9H611 MIR4768-201ENST00000585270 74 ntBASIC0.03□□□□□ -2.4
PIF1Q9H611 AL109933.3-201ENST00000619095 188 ntBASIC0.03□□□□□ -2.4
PIF1Q9H611 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.03□□□□□ -2.4
PIF1Q9H611 MIR148A-201ENST00000362215 68 ntBASIC0.02□□□□□ -2.41
PIF1Q9H611 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
PIF1Q9H611 RNA5SP225-201ENST00000410874 135 ntBASIC0.02□□□□□ -2.41
PIF1Q9H611 AP000676.1-201ENST00000533307 52 ntBASIC0.02□□□□□ -2.41
PIF1Q9H611 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.02□□□□□ -2.41
PIF1Q9H611 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
PIF1Q9H611 Y_RNA.250-201ENST00000364542 110 ntBASIC0.01□□□□□ -2.41
PIF1Q9H611 RNU6-929P-201ENST00000384429 107 ntBASIC0.01□□□□□ -2.41
PIF1Q9H611 RNU6-857P-201ENST00000515893 110 ntBASIC0.01□□□□□ -2.41
PIF1Q9H611 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
PIF1Q9H611 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
PIF1Q9H611 SNORD115-25-201ENST00000362619 82 ntBASIC0□□□□□ -2.41
PIF1Q9H611 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
PIF1Q9H611 SNORD45.1-201ENST00000363181 77 ntBASIC0□□□□□ -2.41
PIF1Q9H611 RNU6-279P-201ENST00000391297 101 ntBASIC0□□□□□ -2.41
PIF1Q9H611 Y_RNA.633-201ENST00000459107 95 ntBASIC0□□□□□ -2.41
PIF1Q9H611 MIR664A-201ENST00000626086 82 ntBASIC0□□□□□ -2.41
PIF1Q9H611 U6.96-201ENST00000636425 70 ntBASIC0□□□□□ -2.41
PIF1Q9H611 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.01□□□□□ -2.41
PIF1Q9H611 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.01□□□□□ -2.41
PIF1Q9H611 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.01□□□□□ -2.41
PIF1Q9H611 RNU6-24P-201ENST00000384440 107 ntBASIC-0.02□□□□□ -2.41
PIF1Q9H611 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 278.7 ms