Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 MIR4773-1-201ENST00000637203 78 ntBASIC-0.15□□□□□ -2.43
NUP88Q99567 RNU6-46P-201ENST00000383860 107 ntBASIC-0.16□□□□□ -2.44
NUP88Q99567 AL450471.1-201ENST00000447509 127 ntBASIC-0.16□□□□□ -2.44
NUP88Q99567 SNORA40.17-201ENST00000517256 115 ntBASIC-0.16□□□□□ -2.44
NUP88Q99567 RNU6-495P-201ENST00000362995 107 ntBASIC-0.17□□□□□ -2.44
NUP88Q99567 SNORA32.1-201ENST00000364514 115 ntBASIC-0.17□□□□□ -2.44
NUP88Q99567 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
NUP88Q99567 MIR548E-201ENST00000408287 88 ntBASIC-0.17□□□□□ -2.44
NUP88Q99567 SNORD75.2-201ENST00000408784 58 ntBASIC-0.17□□□□□ -2.44
NUP88Q99567 snoU13.17-201ENST00000458802 104 ntBASIC-0.18□□□□□ -2.44
NUP88Q99567 RNU6-844P-201ENST00000517175 102 ntBASIC-0.18□□□□□ -2.44
NUP88Q99567 RNA5SP368-201ENST00000364298 116 ntBASIC-0.19□□□□□ -2.44
NUP88Q99567 MIR604-201ENST00000384880 94 ntBASIC-0.19□□□□□ -2.44
NUP88Q99567 MIR4645-201ENST00000583158 77 ntBASIC-0.19□□□□□ -2.44
NUP88Q99567 SNORA18.1-201ENST00000363418 128 ntBASIC-0.2□□□□□ -2.44
NUP88Q99567 SNORD114-15-201ENST00000364687 72 ntBASIC-0.2□□□□□ -2.44
NUP88Q99567 RNU6-382P-201ENST00000365181 106 ntBASIC-0.2□□□□□ -2.44
NUP88Q99567 AC093729.1-201ENST00000513074 128 ntBASIC-0.2□□□□□ -2.44
NUP88Q99567 RNU6-267P-201ENST00000516714 103 ntBASIC-0.2□□□□□ -2.44
NUP88Q99567 RNU6-219P-201ENST00000364728 107 ntBASIC-0.21□□□□□ -2.44
NUP88Q99567 RNU6-497P-201ENST00000365316 104 ntBASIC-0.21□□□□□ -2.44
NUP88Q99567 SNORD114-12-201ENST00000365400 75 ntBASIC-0.21□□□□□ -2.44
NUP88Q99567 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.21□□□□□ -2.44
NUP88Q99567 SNORD2-201ENST00000459163 69 ntBASIC-0.21□□□□□ -2.44
NUP88Q99567 RNU6-274P-201ENST00000459566 107 ntBASIC-0.21□□□□□ -2.44
NUP88Q99567 RNU6-208P-201ENST00000362431 107 ntBASIC-0.22□□□□□ -2.44
NUP88Q99567 RNU6-824P-201ENST00000363724 104 ntBASIC-0.22□□□□□ -2.44
NUP88Q99567 RNU6-30P-201ENST00000384561 107 ntBASIC-0.22□□□□□ -2.44
NUP88Q99567 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
NUP88Q99567 RNU7-24P-201ENST00000458867 62 ntBASIC-0.22□□□□□ -2.44
NUP88Q99567 AP000676.1-201ENST00000533307 52 ntBASIC-0.22□□□□□ -2.44
NUP88Q99567 RNU6-990P-201ENST00000364385 104 ntBASIC-0.23□□□□□ -2.45
NUP88Q99567 SNORD49B-201ENST00000365172 72 ntBASIC-0.23□□□□□ -2.45
NUP88Q99567 RNU6-49P-201ENST00000384256 107 ntBASIC-0.23□□□□□ -2.45
NUP88Q99567 AC108676.2-201ENST00000605225 163 ntBASIC-0.23□□□□□ -2.45
NUP88Q99567 MIR101-1-201ENST00000362265 75 ntBASIC-0.24□□□□□ -2.45
NUP88Q99567 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.24□□□□□ -2.45
NUP88Q99567 MIR9-2-201ENST00000384838 87 ntBASIC-0.24□□□□□ -2.45
NUP88Q99567 SNORD4A-201ENST00000459174 72 ntBASIC-0.24□□□□□ -2.45
NUP88Q99567 AL590491.3-201ENST00000610731 82 ntBASIC-0.24□□□□□ -2.45
NUP88Q99567 MIR548BB-201ENST00000626714 66 ntBASIC-0.24□□□□□ -2.45
NUP88Q99567 SNORD77.2-201ENST00000391045 68 ntBASIC-0.25□□□□□ -2.45
NUP88Q99567 AL691482.2-201ENST00000457453 84 ntBASIC-0.25□□□□□ -2.45
NUP88Q99567 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.25□□□□□ -2.45
NUP88Q99567 IGLL4P-201ENST00000614590 133 ntBASIC-0.25□□□□□ -2.45
NUP88Q99567 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.26□□□□□ -2.45
NUP88Q99567 SNORD114-28-201ENST00000363610 72 ntBASIC-0.26□□□□□ -2.45
NUP88Q99567 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.26□□□□□ -2.45
NUP88Q99567 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.26□□□□□ -2.45
NUP88Q99567 SNORD95.1-201ENST00000364099 68 ntBASIC-0.27□□□□□ -2.45
NUP88Q99567 SNORA63.6-201ENST00000364921 119 ntBASIC-0.27□□□□□ -2.45
NUP88Q99567 MIR6509-201ENST00000614603 85 ntBASIC-0.28□□□□□ -2.45
NUP88Q99567 SNORD115-25-201ENST00000362619 82 ntBASIC-0.29□□□□□ -2.46
NUP88Q99567 RNY1P1-201ENST00000364372 112 ntBASIC-0.29□□□□□ -2.46
NUP88Q99567 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.29□□□□□ -2.46
NUP88Q99567 RNU6-455P-201ENST00000384681 107 ntBASIC-0.29□□□□□ -2.46
NUP88Q99567 AC021146.9-201ENST00000512503 156 ntBASIC-0.29□□□□□ -2.46
NUP88Q99567 MIR3666-201ENST00000607845 111 ntBASIC-0.29□□□□□ -2.46
NUP88Q99567 U6.81-201ENST00000612550 106 ntBASIC-0.29□□□□□ -2.46
NUP88Q99567 RNU6-502P-201ENST00000362419 108 ntBASIC-0.3□□□□□ -2.46
NUP88Q99567 RNU6-681P-201ENST00000364012 104 ntBASIC-0.3□□□□□ -2.46
NUP88Q99567 SNORD56B-201ENST00000384713 71 ntBASIC-0.3□□□□□ -2.46
NUP88Q99567 MIR203A-201ENST00000384836 110 ntBASIC-0.3□□□□□ -2.46
NUP88Q99567 RNU6-337P-201ENST00000391243 106 ntBASIC-0.3□□□□□ -2.46
NUP88Q99567 MIR4263-201ENST00000584745 83 ntBASIC-0.3□□□□□ -2.46
NUP88Q99567 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.31□□□□□ -2.46
NUP88Q99567 RNA5SP300-201ENST00000391197 107 ntBASIC-0.31□□□□□ -2.46
NUP88Q99567 RNA5SP451-201ENST00000410588 110 ntBASIC-0.31□□□□□ -2.46
NUP88Q99567 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.31□□□□□ -2.46
NUP88Q99567 RNU7-55P-201ENST00000459426 62 ntBASIC-0.31□□□□□ -2.46
NUP88Q99567 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.31□□□□□ -2.46
NUP88Q99567 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.32□□□□□ -2.46
NUP88Q99567 RNU6-260P-201ENST00000384092 107 ntBASIC-0.32□□□□□ -2.46
NUP88Q99567 RNU6-675P-201ENST00000384236 104 ntBASIC-0.32□□□□□ -2.46
NUP88Q99567 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.32□□□□□ -2.46
NUP88Q99567 RNU6-592P-201ENST00000411333 103 ntBASIC-0.32□□□□□ -2.46
NUP88Q99567 AC090617.8-201ENST00000623339 167 ntBASIC-0.32□□□□□ -2.46
NUP88Q99567 RNU6-900P-201ENST00000384498 102 ntBASIC-0.33□□□□□ -2.46
NUP88Q99567 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.33□□□□□ -2.46
NUP88Q99567 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.33□□□□□ -2.46
NUP88Q99567 RPS29P8-201ENST00000445109 171 ntBASIC-0.33□□□□□ -2.46
NUP88Q99567 snoU13.13-201ENST00000458842 104 ntBASIC-0.33□□□□□ -2.46
NUP88Q99567 RNA5SP147-201ENST00000516493 109 ntBASIC-0.33□□□□□ -2.46
NUP88Q99567 AC140658.3-201ENST00000567603 271 ntBASIC-0.33□□□□□ -2.46
NUP88Q99567 MIR8064-201ENST00000612863 90 ntBASIC-0.33□□□□□ -2.46
NUP88Q99567 SNORD114-11-201ENST00000363738 75 ntBASIC-0.34□□□□□ -2.46
NUP88Q99567 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.34□□□□□ -2.46
NUP88Q99567 AC006160.2-201ENST00000637708 154 ntBASIC-0.34□□□□□ -2.46
NUP88Q99567 RNU6-340P-201ENST00000364005 107 ntBASIC-0.35□□□□□ -2.47
NUP88Q99567 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
NUP88Q99567 MIR6773-201ENST00000612812 74 ntBASIC-0.35□□□□□ -2.47
NUP88Q99567 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.36□□□□□ -2.47
NUP88Q99567 RNU6-624P-201ENST00000363411 107 ntBASIC-0.36□□□□□ -2.47
NUP88Q99567 RNU6-294P-201ENST00000364999 102 ntBASIC-0.36□□□□□ -2.47
NUP88Q99567 MIR4280-201ENST00000582178 76 ntBASIC-0.36□□□□□ -2.47
NUP88Q99567 YWHAEP3-201ENST00000582767 121 ntBASIC-0.36□□□□□ -2.47
NUP88Q99567 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.36□□□□□ -2.47
NUP88Q99567 RNU6-901P-201ENST00000384593 106 ntBASIC-0.37□□□□□ -2.47
NUP88Q99567 MIR3657-201ENST00000584818 117 ntBASIC-0.37□□□□□ -2.47
NUP88Q99567 MIR4788-201ENST00000639104 80 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms