Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MIR3134-201ENST00000579433 74 ntBASIC0.65□□□□□ -2.31
CHAMP1Q96JM3 MIR548AE1-201ENST00000583292 70 ntBASIC0.65□□□□□ -2.31
CHAMP1Q96JM3 AC243829.6-201ENST00000612652 106 ntBASIC0.65□□□□□ -2.31
CHAMP1Q96JM3 RNA5SP331-201ENST00000364986 107 ntBASIC0.64□□□□□ -2.31
CHAMP1Q96JM3 RNU6-274P-201ENST00000459566 107 ntBASIC0.64□□□□□ -2.31
CHAMP1Q96JM3 RNU6-776P-201ENST00000364403 104 ntBASIC0.63□□□□□ -2.31
CHAMP1Q96JM3 RNU6-1022P-201ENST00000365049 104 ntBASIC0.63□□□□□ -2.31
CHAMP1Q96JM3 SNORA2A-201ENST00000383885 135 ntBASIC0.63□□□□□ -2.31
CHAMP1Q96JM3 RNU6-1039P-201ENST00000383931 107 ntBASIC0.63□□□□□ -2.31
CHAMP1Q96JM3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.63□□□□□ -2.31
CHAMP1Q96JM3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.63□□□□□ -2.31
CHAMP1Q96JM3 SNORA68.3-201ENST00000515906 83 ntBASIC0.63□□□□□ -2.31
CHAMP1Q96JM3 MIR4802-201ENST00000581881 80 ntBASIC0.63□□□□□ -2.31
CHAMP1Q96JM3 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.63□□□□□ -2.31
CHAMP1Q96JM3 RNU6-523P-201ENST00000516304 54 ntBASIC0.62□□□□□ -2.31
CHAMP1Q96JM3 RNU6-752P-201ENST00000516376 102 ntBASIC0.62□□□□□ -2.31
CHAMP1Q96JM3 SNORA40.17-201ENST00000517256 115 ntBASIC0.62□□□□□ -2.31
CHAMP1Q96JM3 MIR4473-201ENST00000583731 91 ntBASIC0.62□□□□□ -2.31
CHAMP1Q96JM3 MIR664A-201ENST00000626086 82 ntBASIC0.62□□□□□ -2.31
CHAMP1Q96JM3 MIR4662A-201ENST00000637499 67 ntBASIC0.62□□□□□ -2.31
CHAMP1Q96JM3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CHAMP1Q96JM3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.61□□□□□ -2.31
CHAMP1Q96JM3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.61□□□□□ -2.31
CHAMP1Q96JM3 MIR3675-201ENST00000583661 73 ntBASIC0.61□□□□□ -2.31
CHAMP1Q96JM3 MIR652-201ENST00000385278 98 ntBASIC0.6□□□□□ -2.31
CHAMP1Q96JM3 MIR889-201ENST00000401280 79 ntBASIC0.6□□□□□ -2.31
CHAMP1Q96JM3 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.6□□□□□ -2.31
CHAMP1Q96JM3 RNU6-863P-201ENST00000515989 104 ntBASIC0.6□□□□□ -2.31
CHAMP1Q96JM3 SNORA8.1-201ENST00000384250 140 ntBASIC0.59□□□□□ -2.31
CHAMP1Q96JM3 AL691482.2-201ENST00000457453 84 ntBASIC0.59□□□□□ -2.31
CHAMP1Q96JM3 uc_338.17-201ENST00000619633 179 ntBASIC0.59□□□□□ -2.31
CHAMP1Q96JM3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
CHAMP1Q96JM3 MIR103A1-201ENST00000362165 78 ntBASIC0.58□□□□□ -2.32
CHAMP1Q96JM3 MIR501-201ENST00000390204 84 ntBASIC0.58□□□□□ -2.32
CHAMP1Q96JM3 MIR6509-201ENST00000614603 85 ntBASIC0.58□□□□□ -2.32
CHAMP1Q96JM3 MIRLET7D-201ENST00000362263 87 ntBASIC0.57□□□□□ -2.32
CHAMP1Q96JM3 SNORD114-4-201ENST00000363962 75 ntBASIC0.57□□□□□ -2.32
CHAMP1Q96JM3 RNU6-990P-201ENST00000364385 104 ntBASIC0.57□□□□□ -2.32
CHAMP1Q96JM3 RNU6-260P-201ENST00000384092 107 ntBASIC0.57□□□□□ -2.32
CHAMP1Q96JM3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
CHAMP1Q96JM3 MIR203A-201ENST00000384836 110 ntBASIC0.56□□□□□ -2.32
CHAMP1Q96JM3 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
CHAMP1Q96JM3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.56□□□□□ -2.32
CHAMP1Q96JM3 RNU6-70P-201ENST00000516438 60 ntBASIC0.56□□□□□ -2.32
CHAMP1Q96JM3 MIR3657-201ENST00000584818 117 ntBASIC0.56□□□□□ -2.32
CHAMP1Q96JM3 uc_338.10-201ENST00000621872 182 ntBASIC0.56□□□□□ -2.32
CHAMP1Q96JM3 Y_RNA.185-201ENST00000363894 100 ntBASIC0.55□□□□□ -2.32
CHAMP1Q96JM3 MIR760-201ENST00000390220 80 ntBASIC0.55□□□□□ -2.32
CHAMP1Q96JM3 RNU6-687P-201ENST00000516443 89 ntBASIC0.55□□□□□ -2.32
CHAMP1Q96JM3 MIR4677-201ENST00000584153 80 ntBASIC0.55□□□□□ -2.32
CHAMP1Q96JM3 MIR548AD-201ENST00000584780 82 ntBASIC0.55□□□□□ -2.32
CHAMP1Q96JM3 AC023932.2-201ENST00000603176 175 ntBASIC0.55□□□□□ -2.32
CHAMP1Q96JM3 RNA5SP98-201ENST00000363158 137 ntBASIC0.54□□□□□ -2.32
CHAMP1Q96JM3 RNA5SP128-201ENST00000365305 116 ntBASIC0.54□□□□□ -2.32
CHAMP1Q96JM3 RNU6-1296P-201ENST00000383879 107 ntBASIC0.54□□□□□ -2.32
CHAMP1Q96JM3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
CHAMP1Q96JM3 U7.6-201ENST00000610841 64 ntBASIC0.54□□□□□ -2.32
CHAMP1Q96JM3 RNU6-411P-201ENST00000384451 107 ntBASIC0.53□□□□□ -2.32
CHAMP1Q96JM3 RNU6-1015P-201ENST00000517121 99 ntBASIC0.52□□□□□ -2.33
CHAMP1Q96JM3 RNA5SP368-201ENST00000364298 116 ntBASIC0.51□□□□□ -2.33
CHAMP1Q96JM3 MIR582-201ENST00000365731 98 ntBASIC0.51□□□□□ -2.33
CHAMP1Q96JM3 RNU6-1241P-201ENST00000384536 107 ntBASIC0.51□□□□□ -2.33
CHAMP1Q96JM3 SNORA2.1-201ENST00000363089 137 ntBASIC0.5□□□□□ -2.33
CHAMP1Q96JM3 SNORD115-22-201ENST00000364456 82 ntBASIC0.5□□□□□ -2.33
CHAMP1Q96JM3 RNU6-587P-201ENST00000391282 106 ntBASIC0.5□□□□□ -2.33
CHAMP1Q96JM3 MIR548E-201ENST00000408287 88 ntBASIC0.5□□□□□ -2.33
CHAMP1Q96JM3 MIR3925-201ENST00000584674 77 ntBASIC0.5□□□□□ -2.33
CHAMP1Q96JM3 MIR499B-201ENST00000636498 73 ntBASIC0.5□□□□□ -2.33
CHAMP1Q96JM3 SNORA9.1-201ENST00000362412 131 ntBASIC0.49□□□□□ -2.33
CHAMP1Q96JM3 SNORD45.1-201ENST00000363181 77 ntBASIC0.49□□□□□ -2.33
CHAMP1Q96JM3 RNU6-815P-201ENST00000384080 113 ntBASIC0.49□□□□□ -2.33
CHAMP1Q96JM3 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
CHAMP1Q96JM3 Y_RNA.545-201ENST00000384652 105 ntBASIC0.49□□□□□ -2.33
CHAMP1Q96JM3 MIR516B1-201ENST00000385211 90 ntBASIC0.49□□□□□ -2.33
CHAMP1Q96JM3 Y_RNA.565-201ENST00000384719 101 ntBASIC0.48□□□□□ -2.33
CHAMP1Q96JM3 RNA5SP25-201ENST00000410815 110 ntBASIC0.48□□□□□ -2.33
CHAMP1Q96JM3 RNA5SP67-201ENST00000516422 131 ntBASIC0.48□□□□□ -2.33
CHAMP1Q96JM3 IGLVI-20-201ENST00000519296 130 ntBASIC0.48□□□□□ -2.33
CHAMP1Q96JM3 Z95118.1-201ENST00000421372 247 ntBASIC0.47□□□□□ -2.33
CHAMP1Q96JM3 Y_RNA.633-201ENST00000459107 95 ntBASIC0.47□□□□□ -2.33
CHAMP1Q96JM3 RNU6-604P-201ENST00000390917 100 ntBASIC0.46□□□□□ -2.34
CHAMP1Q96JM3 AC244090.1-201ENST00000441884 93 ntBASIC0.46□□□□□ -2.34
CHAMP1Q96JM3 RNU6-175P-201ENST00000516896 107 ntBASIC0.46□□□□□ -2.34
CHAMP1Q96JM3 RNU7-188P-201ENST00000517063 64 ntBASIC0.46□□□□□ -2.34
CHAMP1Q96JM3 MIR20A-201ENST00000362279 71 ntBASIC0.45□□□□□ -2.34
CHAMP1Q96JM3 SNORD115-31-201ENST00000365318 82 ntBASIC0.45□□□□□ -2.34
CHAMP1Q96JM3 RNU6-634P-201ENST00000459134 106 ntBASIC0.45□□□□□ -2.34
CHAMP1Q96JM3 RNU6-758P-201ENST00000516292 89 ntBASIC0.45□□□□□ -2.34
CHAMP1Q96JM3 RNA5SP147-201ENST00000516493 109 ntBASIC0.45□□□□□ -2.34
CHAMP1Q96JM3 MIR6739-201ENST00000622461 75 ntBASIC0.45□□□□□ -2.34
CHAMP1Q96JM3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CHAMP1Q96JM3 MIR876-201ENST00000401147 81 ntBASIC0.44□□□□□ -2.34
CHAMP1Q96JM3 snoU13.13-201ENST00000458842 104 ntBASIC0.44□□□□□ -2.34
CHAMP1Q96JM3 AC108740.1-201ENST00000498629 225 ntBASIC0.44□□□□□ -2.34
CHAMP1Q96JM3 AC069113.3-201ENST00000521019 150 ntBASIC0.44□□□□□ -2.34
CHAMP1Q96JM3 MIR8053-201ENST00000613344 75 ntBASIC0.44□□□□□ -2.34
CHAMP1Q96JM3 AC090625.1-201ENST00000357130 210 ntBASIC0.43□□□□□ -2.34
CHAMP1Q96JM3 MIR409-201ENST00000362237 79 ntBASIC0.43□□□□□ -2.34
CHAMP1Q96JM3 Y_RNA.250-201ENST00000364542 110 ntBASIC0.43□□□□□ -2.34
CHAMP1Q96JM3 SNORD114-29-201ENST00000364819 70 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 222.4 ms