Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNU6-340P-201ENST00000364005 107 ntBASIC-0.14□□□□□ -2.43
CDK5RAP3Q96JB5 RNU6-681P-201ENST00000364012 104 ntBASIC-0.14□□□□□ -2.43
CDK5RAP3Q96JB5 MIR203A-201ENST00000384836 110 ntBASIC-0.14□□□□□ -2.43
CDK5RAP3Q96JB5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.14□□□□□ -2.43
CDK5RAP3Q96JB5 YWHAEP3-201ENST00000582767 121 ntBASIC-0.14□□□□□ -2.43
CDK5RAP3Q96JB5 RNU6-260P-201ENST00000384092 107 ntBASIC-0.15□□□□□ -2.43
CDK5RAP3Q96JB5 MIR1197-201ENST00000408818 88 ntBASIC-0.15□□□□□ -2.43
CDK5RAP3Q96JB5 SNORA63.6-201ENST00000364921 119 ntBASIC-0.16□□□□□ -2.44
CDK5RAP3Q96JB5 RNU6-46P-201ENST00000383860 107 ntBASIC-0.16□□□□□ -2.44
CDK5RAP3Q96JB5 SNORA49-201ENST00000386157 136 ntBASIC-0.16□□□□□ -2.44
CDK5RAP3Q96JB5 RNU6-129P-201ENST00000391022 107 ntBASIC-0.16□□□□□ -2.44
CDK5RAP3Q96JB5 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.16□□□□□ -2.44
CDK5RAP3Q96JB5 AC022137.1-201ENST00000483735 151 ntBASIC-0.16□□□□□ -2.44
CDK5RAP3Q96JB5 RNU6-557P-201ENST00000516842 110 ntBASIC-0.16□□□□□ -2.44
CDK5RAP3Q96JB5 AP000676.1-201ENST00000533307 52 ntBASIC-0.16□□□□□ -2.44
CDK5RAP3Q96JB5 MIR5190-201ENST00000581537 80 ntBASIC-0.16□□□□□ -2.44
CDK5RAP3Q96JB5 MIR6507-201ENST00000613630 70 ntBASIC-0.16□□□□□ -2.44
CDK5RAP3Q96JB5 RNU6-979P-201ENST00000383896 107 ntBASIC-0.17□□□□□ -2.44
CDK5RAP3Q96JB5 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.17□□□□□ -2.44
CDK5RAP3Q96JB5 MIR1295B-201ENST00000636144 60 ntBASIC-0.17□□□□□ -2.44
CDK5RAP3Q96JB5 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.17□□□□□ -2.44
CDK5RAP3Q96JB5 AC021146.9-201ENST00000512503 156 ntBASIC-0.18□□□□□ -2.44
CDK5RAP3Q96JB5 MIR7111-201ENST00000619751 72 ntBASIC-0.18□□□□□ -2.44
CDK5RAP3Q96JB5 SNORD115-25-201ENST00000362619 82 ntBASIC-0.19□□□□□ -2.44
CDK5RAP3Q96JB5 RNU6-686P-201ENST00000364839 107 ntBASIC-0.19□□□□□ -2.44
CDK5RAP3Q96JB5 snoU13.13-201ENST00000458842 104 ntBASIC-0.19□□□□□ -2.44
CDK5RAP3Q96JB5 RNU6-752P-201ENST00000516376 102 ntBASIC-0.19□□□□□ -2.44
CDK5RAP3Q96JB5 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.2□□□□□ -2.44
CDK5RAP3Q96JB5 RNU6-478P-201ENST00000363904 110 ntBASIC-0.2□□□□□ -2.44
CDK5RAP3Q96JB5 RNU6-242P-201ENST00000384359 107 ntBASIC-0.2□□□□□ -2.44
CDK5RAP3Q96JB5 RNA5SP147-201ENST00000516493 109 ntBASIC-0.2□□□□□ -2.44
CDK5RAP3Q96JB5 RNA5SP480-201ENST00000516840 109 ntBASIC-0.2□□□□□ -2.44
CDK5RAP3Q96JB5 RNA5SP330-201ENST00000517096 96 ntBASIC-0.2□□□□□ -2.44
CDK5RAP3Q96JB5 MIR3657-201ENST00000584818 117 ntBASIC-0.2□□□□□ -2.44
CDK5RAP3Q96JB5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
CDK5RAP3Q96JB5 SNORD114-12-201ENST00000365400 75 ntBASIC-0.21□□□□□ -2.44
CDK5RAP3Q96JB5 AC244250.2-201ENST00000418731 148 ntBASIC-0.21□□□□□ -2.44
CDK5RAP3Q96JB5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.21□□□□□ -2.44
CDK5RAP3Q96JB5 SNORA32.1-201ENST00000364514 115 ntBASIC-0.22□□□□□ -2.44
CDK5RAP3Q96JB5 SNORD49B-201ENST00000365172 72 ntBASIC-0.22□□□□□ -2.44
CDK5RAP3Q96JB5 RNU6-302P-201ENST00000365249 107 ntBASIC-0.22□□□□□ -2.44
CDK5RAP3Q96JB5 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.22□□□□□ -2.44
CDK5RAP3Q96JB5 RNU7-171P-201ENST00000459581 62 ntBASIC-0.22□□□□□ -2.44
CDK5RAP3Q96JB5 SNORA40.17-201ENST00000517256 115 ntBASIC-0.22□□□□□ -2.44
CDK5RAP3Q96JB5 SNORA2.1-201ENST00000363089 137 ntBASIC-0.23□□□□□ -2.45
CDK5RAP3Q96JB5 RNU6-820P-201ENST00000384273 107 ntBASIC-0.23□□□□□ -2.45
CDK5RAP3Q96JB5 RNU6-455P-201ENST00000384681 107 ntBASIC-0.23□□□□□ -2.45
CDK5RAP3Q96JB5 AC145423.2-201ENST00000610631 239 ntBASIC-0.23□□□□□ -2.45
CDK5RAP3Q96JB5 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.24□□□□□ -2.45
CDK5RAP3Q96JB5 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.24□□□□□ -2.45
CDK5RAP3Q96JB5 SNORA18.1-201ENST00000363418 128 ntBASIC-0.24□□□□□ -2.45
CDK5RAP3Q96JB5 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.24□□□□□ -2.45
CDK5RAP3Q96JB5 MIR7-2-201ENST00000384970 110 ntBASIC-0.24□□□□□ -2.45
CDK5RAP3Q96JB5 RNU6-303P-201ENST00000517091 106 ntBASIC-0.24□□□□□ -2.45
CDK5RAP3Q96JB5 AC062037.1-201ENST00000605302 128 ntBASIC-0.24□□□□□ -2.45
CDK5RAP3Q96JB5 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.24□□□□□ -2.45
CDK5RAP3Q96JB5 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.25□□□□□ -2.45
CDK5RAP3Q96JB5 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.26□□□□□ -2.45
CDK5RAP3Q96JB5 RNU6-380P-201ENST00000410207 107 ntBASIC-0.26□□□□□ -2.45
CDK5RAP3Q96JB5 SNORD73B-201ENST00000364394 72 ntBASIC-0.27□□□□□ -2.45
CDK5RAP3Q96JB5 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.27□□□□□ -2.45
CDK5RAP3Q96JB5 SNORD4A-201ENST00000459174 72 ntBASIC-0.27□□□□□ -2.45
CDK5RAP3Q96JB5 U6.96-201ENST00000636425 70 ntBASIC-0.27□□□□□ -2.45
CDK5RAP3Q96JB5 MIR655-201ENST00000362159 97 ntBASIC-0.28□□□□□ -2.45
CDK5RAP3Q96JB5 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.28□□□□□ -2.45
CDK5RAP3Q96JB5 RNU6-502P-201ENST00000362419 108 ntBASIC-0.29□□□□□ -2.46
CDK5RAP3Q96JB5 MIR9-2-201ENST00000384838 87 ntBASIC-0.29□□□□□ -2.46
CDK5RAP3Q96JB5 MIR6773-201ENST00000612812 74 ntBASIC-0.29□□□□□ -2.46
CDK5RAP3Q96JB5 RNU6-315P-201ENST00000362666 107 ntBASIC-0.3□□□□□ -2.46
CDK5RAP3Q96JB5 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.3□□□□□ -2.46
CDK5RAP3Q96JB5 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.3□□□□□ -2.46
CDK5RAP3Q96JB5 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.3□□□□□ -2.46
CDK5RAP3Q96JB5 RNU6-900P-201ENST00000384498 102 ntBASIC-0.3□□□□□ -2.46
CDK5RAP3Q96JB5 MIR2909-201ENST00000617113 69 ntBASIC-0.3□□□□□ -2.46
CDK5RAP3Q96JB5 MIR4484-201ENST00000582855 83 ntBASIC-0.31□□□□□ -2.46
CDK5RAP3Q96JB5 RNU6-330P-201ENST00000363015 107 ntBASIC-0.32□□□□□ -2.46
CDK5RAP3Q96JB5 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.32□□□□□ -2.46
CDK5RAP3Q96JB5 AC074348.1-201ENST00000426503 132 ntBASIC-0.32□□□□□ -2.46
CDK5RAP3Q96JB5 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.32□□□□□ -2.46
CDK5RAP3Q96JB5 RNU6-807P-201ENST00000516805 107 ntBASIC-0.32□□□□□ -2.46
CDK5RAP3Q96JB5 MIR4263-201ENST00000584745 83 ntBASIC-0.32□□□□□ -2.46
CDK5RAP3Q96JB5 SNORA8.1-201ENST00000384250 140 ntBASIC-0.33□□□□□ -2.46
CDK5RAP3Q96JB5 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.33□□□□□ -2.46
CDK5RAP3Q96JB5 MIR3675-201ENST00000583661 73 ntBASIC-0.33□□□□□ -2.46
CDK5RAP3Q96JB5 MIR3666-201ENST00000607845 111 ntBASIC-0.33□□□□□ -2.46
CDK5RAP3Q96JB5 MIR1297-201ENST00000637311 77 ntBASIC-0.33□□□□□ -2.46
CDK5RAP3Q96JB5 SNORA33.1-201ENST00000364957 130 ntBASIC-0.34□□□□□ -2.46
CDK5RAP3Q96JB5 RNU6-337P-201ENST00000391243 106 ntBASIC-0.34□□□□□ -2.46
CDK5RAP3Q96JB5 MIR4666B-201ENST00000578142 81 ntBASIC-0.34□□□□□ -2.46
CDK5RAP3Q96JB5 MIR1245B-201ENST00000636115 69 ntBASIC-0.34□□□□□ -2.46
CDK5RAP3Q96JB5 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.35□□□□□ -2.47
CDK5RAP3Q96JB5 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.35□□□□□ -2.47
CDK5RAP3Q96JB5 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.35□□□□□ -2.47
CDK5RAP3Q96JB5 RNU6-901P-201ENST00000384593 106 ntBASIC-0.35□□□□□ -2.47
CDK5RAP3Q96JB5 SNORA26.2-201ENST00000390922 122 ntBASIC-0.35□□□□□ -2.47
CDK5RAP3Q96JB5 RNU7-55P-201ENST00000459426 62 ntBASIC-0.35□□□□□ -2.47
CDK5RAP3Q96JB5 MIR6779-201ENST00000617283 64 ntBASIC-0.35□□□□□ -2.47
CDK5RAP3Q96JB5 uc_338.36-201ENST00000622331 158 ntBASIC-0.35□□□□□ -2.47
CDK5RAP3Q96JB5 MIRLET7B-201ENST00000385140 83 ntBASIC-0.36□□□□□ -2.47
CDK5RAP3Q96JB5 MIR4712-201ENST00000583750 82 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms