Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.09□□□□□ -2.58
TTC28Q96AY4 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.09□□□□□ -2.58
TTC28Q96AY4 SNORA63.7-201ENST00000365579 123 ntBASIC-1.09□□□□□ -2.58
TTC28Q96AY4 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.09□□□□□ -2.58
TTC28Q96AY4 MIR548N-201ENST00000408742 75 ntBASIC-1.09□□□□□ -2.58
TTC28Q96AY4 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.09□□□□□ -2.58
TTC28Q96AY4 AC025166.1-201ENST00000612411 163 ntBASIC-1.09□□□□□ -2.58
TTC28Q96AY4 SNORD38.1-201ENST00000363863 68 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 RNU6-246P-201ENST00000384702 107 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.1□□□□□ -2.59
TTC28Q96AY4 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 RPS29P30-201ENST00000600975 111 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 AL442128.1-201ENST00000615151 90 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 AC104985.2-201ENST00000620598 500 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 SNORD116-1-201ENST00000384335 95 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 RNU6-68P-201ENST00000516576 104 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 RNU6-861P-201ENST00000516745 106 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 MIR3613-201ENST00000579844 87 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 MIR3064-201ENST00000581130 66 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 U4.4-201ENST00000620626 117 ntBASIC-1.1□□□□□ -2.59
TTC28Q96AY4 SNORD18C-201ENST00000362704 69 ntBASIC-1.11□□□□□ -2.59
TTC28Q96AY4 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.11□□□□□ -2.59
TTC28Q96AY4 MIR559-201ENST00000385188 96 ntBASIC-1.11□□□□□ -2.59
TTC28Q96AY4 AL021921.1-201ENST00000442774 93 ntBASIC-1.11□□□□□ -2.59
TTC28Q96AY4 RNY4P20-201ENST00000516678 93 ntBASIC-1.11□□□□□ -2.59
TTC28Q96AY4 AC025253.1-201ENST00000613623 543 ntBASIC-1.11□□□□□ -2.59
TTC28Q96AY4 U2.18-201ENST00000622185 84 ntBASIC-1.11□□□□□ -2.59
TTC28Q96AY4 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.11□□□□□ -2.59
TTC28Q96AY4 SNORD81.2-201ENST00000365153 76 ntBASIC-1.11□□□□□ -2.59
TTC28Q96AY4 RNU6-422P-201ENST00000384632 107 ntBASIC-1.11□□□□□ -2.59
TTC28Q96AY4 SNORD116.3-201ENST00000517176 78 ntBASIC-1.11□□□□□ -2.59
TTC28Q96AY4 AC078883.4-201ENST00000623218 367 ntBASIC-1.11□□□□□ -2.59
TTC28Q96AY4 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 SNORD50.2-201ENST00000365465 70 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 RNU7-85P-201ENST00000458851 63 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 RNU6-506P-201ENST00000516553 94 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 AC090574.1-201ENST00000623186 233 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 MIR3974-201ENST00000637126 96 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 SNORA25.1-201ENST00000362326 128 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 RNU6-290P-201ENST00000365212 101 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 RNU6-974P-201ENST00000384099 108 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 MIR656-201ENST00000385224 78 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 MIR548A3-201ENST00000385297 97 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 RNU6-121P-201ENST00000410525 99 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 SNORD2.1-201ENST00000458762 69 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 FGF7P7-201ENST00000514120 227 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 MIR4744-201ENST00000581563 82 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 AC006254.2-201ENST00000603259 279 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 AL137067.1-201ENST00000615933 120 ntBASIC-1.12□□□□□ -2.59
TTC28Q96AY4 RNU4-14P-201ENST00000410858 122 ntBASIC-1.13□□□□□ -2.59
TTC28Q96AY4 AC073869.6-201ENST00000640656 341 ntBASIC-1.13□□□□□ -2.59
TTC28Q96AY4 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.13□□□□□ -2.59
TTC28Q96AY4 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.13□□□□□ -2.59
TTC28Q96AY4 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.13□□□□□ -2.59
TTC28Q96AY4 MTATP6P21-201ENST00000440681 189 ntBASIC-1.13□□□□□ -2.59
TTC28Q96AY4 AC092794.1-201ENST00000612734 582 ntBASIC-1.13□□□□□ -2.59
TTC28Q96AY4 RNY1P1-201ENST00000364372 112 ntBASIC-1.14□□□□□ -2.59
TTC28Q96AY4 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.14□□□□□ -2.59
TTC28Q96AY4 AL691482.2-201ENST00000457453 84 ntBASIC-1.14□□□□□ -2.59
TTC28Q96AY4 RNU7-6P-201ENST00000516845 62 ntBASIC-1.14□□□□□ -2.59
TTC28Q96AY4 SNORA63-201ENST00000363450 132 ntBASIC-1.14□□□□□ -2.59
TTC28Q96AY4 MTND4LP32-201ENST00000636111 270 ntBASIC-1.14□□□□□ -2.59
TTC28Q96AY4 RNU6-478P-201ENST00000363904 110 ntBASIC-1.15□□□□□ -2.59
TTC28Q96AY4 AL118496.2-201ENST00000448300 230 ntBASIC-1.15□□□□□ -2.59
TTC28Q96AY4 RNU7-164P-201ENST00000459221 62 ntBASIC-1.15□□□□□ -2.59
TTC28Q96AY4 RNU6-240P-201ENST00000516098 97 ntBASIC-1.15□□□□□ -2.59
TTC28Q96AY4 RNU6-807P-201ENST00000516805 107 ntBASIC-1.15□□□□□ -2.59
TTC28Q96AY4 MIR3646-201ENST00000578301 84 ntBASIC-1.15□□□□□ -2.59
TTC28Q96AY4 AC080013.6-201ENST00000606185 215 ntBASIC-1.15□□□□□ -2.59
TTC28Q96AY4 MIR630-201ENST00000384957 97 ntBASIC-1.15□□□□□ -2.59
TTC28Q96AY4 RNU7-123P-201ENST00000515911 60 ntBASIC-1.15□□□□□ -2.59
TTC28Q96AY4 RNU6-656P-201ENST00000516785 107 ntBASIC-1.15□□□□□ -2.59
TTC28Q96AY4 AC002553.4-201ENST00000616896 331 ntBASIC-1.15□□□□□ -2.59
TTC28Q96AY4 RNU6-649P-201ENST00000384463 107 ntBASIC-1.16□□□□□ -2.59
TTC28Q96AY4 RNU6-310P-201ENST00000384655 107 ntBASIC-1.16□□□□□ -2.59
TTC28Q96AY4 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.16□□□□□ -2.59
TTC28Q96AY4 MTND3P2-201ENST00000438452 342 ntBASIC-1.16□□□□□ -2.59
TTC28Q96AY4 MTND1P29-201ENST00000448112 647 ntBASIC-1.16□□□□□ -2.59
TTC28Q96AY4 MIR548G-201ENST00000408442 89 ntBASIC-1.16□□□□□ -2.6
TTC28Q96AY4 RNU7-152P-201ENST00000458982 64 ntBASIC-1.16□□□□□ -2.6
TTC28Q96AY4 AC069439.1-201ENST00000494739 167 ntBASIC-1.16□□□□□ -2.6
TTC28Q96AY4 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.16□□□□□ -2.6
TTC28Q96AY4 RNU7-151P-201ENST00000516930 53 ntBASIC-1.16□□□□□ -2.6
TTC28Q96AY4 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.17□□□□□ -2.6
TTC28Q96AY4 AL121914.1-201ENST00000450188 156 ntBASIC-1.17□□□□□ -2.6
TTC28Q96AY4 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.17□□□□□ -2.6
TTC28Q96AY4 RNU6-277P-201ENST00000516272 106 ntBASIC-1.17□□□□□ -2.6
TTC28Q96AY4 RNY3P15-201ENST00000516297 97 ntBASIC-1.17□□□□□ -2.6
TTC28Q96AY4 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.17□□□□□ -2.6
TTC28Q96AY4 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.17□□□□□ -2.6
TTC28Q96AY4 MIR759-201ENST00000390224 91 ntBASIC-1.17□□□□□ -2.6
TTC28Q96AY4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.17□□□□□ -2.6
TTC28Q96AY4 SNORD4B-201ENST00000459083 72 ntBASIC-1.17□□□□□ -2.6
TTC28Q96AY4 RNU6-982P-201ENST00000516216 102 ntBASIC-1.17□□□□□ -2.6
TTC28Q96AY4 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.17□□□□□ -2.6
TTC28Q96AY4 MIR3121-201ENST00000579680 77 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms