Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.78□□□□□ -2.69
CCDC47Q96A33 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.78□□□□□ -2.69
CCDC47Q96A33 RNU6-576P-201ENST00000390854 102 ntBASIC-1.78□□□□□ -2.69
CCDC47Q96A33 RNU6-795P-201ENST00000516323 103 ntBASIC-1.78□□□□□ -2.69
CCDC47Q96A33 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.78□□□□□ -2.69
CCDC47Q96A33 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.79□□□□□ -2.7
CCDC47Q96A33 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.79□□□□□ -2.7
CCDC47Q96A33 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.79□□□□□ -2.7
CCDC47Q96A33 RNU6-772P-201ENST00000516042 105 ntBASIC-1.79□□□□□ -2.7
CCDC47Q96A33 MIR3144-201ENST00000579460 79 ntBASIC-1.79□□□□□ -2.7
CCDC47Q96A33 MIR6818-201ENST00000621576 65 ntBASIC-1.79□□□□□ -2.7
CCDC47Q96A33 MIR521-2-201ENST00000384818 87 ntBASIC-1.8□□□□□ -2.7
CCDC47Q96A33 MIR29B1-201ENST00000385015 81 ntBASIC-1.8□□□□□ -2.7
CCDC47Q96A33 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.8□□□□□ -2.7
CCDC47Q96A33 RNU7-134P-201ENST00000458997 64 ntBASIC-1.8□□□□□ -2.7
CCDC47Q96A33 RNU6-379P-201ENST00000363813 104 ntBASIC-1.81□□□□□ -2.7
CCDC47Q96A33 MIR519A2-201ENST00000384990 87 ntBASIC-1.81□□□□□ -2.7
CCDC47Q96A33 RNU7-154P-201ENST00000516194 62 ntBASIC-1.81□□□□□ -2.7
CCDC47Q96A33 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.81□□□□□ -2.7
CCDC47Q96A33 AC012531.4-201ENST00000616509 177 ntBASIC-1.81□□□□□ -2.7
CCDC47Q96A33 RNU6-694P-201ENST00000364071 147 ntBASIC-1.82□□□□□ -2.7
CCDC47Q96A33 SNORD115-22-201ENST00000364456 82 ntBASIC-1.82□□□□□ -2.7
CCDC47Q96A33 RNU6-463P-201ENST00000384340 107 ntBASIC-1.82□□□□□ -2.7
CCDC47Q96A33 MIR8485-201ENST00000401372 91 ntBASIC-1.82□□□□□ -2.7
CCDC47Q96A33 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.82□□□□□ -2.7
CCDC47Q96A33 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.82□□□□□ -2.7
CCDC47Q96A33 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.83□□□□□ -2.7
CCDC47Q96A33 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.83□□□□□ -2.7
CCDC47Q96A33 AL353691.2-201ENST00000443795 59 ntBASIC-1.83□□□□□ -2.7
CCDC47Q96A33 RNU6-518P-201ENST00000516056 96 ntBASIC-1.83□□□□□ -2.7
CCDC47Q96A33 RNU6-426P-201ENST00000516464 97 ntBASIC-1.83□□□□□ -2.7
CCDC47Q96A33 RNU6-388P-201ENST00000517012 105 ntBASIC-1.83□□□□□ -2.7
CCDC47Q96A33 RNU6-389P-201ENST00000517048 105 ntBASIC-1.83□□□□□ -2.7
CCDC47Q96A33 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.84□□□□□ -2.7
CCDC47Q96A33 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.84□□□□□ -2.7
CCDC47Q96A33 RNA5SP266-201ENST00000410273 108 ntBASIC-1.84□□□□□ -2.7
CCDC47Q96A33 SNORD57-201ENST00000448188 72 ntBASIC-1.84□□□□□ -2.7
CCDC47Q96A33 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.84□□□□□ -2.7
CCDC47Q96A33 U6.81-201ENST00000612550 106 ntBASIC-1.84□□□□□ -2.7
CCDC47Q96A33 SNORD58A-201ENST00000383875 65 ntBASIC-1.85□□□□□ -2.71
CCDC47Q96A33 MIR507-201ENST00000385234 94 ntBASIC-1.85□□□□□ -2.71
CCDC47Q96A33 MIR527-201ENST00000385244 85 ntBASIC-1.85□□□□□ -2.71
CCDC47Q96A33 RNU2-51P-201ENST00000410708 197 ntBASIC-1.85□□□□□ -2.71
CCDC47Q96A33 MTND4LP9-201ENST00000427694 174 ntBASIC-1.85□□□□□ -2.71
CCDC47Q96A33 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.86□□□□□ -2.71
CCDC47Q96A33 AC026421.1-201ENST00000519101 163 ntBASIC-1.86□□□□□ -2.71
CCDC47Q96A33 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.87□□□□□ -2.71
CCDC47Q96A33 RNU6-972P-201ENST00000391208 107 ntBASIC-1.87□□□□□ -2.71
CCDC47Q96A33 SNORA19.1-201ENST00000410656 129 ntBASIC-1.87□□□□□ -2.71
CCDC47Q96A33 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.87□□□□□ -2.71
CCDC47Q96A33 AC138207.3-201ENST00000585289 166 ntBASIC-1.87□□□□□ -2.71
CCDC47Q96A33 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.87□□□□□ -2.71
CCDC47Q96A33 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.87□□□□□ -2.71
CCDC47Q96A33 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.88□□□□□ -2.71
CCDC47Q96A33 HLA-S-202ENST00000425174 53 ntBASIC-1.88□□□□□ -2.71
CCDC47Q96A33 RNU7-107P-201ENST00000459121 61 ntBASIC-1.88□□□□□ -2.71
CCDC47Q96A33 MIR4796-201ENST00000580742 81 ntBASIC-1.88□□□□□ -2.71
CCDC47Q96A33 MIR6739-201ENST00000622461 75 ntBASIC-1.88□□□□□ -2.71
CCDC47Q96A33 RNA5SP26-201ENST00000362406 119 ntBASIC-1.89□□□□□ -2.71
CCDC47Q96A33 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.89□□□□□ -2.71
CCDC47Q96A33 MTND5P41-201ENST00000517498 206 ntBASIC-1.89□□□□□ -2.71
CCDC47Q96A33 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.9□□□□□ -2.71
CCDC47Q96A33 RNU6-80P-201ENST00000384195 107 ntBASIC-1.9□□□□□ -2.71
CCDC47Q96A33 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.9□□□□□ -2.71
CCDC47Q96A33 AL021921.1-201ENST00000442774 93 ntBASIC-1.9□□□□□ -2.71
CCDC47Q96A33 SNORA40-201ENST00000388090 126 ntBASIC-1.91□□□□□ -2.72
CCDC47Q96A33 RNU6-887P-201ENST00000410660 100 ntBASIC-1.91□□□□□ -2.72
CCDC47Q96A33 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.91□□□□□ -2.72
CCDC47Q96A33 MIR4320-201ENST00000636981 65 ntBASIC-1.91□□□□□ -2.72
CCDC47Q96A33 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.92□□□□□ -2.72
CCDC47Q96A33 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.92□□□□□ -2.72
CCDC47Q96A33 RNU7-88P-201ENST00000458752 63 ntBASIC-1.92□□□□□ -2.72
CCDC47Q96A33 RNU6-732P-201ENST00000516033 103 ntBASIC-1.92□□□□□ -2.72
CCDC47Q96A33 SCARNA23-201ENST00000516060 130 ntBASIC-1.92□□□□□ -2.72
CCDC47Q96A33 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.93□□□□□ -2.72
CCDC47Q96A33 MIR548A3-201ENST00000385297 97 ntBASIC-1.93□□□□□ -2.72
CCDC47Q96A33 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.93□□□□□ -2.72
CCDC47Q96A33 AL450471.1-201ENST00000447509 127 ntBASIC-1.93□□□□□ -2.72
CCDC47Q96A33 MIR4490-201ENST00000582647 84 ntBASIC-1.93□□□□□ -2.72
CCDC47Q96A33 MIR1236-201ENST00000408340 102 ntBASIC-1.94□□□□□ -2.72
CCDC47Q96A33 RNU6-752P-201ENST00000516376 102 ntBASIC-1.94□□□□□ -2.72
CCDC47Q96A33 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.95□□□□□ -2.72
CCDC47Q96A33 MIR889-201ENST00000401280 79 ntBASIC-1.95□□□□□ -2.72
CCDC47Q96A33 SNORD33.1-201ENST00000516213 88 ntBASIC-1.95□□□□□ -2.72
CCDC47Q96A33 U7.5-201ENST00000517224 61 ntBASIC-1.95□□□□□ -2.72
CCDC47Q96A33 MIR5683-201ENST00000636514 76 ntBASIC-1.95□□□□□ -2.72
CCDC47Q96A33 MIR3914-2-201ENST00000637339 95 ntBASIC-1.95□□□□□ -2.72
CCDC47Q96A33 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.96□□□□□ -2.72
CCDC47Q96A33 RNU6-164P-201ENST00000364604 103 ntBASIC-1.96□□□□□ -2.72
CCDC47Q96A33 RNA5SP331-201ENST00000364986 107 ntBASIC-1.96□□□□□ -2.72
CCDC47Q96A33 AL078595.1-201ENST00000404458 226 ntBASIC-1.96□□□□□ -2.72
CCDC47Q96A33 RNU6-257P-201ENST00000410238 98 ntBASIC-1.96□□□□□ -2.72
CCDC47Q96A33 MIR5591-201ENST00000578248 65 ntBASIC-1.96□□□□□ -2.72
CCDC47Q96A33 AC091912.2-201ENST00000624798 167 ntBASIC-1.96□□□□□ -2.72
CCDC47Q96A33 SNORD116-10-201ENST00000363791 102 ntBASIC-1.97□□□□□ -2.72
CCDC47Q96A33 SNORD19-201ENST00000391191 68 ntBASIC-1.97□□□□□ -2.72
CCDC47Q96A33 AP002795.1-201ENST00000534879 84 ntBASIC-1.97□□□□□ -2.72
CCDC47Q96A33 AL353621.2-201ENST00000605340 133 ntBASIC-1.97□□□□□ -2.72
CCDC47Q96A33 RNU6-182P-201ENST00000516970 105 ntBASIC-1.98□□□□□ -2.73
CCDC47Q96A33 MIR548AG1-201ENST00000579932 66 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms