Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MIR4752-201ENST00000579672 72 ntBASIC1.65□□□□□ -2.15
PTCD2Q8WV60 MIR502-201ENST00000606349 86 ntBASIC1.65□□□□□ -2.15
PTCD2Q8WV60 Y_RNA.118-201ENST00000363300 101 ntBASIC1.64□□□□□ -2.15
PTCD2Q8WV60 TRMT112P2-201ENST00000512910 132 ntBASIC1.64□□□□□ -2.15
PTCD2Q8WV60 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.64□□□□□ -2.15
PTCD2Q8WV60 HMGN2P22-201ENST00000427588 175 ntBASIC1.63□□□□□ -2.15
PTCD2Q8WV60 MIR618-201ENST00000385287 98 ntBASIC1.62□□□□□ -2.15
PTCD2Q8WV60 SNORD1B-201ENST00000363091 84 ntBASIC1.61□□□□□ -2.15
PTCD2Q8WV60 SNORD114-29-201ENST00000364819 70 ntBASIC1.61□□□□□ -2.15
PTCD2Q8WV60 Y_RNA.355-201ENST00000365462 98 ntBASIC1.61□□□□□ -2.15
PTCD2Q8WV60 RNU4-62P-201ENST00000410125 130 ntBASIC1.61□□□□□ -2.15
PTCD2Q8WV60 RNA5SP222-201ENST00000411039 105 ntBASIC1.61□□□□□ -2.15
PTCD2Q8WV60 snoU13.18-201ENST00000459483 104 ntBASIC1.61□□□□□ -2.15
PTCD2Q8WV60 RNU7-154P-201ENST00000516194 62 ntBASIC1.61□□□□□ -2.15
PTCD2Q8WV60 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
PTCD2Q8WV60 SNORD115-25-201ENST00000362619 82 ntBASIC1.6□□□□□ -2.15
PTCD2Q8WV60 MIR548F3-201ENST00000408509 87 ntBASIC1.6□□□□□ -2.15
PTCD2Q8WV60 RNA5SP470-201ENST00000516463 106 ntBASIC1.6□□□□□ -2.15
PTCD2Q8WV60 MIR5706-201ENST00000579841 80 ntBASIC1.6□□□□□ -2.15
PTCD2Q8WV60 Y_RNA.109-201ENST00000363215 102 ntBASIC1.59□□□□□ -2.15
PTCD2Q8WV60 MIR1323-201ENST00000408090 73 ntBASIC1.59□□□□□ -2.15
PTCD2Q8WV60 MIR8070-201ENST00000616510 88 ntBASIC1.59□□□□□ -2.15
PTCD2Q8WV60 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
PTCD2Q8WV60 BX248123.2-201ENST00000606318 124 ntBASIC1.57□□□□□ -2.16
PTCD2Q8WV60 MIR6773-201ENST00000612812 74 ntBASIC1.57□□□□□ -2.16
PTCD2Q8WV60 RNU6-838P-201ENST00000363399 108 ntBASIC1.56□□□□□ -2.16
PTCD2Q8WV60 RNU1-42P-201ENST00000364033 160 ntBASIC1.56□□□□□ -2.16
PTCD2Q8WV60 RNY1P8-201ENST00000383970 114 ntBASIC1.56□□□□□ -2.16
PTCD2Q8WV60 RNU6-337P-201ENST00000391243 106 ntBASIC1.56□□□□□ -2.16
PTCD2Q8WV60 AP1B1P2-201ENST00000416196 106 ntBASIC1.56□□□□□ -2.16
PTCD2Q8WV60 RNA5SP404-201ENST00000517118 132 ntBASIC1.56□□□□□ -2.16
PTCD2Q8WV60 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.55□□□□□ -2.16
PTCD2Q8WV60 MIR4490-201ENST00000582647 84 ntBASIC1.55□□□□□ -2.16
PTCD2Q8WV60 U7.6-201ENST00000610841 64 ntBASIC1.55□□□□□ -2.16
PTCD2Q8WV60 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PTCD2Q8WV60 SNORD26-201ENST00000384147 75 ntBASIC1.54□□□□□ -2.16
PTCD2Q8WV60 RNU6-458P-201ENST00000384179 107 ntBASIC1.54□□□□□ -2.16
PTCD2Q8WV60 MIR548AG1-201ENST00000579932 66 ntBASIC1.54□□□□□ -2.16
PTCD2Q8WV60 U6.58-201ENST00000613107 107 ntBASIC1.54□□□□□ -2.16
PTCD2Q8WV60 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
PTCD2Q8WV60 RNU1-124P-201ENST00000363861 145 ntBASIC1.53□□□□□ -2.16
PTCD2Q8WV60 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
PTCD2Q8WV60 RNU6-419P-201ENST00000517030 63 ntBASIC1.53□□□□□ -2.16
PTCD2Q8WV60 MIR545-201ENST00000385085 106 ntBASIC1.52□□□□□ -2.17
PTCD2Q8WV60 AC069271.1-201ENST00000445577 156 ntBASIC1.52□□□□□ -2.17
PTCD2Q8WV60 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
PTCD2Q8WV60 RNU7-188P-201ENST00000517063 64 ntBASIC1.51□□□□□ -2.17
PTCD2Q8WV60 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
PTCD2Q8WV60 MIR26B-201ENST00000362251 77 ntBASIC1.5□□□□□ -2.17
PTCD2Q8WV60 RNU6-247P-201ENST00000362636 107 ntBASIC1.5□□□□□ -2.17
PTCD2Q8WV60 SNORA36.2-201ENST00000384004 127 ntBASIC1.5□□□□□ -2.17
PTCD2Q8WV60 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
PTCD2Q8WV60 RNU7-95P-201ENST00000459222 64 ntBASIC1.5□□□□□ -2.17
PTCD2Q8WV60 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
PTCD2Q8WV60 RNU6-229P-201ENST00000516614 102 ntBASIC1.49□□□□□ -2.17
PTCD2Q8WV60 MIR6504-201ENST00000613520 61 ntBASIC1.49□□□□□ -2.17
PTCD2Q8WV60 SNORA2A-201ENST00000383885 135 ntBASIC1.48□□□□□ -2.17
PTCD2Q8WV60 MIRLET7B-201ENST00000385140 83 ntBASIC1.48□□□□□ -2.17
PTCD2Q8WV60 MIR579-201ENST00000385221 98 ntBASIC1.48□□□□□ -2.17
PTCD2Q8WV60 SNORA67.6-201ENST00000391093 99 ntBASIC1.48□□□□□ -2.17
PTCD2Q8WV60 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
PTCD2Q8WV60 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
PTCD2Q8WV60 RNU1-29P-201ENST00000606574 126 ntBASIC1.48□□□□□ -2.17
PTCD2Q8WV60 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.48□□□□□ -2.17
PTCD2Q8WV60 RNA5SP517-201ENST00000364724 117 ntBASIC1.47□□□□□ -2.17
PTCD2Q8WV60 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
PTCD2Q8WV60 RNU6-782P-201ENST00000516852 104 ntBASIC1.47□□□□□ -2.17
PTCD2Q8WV60 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
PTCD2Q8WV60 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.47□□□□□ -2.17
PTCD2Q8WV60 Y_RNA.224-201ENST00000364308 111 ntBASIC1.46□□□□□ -2.18
PTCD2Q8WV60 RNU6-392P-201ENST00000364926 101 ntBASIC1.46□□□□□ -2.18
PTCD2Q8WV60 RNU6-42P-201ENST00000384165 107 ntBASIC1.46□□□□□ -2.18
PTCD2Q8WV60 Y_RNA.327-201ENST00000365201 102 ntBASIC1.45□□□□□ -2.18
PTCD2Q8WV60 SNORA49-201ENST00000386157 136 ntBASIC1.45□□□□□ -2.18
PTCD2Q8WV60 RNU7-160P-201ENST00000516660 62 ntBASIC1.45□□□□□ -2.18
PTCD2Q8WV60 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.45□□□□□ -2.18
PTCD2Q8WV60 MIR489-201ENST00000384923 84 ntBASIC1.44□□□□□ -2.18
PTCD2Q8WV60 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
PTCD2Q8WV60 RNA5SP220-201ENST00000516298 104 ntBASIC1.44□□□□□ -2.18
PTCD2Q8WV60 AL353765.1-201ENST00000605514 183 ntBASIC1.44□□□□□ -2.18
PTCD2Q8WV60 SNORA25.18-201ENST00000607153 114 ntBASIC1.44□□□□□ -2.18
PTCD2Q8WV60 RNU6-1036P-201ENST00000383959 104 ntBASIC1.43□□□□□ -2.18
PTCD2Q8WV60 Y_RNA.423-201ENST00000384057 113 ntBASIC1.43□□□□□ -2.18
PTCD2Q8WV60 MIR150-201ENST00000385048 84 ntBASIC1.43□□□□□ -2.18
PTCD2Q8WV60 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
PTCD2Q8WV60 MIR1276-201ENST00000408707 83 ntBASIC1.42□□□□□ -2.18
PTCD2Q8WV60 AC084368.1-201ENST00000620935 65 ntBASIC1.42□□□□□ -2.18
PTCD2Q8WV60 RNU6-502P-201ENST00000362419 108 ntBASIC1.41□□□□□ -2.18
PTCD2Q8WV60 RNU6-1206P-201ENST00000516339 103 ntBASIC1.41□□□□□ -2.18
PTCD2Q8WV60 RNU6-175P-201ENST00000516896 107 ntBASIC1.41□□□□□ -2.18
PTCD2Q8WV60 RNU7-151P-201ENST00000516930 53 ntBASIC1.41□□□□□ -2.18
PTCD2Q8WV60 RNU6-598P-201ENST00000364017 105 ntBASIC1.4□□□□□ -2.19
PTCD2Q8WV60 MIR140-201ENST00000385282 100 ntBASIC1.4□□□□□ -2.19
PTCD2Q8WV60 RNU6-995P-201ENST00000391244 107 ntBASIC1.4□□□□□ -2.19
PTCD2Q8WV60 MIR4421-201ENST00000578133 69 ntBASIC1.4□□□□□ -2.19
PTCD2Q8WV60 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
PTCD2Q8WV60 U2.18-201ENST00000622185 84 ntBASIC1.39□□□□□ -2.19
PTCD2Q8WV60 SNORA40.8-201ENST00000411034 126 ntBASIC1.38□□□□□ -2.19
PTCD2Q8WV60 SNORD71-201ENST00000411292 86 ntBASIC1.38□□□□□ -2.19
PTCD2Q8WV60 ACA64.5-201ENST00000516207 127 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms