Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 MIR4464-201ENST00000580818 92 ntBASIC-1.38□□□□□ -2.63
CCDC89Q8N998 MIR3657-201ENST00000584818 117 ntBASIC-1.38□□□□□ -2.63
CCDC89Q8N998 SNORD116-14-201ENST00000383894 92 ntBASIC-1.39□□□□□ -2.63
CCDC89Q8N998 SNORD116-17-201ENST00000383929 92 ntBASIC-1.39□□□□□ -2.63
CCDC89Q8N998 SNORD116-15-201ENST00000384445 92 ntBASIC-1.39□□□□□ -2.63
CCDC89Q8N998 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.39□□□□□ -2.63
CCDC89Q8N998 SNORD116-19-201ENST00000384729 92 ntBASIC-1.39□□□□□ -2.63
CCDC89Q8N998 AL500527.2-201ENST00000454105 95 ntBASIC-1.39□□□□□ -2.63
CCDC89Q8N998 AL691482.2-201ENST00000457453 84 ntBASIC-1.39□□□□□ -2.63
CCDC89Q8N998 RNU7-61P-201ENST00000515897 61 ntBASIC-1.39□□□□□ -2.63
CCDC89Q8N998 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.39□□□□□ -2.63
CCDC89Q8N998 SNORD114-17-201ENST00000364699 75 ntBASIC-1.4□□□□□ -2.63
CCDC89Q8N998 RNU6-431P-201ENST00000383874 107 ntBASIC-1.4□□□□□ -2.63
CCDC89Q8N998 MIR590-201ENST00000385008 97 ntBASIC-1.4□□□□□ -2.63
CCDC89Q8N998 SNORD64-201ENST00000386683 67 ntBASIC-1.4□□□□□ -2.63
CCDC89Q8N998 MIR1255B2-201ENST00000408618 67 ntBASIC-1.4□□□□□ -2.63
CCDC89Q8N998 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.4□□□□□ -2.63
CCDC89Q8N998 MIR4796-201ENST00000580742 81 ntBASIC-1.4□□□□□ -2.63
CCDC89Q8N998 SNORD83B-201ENST00000386745 93 ntBASIC-1.41□□□□□ -2.64
CCDC89Q8N998 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.41□□□□□ -2.64
CCDC89Q8N998 RNA5SP25-201ENST00000410815 110 ntBASIC-1.41□□□□□ -2.64
CCDC89Q8N998 MIR6888-201ENST00000621977 67 ntBASIC-1.41□□□□□ -2.64
CCDC89Q8N998 SNORA2.1-201ENST00000363089 137 ntBASIC-1.42□□□□□ -2.64
CCDC89Q8N998 SNORD116-10-201ENST00000363791 102 ntBASIC-1.42□□□□□ -2.64
CCDC89Q8N998 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.42□□□□□ -2.64
CCDC89Q8N998 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.42□□□□□ -2.64
CCDC89Q8N998 RNU6-274P-201ENST00000459566 107 ntBASIC-1.42□□□□□ -2.64
CCDC89Q8N998 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.42□□□□□ -2.64
CCDC89Q8N998 RNU6-162P-201ENST00000516228 103 ntBASIC-1.42□□□□□ -2.64
CCDC89Q8N998 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.43□□□□□ -2.64
CCDC89Q8N998 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.43□□□□□ -2.64
CCDC89Q8N998 RNU6-537P-201ENST00000517277 103 ntBASIC-1.43□□□□□ -2.64
CCDC89Q8N998 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.44□□□□□ -2.64
CCDC89Q8N998 RNU6-794P-201ENST00000517261 64 ntBASIC-1.44□□□□□ -2.64
CCDC89Q8N998 CYP3A54P-201ENST00000566950 75 ntBASIC-1.44□□□□□ -2.64
CCDC89Q8N998 U6.81-201ENST00000612550 106 ntBASIC-1.44□□□□□ -2.64
CCDC89Q8N998 AL445584.3-201ENST00000617173 78 ntBASIC-1.44□□□□□ -2.64
CCDC89Q8N998 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.45□□□□□ -2.64
CCDC89Q8N998 RNU6-109P-201ENST00000516364 107 ntBASIC-1.45□□□□□ -2.64
CCDC89Q8N998 RNU7-153P-201ENST00000516455 62 ntBASIC-1.45□□□□□ -2.64
CCDC89Q8N998 RNU6-184P-201ENST00000516514 107 ntBASIC-1.45□□□□□ -2.64
CCDC89Q8N998 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.46□□□□□ -2.64
CCDC89Q8N998 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.46□□□□□ -2.64
CCDC89Q8N998 MIR147A-201ENST00000385079 72 ntBASIC-1.46□□□□□ -2.64
CCDC89Q8N998 MIR3133-201ENST00000583157 78 ntBASIC-1.46□□□□□ -2.64
CCDC89Q8N998 MIR1302-5-201ENST00000408164 150 ntBASIC-1.47□□□□□ -2.64
CCDC89Q8N998 RNU6-774P-201ENST00000363238 107 ntBASIC-1.48□□□□□ -2.65
CCDC89Q8N998 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.48□□□□□ -2.65
CCDC89Q8N998 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.48□□□□□ -2.65
CCDC89Q8N998 MIR1236-201ENST00000408340 102 ntBASIC-1.48□□□□□ -2.65
CCDC89Q8N998 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.49□□□□□ -2.65
CCDC89Q8N998 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.49□□□□□ -2.65
CCDC89Q8N998 RNA5SP470-201ENST00000516463 106 ntBASIC-1.49□□□□□ -2.65
CCDC89Q8N998 AC140658.3-201ENST00000567603 271 ntBASIC-1.49□□□□□ -2.65
CCDC89Q8N998 U7.3-201ENST00000616123 62 ntBASIC-1.49□□□□□ -2.65
CCDC89Q8N998 uc_338.19-201ENST00000616808 99 ntBASIC-1.49□□□□□ -2.65
CCDC89Q8N998 RNU6-554P-201ENST00000410466 106 ntBASIC-1.5□□□□□ -2.65
CCDC89Q8N998 MIR382-201ENST00000637119 76 ntBASIC-1.5□□□□□ -2.65
CCDC89Q8N998 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.51□□□□□ -2.65
CCDC89Q8N998 SCARNA17-201ENST00000516183 144 ntBASIC-1.51□□□□□ -2.65
CCDC89Q8N998 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.52□□□□□ -2.65
CCDC89Q8N998 SNORD114-15-201ENST00000364687 72 ntBASIC-1.52□□□□□ -2.65
CCDC89Q8N998 SNORA19-201ENST00000384737 128 ntBASIC-1.52□□□□□ -2.65
CCDC89Q8N998 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.52□□□□□ -2.65
CCDC89Q8N998 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.52□□□□□ -2.65
CCDC89Q8N998 RNU6-704P-201ENST00000364162 103 ntBASIC-1.53□□□□□ -2.65
CCDC89Q8N998 RNU6-106P-201ENST00000384405 107 ntBASIC-1.53□□□□□ -2.65
CCDC89Q8N998 MIR521-2-201ENST00000384818 87 ntBASIC-1.53□□□□□ -2.65
CCDC89Q8N998 AL450471.1-201ENST00000447509 127 ntBASIC-1.53□□□□□ -2.65
CCDC89Q8N998 MIR4499-201ENST00000584834 69 ntBASIC-1.53□□□□□ -2.65
CCDC89Q8N998 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.53□□□□□ -2.65
CCDC89Q8N998 SNORD115-27-201ENST00000364430 82 ntBASIC-1.54□□□□□ -2.66
CCDC89Q8N998 RNU6-209P-201ENST00000384118 107 ntBASIC-1.54□□□□□ -2.66
CCDC89Q8N998 MIR548AX-201ENST00000580117 73 ntBASIC-1.54□□□□□ -2.66
CCDC89Q8N998 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.55□□□□□ -2.66
CCDC89Q8N998 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.55□□□□□ -2.66
CCDC89Q8N998 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.56□□□□□ -2.66
CCDC89Q8N998 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.56□□□□□ -2.66
CCDC89Q8N998 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.57□□□□□ -2.66
CCDC89Q8N998 MIR519A2-201ENST00000384990 87 ntBASIC-1.57□□□□□ -2.66
CCDC89Q8N998 RNA5SP395-201ENST00000516567 118 ntBASIC-1.57□□□□□ -2.66
CCDC89Q8N998 snoU83B.1-201ENST00000517136 88 ntBASIC-1.57□□□□□ -2.66
CCDC89Q8N998 MIR6129-201ENST00000616087 109 ntBASIC-1.57□□□□□ -2.66
CCDC89Q8N998 MIR6086-201ENST00000638065 55 ntBASIC-1.57□□□□□ -2.66
CCDC89Q8N998 RNU6-924P-201ENST00000362926 108 ntBASIC-1.58□□□□□ -2.66
CCDC89Q8N998 RNU6-959P-201ENST00000384671 107 ntBASIC-1.58□□□□□ -2.66
CCDC89Q8N998 SCARNA18B-201ENST00000458806 135 ntBASIC-1.58□□□□□ -2.66
CCDC89Q8N998 MIR6739-201ENST00000622461 75 ntBASIC-1.58□□□□□ -2.66
CCDC89Q8N998 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.59□□□□□ -2.66
CCDC89Q8N998 RNU6-518P-201ENST00000516056 96 ntBASIC-1.59□□□□□ -2.66
CCDC89Q8N998 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
CCDC89Q8N998 AL365222.1-201ENST00000614661 98 ntBASIC-1.59□□□□□ -2.66
CCDC89Q8N998 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.59□□□□□ -2.66
CCDC89Q8N998 RNU6-340P-201ENST00000364005 107 ntBASIC-1.6□□□□□ -2.67
CCDC89Q8N998 AL078595.1-201ENST00000404458 226 ntBASIC-1.61□□□□□ -2.67
CCDC89Q8N998 RNU7-154P-201ENST00000516194 62 ntBASIC-1.61□□□□□ -2.67
CCDC89Q8N998 RNU6-752P-201ENST00000516376 102 ntBASIC-1.61□□□□□ -2.67
CCDC89Q8N998 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.62□□□□□ -2.67
CCDC89Q8N998 RNU6-30P-201ENST00000384561 107 ntBASIC-1.62□□□□□ -2.67
CCDC89Q8N998 MIR519C-201ENST00000385053 87 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 219.2 ms