Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 HMGN2P22-201ENST00000427588 175 ntBASIC0.96□□□□□ -2.26
DEPDC4Q8N2C3 AC098934.3-201ENST00000430450 190 ntBASIC0.96□□□□□ -2.26
DEPDC4Q8N2C3 RNA5SP147-201ENST00000516493 109 ntBASIC0.96□□□□□ -2.26
DEPDC4Q8N2C3 RNU6-645P-201ENST00000364649 106 ntBASIC0.94□□□□□ -2.26
DEPDC4Q8N2C3 MIR1265-201ENST00000408444 86 ntBASIC0.94□□□□□ -2.26
DEPDC4Q8N2C3 RN7SL793P-201ENST00000583259 296 ntBASIC0.94□□□□□ -2.26
DEPDC4Q8N2C3 RNU6-1162P-201ENST00000384443 104 ntBASIC0.93□□□□□ -2.26
DEPDC4Q8N2C3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
DEPDC4Q8N2C3 RNA5SP436-201ENST00000516020 115 ntBASIC0.92□□□□□ -2.26
DEPDC4Q8N2C3 MIR5000-201ENST00000577717 103 ntBASIC0.92□□□□□ -2.26
DEPDC4Q8N2C3 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
DEPDC4Q8N2C3 SNORA63.6-201ENST00000364921 119 ntBASIC0.91□□□□□ -2.26
DEPDC4Q8N2C3 SNORA15B-2-201ENST00000384058 135 ntBASIC0.91□□□□□ -2.26
DEPDC4Q8N2C3 SNORA15B-1-201ENST00000384334 135 ntBASIC0.91□□□□□ -2.26
DEPDC4Q8N2C3 RNU6-229P-201ENST00000516614 102 ntBASIC0.91□□□□□ -2.26
DEPDC4Q8N2C3 AC103706.3-201ENST00000636297 85 ntBASIC0.91□□□□□ -2.26
DEPDC4Q8N2C3 MIR521-2-201ENST00000384818 87 ntBASIC0.9□□□□□ -2.27
DEPDC4Q8N2C3 Y_RNA.633-201ENST00000459107 95 ntBASIC0.9□□□□□ -2.27
DEPDC4Q8N2C3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.9□□□□□ -2.27
DEPDC4Q8N2C3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
DEPDC4Q8N2C3 AC244090.1-201ENST00000441884 93 ntBASIC0.89□□□□□ -2.27
DEPDC4Q8N2C3 AC021146.9-201ENST00000512503 156 ntBASIC0.89□□□□□ -2.27
DEPDC4Q8N2C3 MIR20A-201ENST00000362279 71 ntBASIC0.88□□□□□ -2.27
DEPDC4Q8N2C3 RNU4-38P-201ENST00000364472 129 ntBASIC0.88□□□□□ -2.27
DEPDC4Q8N2C3 MIR216A-201ENST00000385063 110 ntBASIC0.88□□□□□ -2.27
DEPDC4Q8N2C3 MIR548E-201ENST00000408287 88 ntBASIC0.88□□□□□ -2.27
DEPDC4Q8N2C3 RNU4-54P-201ENST00000516428 129 ntBASIC0.88□□□□□ -2.27
DEPDC4Q8N2C3 RNU6-656P-201ENST00000516785 107 ntBASIC0.88□□□□□ -2.27
DEPDC4Q8N2C3 MIR4511-201ENST00000582784 87 ntBASIC0.88□□□□□ -2.27
DEPDC4Q8N2C3 MIR6857-201ENST00000613267 93 ntBASIC0.88□□□□□ -2.27
DEPDC4Q8N2C3 MIR373-201ENST00000362273 69 ntBASIC0.87□□□□□ -2.27
DEPDC4Q8N2C3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.87□□□□□ -2.27
DEPDC4Q8N2C3 MIR6755-201ENST00000619993 66 ntBASIC0.87□□□□□ -2.27
DEPDC4Q8N2C3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
DEPDC4Q8N2C3 SNORD2-201ENST00000459163 69 ntBASIC0.86□□□□□ -2.27
DEPDC4Q8N2C3 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
DEPDC4Q8N2C3 snoU13.13-201ENST00000458842 104 ntBASIC0.85□□□□□ -2.27
DEPDC4Q8N2C3 RNU6-542P-201ENST00000516405 103 ntBASIC0.85□□□□□ -2.27
DEPDC4Q8N2C3 CYP3A137P-201ENST00000562436 69 ntBASIC0.85□□□□□ -2.27
DEPDC4Q8N2C3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
DEPDC4Q8N2C3 RNA5SP215-201ENST00000363440 122 ntBASIC0.84□□□□□ -2.27
DEPDC4Q8N2C3 SNORD114-29-201ENST00000364819 70 ntBASIC0.84□□□□□ -2.27
DEPDC4Q8N2C3 Y_RNA.375-201ENST00000365625 101 ntBASIC0.84□□□□□ -2.27
DEPDC4Q8N2C3 MIR582-201ENST00000365731 98 ntBASIC0.84□□□□□ -2.27
DEPDC4Q8N2C3 RNU6-945P-201ENST00000383947 107 ntBASIC0.84□□□□□ -2.27
DEPDC4Q8N2C3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
DEPDC4Q8N2C3 RNU6-1089P-201ENST00000516473 104 ntBASIC0.83□□□□□ -2.28
DEPDC4Q8N2C3 MIR548AD-201ENST00000584780 82 ntBASIC0.83□□□□□ -2.28
DEPDC4Q8N2C3 AL109933.3-201ENST00000619095 188 ntBASIC0.83□□□□□ -2.28
DEPDC4Q8N2C3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.82□□□□□ -2.28
DEPDC4Q8N2C3 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
DEPDC4Q8N2C3 MIR501-201ENST00000390204 84 ntBASIC0.82□□□□□ -2.28
DEPDC4Q8N2C3 MIR4677-201ENST00000584153 80 ntBASIC0.82□□□□□ -2.28
DEPDC4Q8N2C3 SNORD44.1-201ENST00000363202 61 ntBASIC0.81□□□□□ -2.28
DEPDC4Q8N2C3 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
DEPDC4Q8N2C3 MIR760-201ENST00000390220 80 ntBASIC0.81□□□□□ -2.28
DEPDC4Q8N2C3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.81□□□□□ -2.28
DEPDC4Q8N2C3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.8□□□□□ -2.28
DEPDC4Q8N2C3 RNA5SP128-201ENST00000365305 116 ntBASIC0.8□□□□□ -2.28
DEPDC4Q8N2C3 MIR193B-201ENST00000384907 83 ntBASIC0.8□□□□□ -2.28
DEPDC4Q8N2C3 MIR516B1-201ENST00000385211 90 ntBASIC0.8□□□□□ -2.28
DEPDC4Q8N2C3 RNA5SP457-201ENST00000363657 124 ntBASIC0.79□□□□□ -2.28
DEPDC4Q8N2C3 RNU6-302P-201ENST00000365249 107 ntBASIC0.79□□□□□ -2.28
DEPDC4Q8N2C3 MIR548C-201ENST00000384815 97 ntBASIC0.79□□□□□ -2.28
DEPDC4Q8N2C3 AL157398.1-201ENST00000452981 186 ntBASIC0.79□□□□□ -2.28
DEPDC4Q8N2C3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.79□□□□□ -2.28
DEPDC4Q8N2C3 RNA5SP121-201ENST00000516537 101 ntBASIC0.79□□□□□ -2.28
DEPDC4Q8N2C3 MIR1273G-201ENST00000577677 100 ntBASIC0.79□□□□□ -2.28
DEPDC4Q8N2C3 MIR3973-201ENST00000579824 107 ntBASIC0.79□□□□□ -2.28
DEPDC4Q8N2C3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.77□□□□□ -2.29
DEPDC4Q8N2C3 Y_RNA.178-201ENST00000363832 102 ntBASIC0.77□□□□□ -2.29
DEPDC4Q8N2C3 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
DEPDC4Q8N2C3 SNORA33.1-201ENST00000364957 130 ntBASIC0.76□□□□□ -2.29
DEPDC4Q8N2C3 MIR9-2-201ENST00000384838 87 ntBASIC0.76□□□□□ -2.29
DEPDC4Q8N2C3 RNA5SP299-201ENST00000391203 116 ntBASIC0.76□□□□□ -2.29
DEPDC4Q8N2C3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
DEPDC4Q8N2C3 RNU7-188P-201ENST00000517063 64 ntBASIC0.75□□□□□ -2.29
DEPDC4Q8N2C3 AC084368.1-201ENST00000620935 65 ntBASIC0.75□□□□□ -2.29
DEPDC4Q8N2C3 U6.96-201ENST00000636425 70 ntBASIC0.75□□□□□ -2.29
DEPDC4Q8N2C3 AC110620.1-201ENST00000416042 228 ntBASIC0.74□□□□□ -2.29
DEPDC4Q8N2C3 MIR6513-201ENST00000621188 64 ntBASIC0.74□□□□□ -2.29
DEPDC4Q8N2C3 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
DEPDC4Q8N2C3 MIR876-201ENST00000401147 81 ntBASIC0.73□□□□□ -2.29
DEPDC4Q8N2C3 MIR4698-201ENST00000577795 80 ntBASIC0.73□□□□□ -2.29
DEPDC4Q8N2C3 MIR4714-201ENST00000580728 77 ntBASIC0.73□□□□□ -2.29
DEPDC4Q8N2C3 MIR548V-201ENST00000584165 80 ntBASIC0.73□□□□□ -2.29
DEPDC4Q8N2C3 RNU6-669P-201ENST00000365575 107 ntBASIC0.72□□□□□ -2.29
DEPDC4Q8N2C3 MIR517B-201ENST00000385102 67 ntBASIC0.72□□□□□ -2.29
DEPDC4Q8N2C3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.72□□□□□ -2.29
DEPDC4Q8N2C3 SCARNA21.1-201ENST00000515996 128 ntBASIC0.72□□□□□ -2.29
DEPDC4Q8N2C3 AC243829.6-201ENST00000612652 106 ntBASIC0.72□□□□□ -2.29
DEPDC4Q8N2C3 SNORA68.3-201ENST00000515906 83 ntBASIC0.71□□□□□ -2.3
DEPDC4Q8N2C3 AC010487.4-201ENST00000637027 61 ntBASIC0.71□□□□□ -2.3
DEPDC4Q8N2C3 MIR924-201ENST00000638017 53 ntBASIC0.71□□□□□ -2.3
DEPDC4Q8N2C3 MIRLET7D-201ENST00000362263 87 ntBASIC0.7□□□□□ -2.3
DEPDC4Q8N2C3 SNORA9.1-201ENST00000362412 131 ntBASIC0.7□□□□□ -2.3
DEPDC4Q8N2C3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.7□□□□□ -2.3
DEPDC4Q8N2C3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.7□□□□□ -2.3
DEPDC4Q8N2C3 SNORA25.5-201ENST00000363782 126 ntBASIC0.7□□□□□ -2.3
DEPDC4Q8N2C3 RNU6-175P-201ENST00000516896 107 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms