Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MIR587-201ENST00000384845 96 ntBASIC-1.39□□□□□ -2.63
CCDC50Q8IVM0 snoU83B.1-201ENST00000517136 88 ntBASIC-1.39□□□□□ -2.63
CCDC50Q8IVM0 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.4□□□□□ -2.63
CCDC50Q8IVM0 SNORD58A-201ENST00000383875 65 ntBASIC-1.4□□□□□ -2.63
CCDC50Q8IVM0 AC026421.1-201ENST00000519101 163 ntBASIC-1.4□□□□□ -2.63
CCDC50Q8IVM0 MIR4719-201ENST00000585233 84 ntBASIC-1.4□□□□□ -2.63
CCDC50Q8IVM0 MIR6509-201ENST00000614603 85 ntBASIC-1.4□□□□□ -2.63
CCDC50Q8IVM0 MIR6888-201ENST00000621977 67 ntBASIC-1.4□□□□□ -2.63
CCDC50Q8IVM0 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.41□□□□□ -2.64
CCDC50Q8IVM0 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.41□□□□□ -2.64
CCDC50Q8IVM0 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.41□□□□□ -2.64
CCDC50Q8IVM0 RNA5SP25-201ENST00000410815 110 ntBASIC-1.41□□□□□ -2.64
CCDC50Q8IVM0 RNU6-255P-201ENST00000516957 105 ntBASIC-1.41□□□□□ -2.64
CCDC50Q8IVM0 RNU6-80P-201ENST00000384195 107 ntBASIC-1.42□□□□□ -2.64
CCDC50Q8IVM0 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.42□□□□□ -2.64
CCDC50Q8IVM0 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.42□□□□□ -2.64
CCDC50Q8IVM0 AC138207.3-201ENST00000585289 166 ntBASIC-1.42□□□□□ -2.64
CCDC50Q8IVM0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.42□□□□□ -2.64
CCDC50Q8IVM0 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.43□□□□□ -2.64
CCDC50Q8IVM0 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.43□□□□□ -2.64
CCDC50Q8IVM0 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.43□□□□□ -2.64
CCDC50Q8IVM0 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.43□□□□□ -2.64
CCDC50Q8IVM0 MIR1255B2-201ENST00000408618 67 ntBASIC-1.43□□□□□ -2.64
CCDC50Q8IVM0 RNU6-659P-201ENST00000516454 104 ntBASIC-1.43□□□□□ -2.64
CCDC50Q8IVM0 MIR3657-201ENST00000584818 117 ntBASIC-1.43□□□□□ -2.64
CCDC50Q8IVM0 AL445584.3-201ENST00000617173 78 ntBASIC-1.43□□□□□ -2.64
CCDC50Q8IVM0 U6.95-201ENST00000636931 70 ntBASIC-1.43□□□□□ -2.64
CCDC50Q8IVM0 RNU5F-1-201ENST00000362507 117 ntBASIC-1.44□□□□□ -2.64
CCDC50Q8IVM0 SCARNA23-201ENST00000516060 130 ntBASIC-1.44□□□□□ -2.64
CCDC50Q8IVM0 AC132825.6-201ENST00000638861 357 ntBASIC-1.44□□□□□ -2.64
CCDC50Q8IVM0 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.45□□□□□ -2.64
CCDC50Q8IVM0 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.45□□□□□ -2.64
CCDC50Q8IVM0 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.45□□□□□ -2.64
CCDC50Q8IVM0 RNU6-972P-201ENST00000391208 107 ntBASIC-1.45□□□□□ -2.64
CCDC50Q8IVM0 RNU6-887P-201ENST00000410660 100 ntBASIC-1.45□□□□□ -2.64
CCDC50Q8IVM0 RNU6-479P-201ENST00000516348 105 ntBASIC-1.45□□□□□ -2.64
CCDC50Q8IVM0 SNORA2.1-201ENST00000363089 137 ntBASIC-1.46□□□□□ -2.64
CCDC50Q8IVM0 AL691482.2-201ENST00000457453 84 ntBASIC-1.46□□□□□ -2.64
CCDC50Q8IVM0 RNU6-904P-201ENST00000516206 101 ntBASIC-1.46□□□□□ -2.64
CCDC50Q8IVM0 CYP3A54P-201ENST00000566950 75 ntBASIC-1.46□□□□□ -2.64
CCDC50Q8IVM0 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.47□□□□□ -2.64
CCDC50Q8IVM0 SNORD114-15-201ENST00000364687 72 ntBASIC-1.47□□□□□ -2.64
CCDC50Q8IVM0 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.47□□□□□ -2.64
CCDC50Q8IVM0 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.47□□□□□ -2.64
CCDC50Q8IVM0 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.47□□□□□ -2.64
CCDC50Q8IVM0 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.47□□□□□ -2.64
CCDC50Q8IVM0 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.48□□□□□ -2.65
CCDC50Q8IVM0 RNU6-907P-201ENST00000390924 102 ntBASIC-1.48□□□□□ -2.65
CCDC50Q8IVM0 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.48□□□□□ -2.65
CCDC50Q8IVM0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.49□□□□□ -2.65
CCDC50Q8IVM0 RNU7-134P-201ENST00000458997 64 ntBASIC-1.49□□□□□ -2.65
CCDC50Q8IVM0 MIR4796-201ENST00000580742 81 ntBASIC-1.49□□□□□ -2.65
CCDC50Q8IVM0 RNY1P5-201ENST00000383890 115 ntBASIC-1.5□□□□□ -2.65
CCDC50Q8IVM0 HLA-S-202ENST00000425174 53 ntBASIC-1.5□□□□□ -2.65
CCDC50Q8IVM0 U6.81-201ENST00000612550 106 ntBASIC-1.5□□□□□ -2.65
CCDC50Q8IVM0 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.51□□□□□ -2.65
CCDC50Q8IVM0 SNORD116-21-201ENST00000384507 92 ntBASIC-1.51□□□□□ -2.65
CCDC50Q8IVM0 RNU6-880P-201ENST00000384526 107 ntBASIC-1.51□□□□□ -2.65
CCDC50Q8IVM0 MIR8485-201ENST00000401372 91 ntBASIC-1.51□□□□□ -2.65
CCDC50Q8IVM0 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.52□□□□□ -2.65
CCDC50Q8IVM0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.52□□□□□ -2.65
CCDC50Q8IVM0 RNU7-61P-201ENST00000515897 61 ntBASIC-1.52□□□□□ -2.65
CCDC50Q8IVM0 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.52□□□□□ -2.65
CCDC50Q8IVM0 RNU6-412P-201ENST00000516434 106 ntBASIC-1.53□□□□□ -2.65
CCDC50Q8IVM0 AC090425.1-201ENST00000610007 140 ntBASIC-1.53□□□□□ -2.65
CCDC50Q8IVM0 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.53□□□□□ -2.65
CCDC50Q8IVM0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.53□□□□□ -2.65
CCDC50Q8IVM0 SNORD116-10-201ENST00000363791 102 ntBASIC-1.54□□□□□ -2.66
CCDC50Q8IVM0 MIR590-201ENST00000385008 97 ntBASIC-1.54□□□□□ -2.66
CCDC50Q8IVM0 RNU7-153P-201ENST00000516455 62 ntBASIC-1.54□□□□□ -2.66
CCDC50Q8IVM0 MIR5591-201ENST00000578248 65 ntBASIC-1.54□□□□□ -2.66
CCDC50Q8IVM0 RNU6-162P-201ENST00000516228 103 ntBASIC-1.55□□□□□ -2.66
CCDC50Q8IVM0 RNU6-537P-201ENST00000517277 103 ntBASIC-1.55□□□□□ -2.66
CCDC50Q8IVM0 MIR6086-201ENST00000638065 55 ntBASIC-1.55□□□□□ -2.66
CCDC50Q8IVM0 MIR521-2-201ENST00000384818 87 ntBASIC-1.56□□□□□ -2.66
CCDC50Q8IVM0 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.56□□□□□ -2.66
CCDC50Q8IVM0 RNA5SP395-201ENST00000516567 118 ntBASIC-1.56□□□□□ -2.66
CCDC50Q8IVM0 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.57□□□□□ -2.66
CCDC50Q8IVM0 MIR29B1-201ENST00000385015 81 ntBASIC-1.57□□□□□ -2.66
CCDC50Q8IVM0 MIR1236-201ENST00000408340 102 ntBASIC-1.57□□□□□ -2.66
CCDC50Q8IVM0 MIR4770-201ENST00000579149 58 ntBASIC-1.57□□□□□ -2.66
CCDC50Q8IVM0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.57□□□□□ -2.66
CCDC50Q8IVM0 RNU6-924P-201ENST00000362926 108 ntBASIC-1.58□□□□□ -2.66
CCDC50Q8IVM0 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.58□□□□□ -2.66
CCDC50Q8IVM0 SNORD116-14-201ENST00000383894 92 ntBASIC-1.58□□□□□ -2.66
CCDC50Q8IVM0 SNORD116-17-201ENST00000383929 92 ntBASIC-1.58□□□□□ -2.66
CCDC50Q8IVM0 SNORD116-15-201ENST00000384445 92 ntBASIC-1.58□□□□□ -2.66
CCDC50Q8IVM0 SNORD116-19-201ENST00000384729 92 ntBASIC-1.58□□□□□ -2.66
CCDC50Q8IVM0 MIR527-201ENST00000385244 85 ntBASIC-1.58□□□□□ -2.66
CCDC50Q8IVM0 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.59□□□□□ -2.66
CCDC50Q8IVM0 MIR519A2-201ENST00000384990 87 ntBASIC-1.59□□□□□ -2.66
CCDC50Q8IVM0 MIR889-201ENST00000401280 79 ntBASIC-1.59□□□□□ -2.66
CCDC50Q8IVM0 RNU6-109P-201ENST00000516364 107 ntBASIC-1.59□□□□□ -2.66
CCDC50Q8IVM0 RNU6-184P-201ENST00000516514 107 ntBASIC-1.59□□□□□ -2.66
CCDC50Q8IVM0 RNU6-746P-201ENST00000384112 109 ntBASIC-1.6□□□□□ -2.67
CCDC50Q8IVM0 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.6□□□□□ -2.67
CCDC50Q8IVM0 SNORD63.1-201ENST00000516178 80 ntBASIC-1.6□□□□□ -2.67
CCDC50Q8IVM0 MIR6818-201ENST00000621576 65 ntBASIC-1.6□□□□□ -2.67
CCDC50Q8IVM0 MIR4320-201ENST00000636981 65 ntBASIC-1.6□□□□□ -2.67
CCDC50Q8IVM0 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms