Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 RNA5SP66-201ENST00000517178 101 ntBASIC-0.47□□□□□ -2.48
CCDC71Q8IV32 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.48□□□□□ -2.49
CCDC71Q8IV32 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.48□□□□□ -2.49
CCDC71Q8IV32 SNORD75.2-201ENST00000408784 58 ntBASIC-0.48□□□□□ -2.49
CCDC71Q8IV32 RNU7-55P-201ENST00000459426 62 ntBASIC-0.48□□□□□ -2.49
CCDC71Q8IV32 SNORA40.17-201ENST00000517256 115 ntBASIC-0.48□□□□□ -2.49
CCDC71Q8IV32 MIR4436A-201ENST00000585278 85 ntBASIC-0.48□□□□□ -2.49
CCDC71Q8IV32 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 RNU2-51P-201ENST00000410708 197 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 RNA5SP461-201ENST00000516451 104 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 RNU6-158P-201ENST00000517104 100 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 MIR3115-201ENST00000577915 68 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 U4.2-201ENST00000618561 85 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.5□□□□□ -2.49
CCDC71Q8IV32 SNORD90-201ENST00000391145 111 ntBASIC-0.5□□□□□ -2.49
CCDC71Q8IV32 AL603908.1-201ENST00000406098 201 ntBASIC-0.5□□□□□ -2.49
CCDC71Q8IV32 U7.3-201ENST00000616123 62 ntBASIC-0.5□□□□□ -2.49
CCDC71Q8IV32 SNX3P1X-201ENST00000414887 175 ntBASIC-0.51□□□□□ -2.49
CCDC71Q8IV32 RNU6-502P-201ENST00000362419 108 ntBASIC-0.52□□□□□ -2.49
CCDC71Q8IV32 SNORD114-11-201ENST00000363738 75 ntBASIC-0.52□□□□□ -2.49
CCDC71Q8IV32 MIR1236-201ENST00000408340 102 ntBASIC-0.52□□□□□ -2.49
CCDC71Q8IV32 MIR4432-201ENST00000581823 84 ntBASIC-0.52□□□□□ -2.49
CCDC71Q8IV32 AC006254.2-201ENST00000603259 279 ntBASIC-0.52□□□□□ -2.49
CCDC71Q8IV32 RNU5F-1-201ENST00000362507 117 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 SNORA63.6-201ENST00000364921 119 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 MIR601-201ENST00000385256 79 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 MTATP8P2-201ENST00000435212 202 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 AC097510.1-201ENST00000510945 133 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 RNU6-162P-201ENST00000516228 103 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 MIR2052-201ENST00000636055 55 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 RNU6-901P-201ENST00000384593 106 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 MIR196A1-201ENST00000388006 70 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 AL031737.1-201ENST00000450125 223 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 AC114755.3-201ENST00000481111 251 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 MIR4796-201ENST00000580742 81 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 AC093726.3-201ENST00000637588 150 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 RNU6-24P-201ENST00000384440 107 ntBASIC-0.55□□□□□ -2.5
CCDC71Q8IV32 SNORD56B-201ENST00000384713 71 ntBASIC-0.55□□□□□ -2.5
CCDC71Q8IV32 snoU13.13-201ENST00000458842 104 ntBASIC-0.55□□□□□ -2.5
CCDC71Q8IV32 MIR4280-201ENST00000582178 76 ntBASIC-0.55□□□□□ -2.5
CCDC71Q8IV32 SNORD114-14-201ENST00000362723 75 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 RNU6-973P-201ENST00000364690 107 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 RNU6-382P-201ENST00000365181 106 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 RNY4P18-201ENST00000391107 89 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 snoU13.17-201ENST00000458802 104 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 RNA5SP180-201ENST00000516181 101 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 RNU6-990P-201ENST00000364385 104 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 AL606753.1-201ENST00000427435 87 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 RNA5SP470-201ENST00000516463 106 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 RNU6-789P-201ENST00000517105 102 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 MIR6773-201ENST00000612812 74 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 RNU6-824P-201ENST00000363724 104 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 RNA5SP192-201ENST00000364404 120 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 MIR198-201ENST00000637333 62 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 RNU6-260P-201ENST00000384092 107 ntBASIC-0.59□□□□□ -2.5
CCDC71Q8IV32 AL445193.1-201ENST00000441183 141 ntBASIC-0.59□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.59□□□□□ -2.5
CCDC71Q8IV32 MIR4773-1-201ENST00000637203 78 ntBASIC-0.59□□□□□ -2.5
CCDC71Q8IV32 RNU6-755P-201ENST00000364400 103 ntBASIC-0.6□□□□□ -2.51
CCDC71Q8IV32 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.6□□□□□ -2.51
CCDC71Q8IV32 MIR378F-201ENST00000578143 78 ntBASIC-0.6□□□□□ -2.51
CCDC71Q8IV32 MIR6851-201ENST00000617060 67 ntBASIC-0.6□□□□□ -2.51
CCDC71Q8IV32 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.6□□□□□ -2.51
CCDC71Q8IV32 MIR450A1-201ENST00000362262 91 ntBASIC-0.61□□□□□ -2.51
CCDC71Q8IV32 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.61□□□□□ -2.51
CCDC71Q8IV32 RNU6-337P-201ENST00000391243 106 ntBASIC-0.61□□□□□ -2.51
CCDC71Q8IV32 AC021146.9-201ENST00000512503 156 ntBASIC-0.61□□□□□ -2.51
CCDC71Q8IV32 RNU7-153P-201ENST00000516455 62 ntBASIC-0.61□□□□□ -2.51
CCDC71Q8IV32 U6.81-201ENST00000612550 106 ntBASIC-0.61□□□□□ -2.51
CCDC71Q8IV32 MIR519C-201ENST00000385053 87 ntBASIC-0.62□□□□□ -2.51
CCDC71Q8IV32 MIR204-201ENST00000385200 110 ntBASIC-0.62□□□□□ -2.51
CCDC71Q8IV32 SNORD83B-201ENST00000386745 93 ntBASIC-0.62□□□□□ -2.51
CCDC71Q8IV32 SNORA40.13-201ENST00000516379 120 ntBASIC-0.62□□□□□ -2.51
CCDC71Q8IV32 AP001318.4-201ENST00000616637 121 ntBASIC-0.62□□□□□ -2.51
CCDC71Q8IV32 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.62□□□□□ -2.51
CCDC71Q8IV32 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.63□□□□□ -2.51
CCDC71Q8IV32 MIRLET7B-201ENST00000385140 83 ntBASIC-0.63□□□□□ -2.51
CCDC71Q8IV32 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.63□□□□□ -2.51
CCDC71Q8IV32 RNU6-592P-201ENST00000411333 103 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 276.7 ms