Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MIR150-201ENST00000385048 84 ntBASIC1.42□□□□□ -2.18
RNF135Q8IUD6 SCARNA17.3-201ENST00000516381 125 ntBASIC1.42□□□□□ -2.18
RNF135Q8IUD6 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
RNF135Q8IUD6 MIR18A-201ENST00000362310 71 ntBASIC1.41□□□□□ -2.18
RNF135Q8IUD6 Y_RNA.407-201ENST00000383986 113 ntBASIC1.4□□□□□ -2.19
RNF135Q8IUD6 RNU6-939P-201ENST00000384634 107 ntBASIC1.4□□□□□ -2.19
RNF135Q8IUD6 MIR652-201ENST00000385278 98 ntBASIC1.4□□□□□ -2.19
RNF135Q8IUD6 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.4□□□□□ -2.19
RNF135Q8IUD6 MIR6828-201ENST00000636181 60 ntBASIC1.4□□□□□ -2.19
RNF135Q8IUD6 RNA5SP436-201ENST00000516020 115 ntBASIC1.39□□□□□ -2.19
RNF135Q8IUD6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.39□□□□□ -2.19
RNF135Q8IUD6 MIR6767-201ENST00000637302 66 ntBASIC1.39□□□□□ -2.19
RNF135Q8IUD6 MIR582-201ENST00000365731 98 ntBASIC1.38□□□□□ -2.19
RNF135Q8IUD6 RNU6-520P-201ENST00000384717 104 ntBASIC1.38□□□□□ -2.19
RNF135Q8IUD6 MIR548AE1-201ENST00000583292 70 ntBASIC1.38□□□□□ -2.19
RNF135Q8IUD6 MIR3660-201ENST00000584845 100 ntBASIC1.38□□□□□ -2.19
RNF135Q8IUD6 MIR548E-201ENST00000408287 88 ntBASIC1.37□□□□□ -2.19
RNF135Q8IUD6 RNA5SP227-201ENST00000516184 113 ntBASIC1.37□□□□□ -2.19
RNF135Q8IUD6 MIR4473-201ENST00000583731 91 ntBASIC1.37□□□□□ -2.19
RNF135Q8IUD6 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
RNF135Q8IUD6 SNORA41B-201ENST00000384785 128 ntBASIC1.35□□□□□ -2.19
RNF135Q8IUD6 RNA5SP222-201ENST00000411039 105 ntBASIC1.35□□□□□ -2.19
RNF135Q8IUD6 AC006210.1-201ENST00000424882 111 ntBASIC1.35□□□□□ -2.19
RNF135Q8IUD6 MIR548AD-201ENST00000584780 82 ntBASIC1.35□□□□□ -2.19
RNF135Q8IUD6 Y_RNA.30-201ENST00000362572 97 ntBASIC1.34□□□□□ -2.19
RNF135Q8IUD6 Y_RNA.246-201ENST00000364495 108 ntBASIC1.34□□□□□ -2.19
RNF135Q8IUD6 SNORD110-201ENST00000408189 75 ntBASIC1.34□□□□□ -2.19
RNF135Q8IUD6 RNU4-88P-201ENST00000411220 86 ntBASIC1.34□□□□□ -2.19
RNF135Q8IUD6 SNORA36.1-201ENST00000363424 132 ntBASIC1.33□□□□□ -2.2
RNF135Q8IUD6 Y_RNA.325-201ENST00000365171 122 ntBASIC1.33□□□□□ -2.2
RNF135Q8IUD6 Y_RNA.379-201ENST00000365653 102 ntBASIC1.33□□□□□ -2.2
RNF135Q8IUD6 RN7SL793P-201ENST00000583259 296 ntBASIC1.33□□□□□ -2.2
RNF135Q8IUD6 AL353765.1-201ENST00000605514 183 ntBASIC1.33□□□□□ -2.2
RNF135Q8IUD6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.32□□□□□ -2.2
RNF135Q8IUD6 RNA5SP268-201ENST00000516828 124 ntBASIC1.32□□□□□ -2.2
RNF135Q8IUD6 RNA5SP94-201ENST00000516917 108 ntBASIC1.32□□□□□ -2.2
RNF135Q8IUD6 MIR4661-201ENST00000582720 75 ntBASIC1.32□□□□□ -2.2
RNF135Q8IUD6 SNORA9.1-201ENST00000362412 131 ntBASIC1.31□□□□□ -2.2
RNF135Q8IUD6 RNU6-1246P-201ENST00000391064 107 ntBASIC1.31□□□□□ -2.2
RNF135Q8IUD6 RNU7-119P-201ENST00000459279 63 ntBASIC1.31□□□□□ -2.2
RNF135Q8IUD6 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
RNF135Q8IUD6 SNORA36.2-201ENST00000384004 127 ntBASIC1.29□□□□□ -2.2
RNF135Q8IUD6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.29□□□□□ -2.2
RNF135Q8IUD6 CYP3A54P-201ENST00000566950 75 ntBASIC1.29□□□□□ -2.2
RNF135Q8IUD6 MIR7107-201ENST00000611489 80 ntBASIC1.29□□□□□ -2.2
RNF135Q8IUD6 U6.96-201ENST00000636425 70 ntBASIC1.29□□□□□ -2.2
RNF135Q8IUD6 Y_RNA.178-201ENST00000363832 102 ntBASIC1.28□□□□□ -2.2
RNF135Q8IUD6 RNU6-231P-201ENST00000517122 103 ntBASIC1.28□□□□□ -2.2
RNF135Q8IUD6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.28□□□□□ -2.2
RNF135Q8IUD6 MIR216A-201ENST00000385063 110 ntBASIC1.27□□□□□ -2.21
RNF135Q8IUD6 MIR516B1-201ENST00000385211 90 ntBASIC1.27□□□□□ -2.21
RNF135Q8IUD6 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
RNF135Q8IUD6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.27□□□□□ -2.21
RNF135Q8IUD6 MIR5000-201ENST00000577717 103 ntBASIC1.27□□□□□ -2.21
RNF135Q8IUD6 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
RNF135Q8IUD6 SNORA70.25-201ENST00000612741 95 ntBASIC1.27□□□□□ -2.21
RNF135Q8IUD6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
RNF135Q8IUD6 RNU6-753P-201ENST00000363926 107 ntBASIC1.26□□□□□ -2.21
RNF135Q8IUD6 AL021921.1-201ENST00000442774 93 ntBASIC1.26□□□□□ -2.21
RNF135Q8IUD6 RNU6-518P-201ENST00000516056 96 ntBASIC1.26□□□□□ -2.21
RNF135Q8IUD6 AC090617.8-201ENST00000623339 167 ntBASIC1.26□□□□□ -2.21
RNF135Q8IUD6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
RNF135Q8IUD6 MIR4752-201ENST00000579672 72 ntBASIC1.24□□□□□ -2.21
RNF135Q8IUD6 SNORD116-16-201ENST00000384533 92 ntBASIC1.23□□□□□ -2.21
RNF135Q8IUD6 RNU6-980P-201ENST00000516925 103 ntBASIC1.23□□□□□ -2.21
RNF135Q8IUD6 AC243829.6-201ENST00000612652 106 ntBASIC1.23□□□□□ -2.21
RNF135Q8IUD6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
RNF135Q8IUD6 Y_RNA.74-201ENST00000362911 99 ntBASIC1.22□□□□□ -2.21
RNF135Q8IUD6 SNORD116.2-201ENST00000391251 93 ntBASIC1.22□□□□□ -2.21
RNF135Q8IUD6 HMGN2P22-201ENST00000427588 175 ntBASIC1.22□□□□□ -2.21
RNF135Q8IUD6 OR2A41P-201ENST00000473586 105 ntBASIC1.22□□□□□ -2.21
RNF135Q8IUD6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
RNF135Q8IUD6 RNY1P8-201ENST00000383970 114 ntBASIC1.21□□□□□ -2.22
RNF135Q8IUD6 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.21□□□□□ -2.22
RNF135Q8IUD6 MIR1255B2-201ENST00000408618 67 ntBASIC1.21□□□□□ -2.22
RNF135Q8IUD6 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.21□□□□□ -2.22
RNF135Q8IUD6 AC243829.3-201ENST00000622177 108 ntBASIC1.21□□□□□ -2.22
RNF135Q8IUD6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
RNF135Q8IUD6 Y_RNA.282-201ENST00000364793 102 ntBASIC1.2□□□□□ -2.22
RNF135Q8IUD6 AC244090.1-201ENST00000441884 93 ntBASIC1.2□□□□□ -2.22
RNF135Q8IUD6 ACA64.5-201ENST00000516207 127 ntBASIC1.2□□□□□ -2.22
RNF135Q8IUD6 SNORA40.16-201ENST00000517238 121 ntBASIC1.2□□□□□ -2.22
RNF135Q8IUD6 MIR373-201ENST00000362273 69 ntBASIC1.19□□□□□ -2.22
RNF135Q8IUD6 MIR608-201ENST00000384820 100 ntBASIC1.19□□□□□ -2.22
RNF135Q8IUD6 MIR519A2-201ENST00000384990 87 ntBASIC1.19□□□□□ -2.22
RNF135Q8IUD6 MIR527-201ENST00000385244 85 ntBASIC1.19□□□□□ -2.22
RNF135Q8IUD6 MIR140-201ENST00000385282 100 ntBASIC1.19□□□□□ -2.22
RNF135Q8IUD6 AC211469.2-201ENST00000605461 205 ntBASIC1.19□□□□□ -2.22
RNF135Q8IUD6 RNU1-29P-201ENST00000606574 126 ntBASIC1.19□□□□□ -2.22
RNF135Q8IUD6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RNF135Q8IUD6 MIR20A-201ENST00000362279 71 ntBASIC1.18□□□□□ -2.22
RNF135Q8IUD6 MIR7110-201ENST00000612638 86 ntBASIC1.18□□□□□ -2.22
RNF135Q8IUD6 RNA5SP517-201ENST00000364724 117 ntBASIC1.17□□□□□ -2.22
RNF135Q8IUD6 MIR5706-201ENST00000579841 80 ntBASIC1.17□□□□□ -2.22
RNF135Q8IUD6 RNU4-33P-201ENST00000364316 85 ntBASIC1.15□□□□□ -2.23
RNF135Q8IUD6 RNU6-35P-201ENST00000384530 107 ntBASIC1.15□□□□□ -2.23
RNF135Q8IUD6 MIR193B-201ENST00000384907 83 ntBASIC1.15□□□□□ -2.23
RNF135Q8IUD6 CYP3A137P-201ENST00000562436 69 ntBASIC1.15□□□□□ -2.23
RNF135Q8IUD6 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
RNF135Q8IUD6 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 1229 ms