Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MIR26B-201ENST00000362251 77 ntBASIC1.27□□□□□ -2.21
LYSMD3Q7Z3D4 HMGN2P22-201ENST00000427588 175 ntBASIC1.27□□□□□ -2.21
LYSMD3Q7Z3D4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.27□□□□□ -2.21
LYSMD3Q7Z3D4 MIR7111-201ENST00000619751 72 ntBASIC1.27□□□□□ -2.21
LYSMD3Q7Z3D4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.26□□□□□ -2.21
LYSMD3Q7Z3D4 RNA5SP222-201ENST00000411039 105 ntBASIC1.26□□□□□ -2.21
LYSMD3Q7Z3D4 AL021921.1-201ENST00000442774 93 ntBASIC1.26□□□□□ -2.21
LYSMD3Q7Z3D4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.25□□□□□ -2.21
LYSMD3Q7Z3D4 RNU7-119P-201ENST00000459279 63 ntBASIC1.25□□□□□ -2.21
LYSMD3Q7Z3D4 RNU6-518P-201ENST00000516056 96 ntBASIC1.25□□□□□ -2.21
LYSMD3Q7Z3D4 RNA5SP102-201ENST00000516865 106 ntBASIC1.25□□□□□ -2.21
LYSMD3Q7Z3D4 RNU1-29P-201ENST00000606574 126 ntBASIC1.25□□□□□ -2.21
LYSMD3Q7Z3D4 AC243829.6-201ENST00000612652 106 ntBASIC1.25□□□□□ -2.21
LYSMD3Q7Z3D4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.24□□□□□ -2.21
LYSMD3Q7Z3D4 RNU6-231P-201ENST00000517122 103 ntBASIC1.24□□□□□ -2.21
LYSMD3Q7Z3D4 MIR4452-201ENST00000583004 71 ntBASIC1.24□□□□□ -2.21
LYSMD3Q7Z3D4 Y_RNA.74-201ENST00000362911 99 ntBASIC1.23□□□□□ -2.21
LYSMD3Q7Z3D4 MIR20A-201ENST00000362279 71 ntBASIC1.22□□□□□ -2.21
LYSMD3Q7Z3D4 Y_RNA.379-201ENST00000365653 102 ntBASIC1.22□□□□□ -2.21
LYSMD3Q7Z3D4 RNU4-88P-201ENST00000411220 86 ntBASIC1.22□□□□□ -2.21
LYSMD3Q7Z3D4 AC244090.1-201ENST00000441884 93 ntBASIC1.22□□□□□ -2.21
LYSMD3Q7Z3D4 snoU13.18-201ENST00000459483 104 ntBASIC1.22□□□□□ -2.21
LYSMD3Q7Z3D4 AC243829.3-201ENST00000622177 108 ntBASIC1.22□□□□□ -2.21
LYSMD3Q7Z3D4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
LYSMD3Q7Z3D4 MIR1255B2-201ENST00000408618 67 ntBASIC1.21□□□□□ -2.22
LYSMD3Q7Z3D4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.2□□□□□ -2.22
LYSMD3Q7Z3D4 RNY1P8-201ENST00000383970 114 ntBASIC1.2□□□□□ -2.22
LYSMD3Q7Z3D4 SNORD116-16-201ENST00000384533 92 ntBASIC1.2□□□□□ -2.22
LYSMD3Q7Z3D4 MIR519A2-201ENST00000384990 87 ntBASIC1.2□□□□□ -2.22
LYSMD3Q7Z3D4 AC069271.1-201ENST00000445577 156 ntBASIC1.2□□□□□ -2.22
LYSMD3Q7Z3D4 MIR5706-201ENST00000579841 80 ntBASIC1.2□□□□□ -2.22
LYSMD3Q7Z3D4 AL353765.1-201ENST00000605514 183 ntBASIC1.2□□□□□ -2.22
LYSMD3Q7Z3D4 RNA5SP517-201ENST00000364724 117 ntBASIC1.19□□□□□ -2.22
LYSMD3Q7Z3D4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.19□□□□□ -2.22
LYSMD3Q7Z3D4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
LYSMD3Q7Z3D4 Y_RNA.282-201ENST00000364793 102 ntBASIC1.18□□□□□ -2.22
LYSMD3Q7Z3D4 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
LYSMD3Q7Z3D4 RNU6-753P-201ENST00000363926 107 ntBASIC1.17□□□□□ -2.22
LYSMD3Q7Z3D4 RNU6-42P-201ENST00000384165 107 ntBASIC1.17□□□□□ -2.22
LYSMD3Q7Z3D4 MIR527-201ENST00000385244 85 ntBASIC1.17□□□□□ -2.22
LYSMD3Q7Z3D4 SNORD116.2-201ENST00000391251 93 ntBASIC1.17□□□□□ -2.22
LYSMD3Q7Z3D4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.17□□□□□ -2.22
LYSMD3Q7Z3D4 RNA5SP220-201ENST00000516298 104 ntBASIC1.17□□□□□ -2.22
LYSMD3Q7Z3D4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
LYSMD3Q7Z3D4 SNORD114-22-201ENST00000365423 72 ntBASIC1.16□□□□□ -2.22
LYSMD3Q7Z3D4 SNORA36.2-201ENST00000384004 127 ntBASIC1.16□□□□□ -2.22
LYSMD3Q7Z3D4 RNU6-337P-201ENST00000391243 106 ntBASIC1.16□□□□□ -2.22
LYSMD3Q7Z3D4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.16□□□□□ -2.22
LYSMD3Q7Z3D4 RNU6-980P-201ENST00000516925 103 ntBASIC1.15□□□□□ -2.23
LYSMD3Q7Z3D4 SNORA25.18-201ENST00000607153 114 ntBASIC1.15□□□□□ -2.23
LYSMD3Q7Z3D4 MIR489-201ENST00000384923 84 ntBASIC1.14□□□□□ -2.23
LYSMD3Q7Z3D4 ACA64.5-201ENST00000516207 127 ntBASIC1.14□□□□□ -2.23
LYSMD3Q7Z3D4 SNORA40.16-201ENST00000517238 121 ntBASIC1.14□□□□□ -2.23
LYSMD3Q7Z3D4 SNORD114-29-201ENST00000364819 70 ntBASIC1.13□□□□□ -2.23
LYSMD3Q7Z3D4 SNORA49-201ENST00000386157 136 ntBASIC1.13□□□□□ -2.23
LYSMD3Q7Z3D4 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
LYSMD3Q7Z3D4 SNORD2-201ENST00000459163 69 ntBASIC1.13□□□□□ -2.23
LYSMD3Q7Z3D4 MIR548AG1-201ENST00000579932 66 ntBASIC1.13□□□□□ -2.23
LYSMD3Q7Z3D4 MIR4295-201ENST00000585286 85 ntBASIC1.13□□□□□ -2.23
LYSMD3Q7Z3D4 MIR7110-201ENST00000612638 86 ntBASIC1.13□□□□□ -2.23
LYSMD3Q7Z3D4 MIR6773-201ENST00000612812 74 ntBASIC1.13□□□□□ -2.23
LYSMD3Q7Z3D4 MIR140-201ENST00000385282 100 ntBASIC1.12□□□□□ -2.23
LYSMD3Q7Z3D4 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
LYSMD3Q7Z3D4 RNU7-188P-201ENST00000517063 64 ntBASIC1.12□□□□□ -2.23
LYSMD3Q7Z3D4 MIR96-201ENST00000362288 78 ntBASIC1.11□□□□□ -2.23
LYSMD3Q7Z3D4 RNU1-93P-201ENST00000364704 169 ntBASIC1.11□□□□□ -2.23
LYSMD3Q7Z3D4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.11□□□□□ -2.23
LYSMD3Q7Z3D4 MIR6734-201ENST00000621166 68 ntBASIC1.11□□□□□ -2.23
LYSMD3Q7Z3D4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
LYSMD3Q7Z3D4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.11□□□□□ -2.23
LYSMD3Q7Z3D4 SNORD115-25-201ENST00000362619 82 ntBASIC1.1□□□□□ -2.23
LYSMD3Q7Z3D4 SNORD118-201ENST00000363593 134 ntBASIC1.1□□□□□ -2.23
LYSMD3Q7Z3D4 SNORA2A-201ENST00000383885 135 ntBASIC1.1□□□□□ -2.23
LYSMD3Q7Z3D4 RNU6-1232P-201ENST00000516299 86 ntBASIC1.1□□□□□ -2.23
LYSMD3Q7Z3D4 RNU6-229P-201ENST00000516614 102 ntBASIC1.1□□□□□ -2.23
LYSMD3Q7Z3D4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LYSMD3Q7Z3D4 RNU6-246P-201ENST00000384702 107 ntBASIC1.09□□□□□ -2.23
LYSMD3Q7Z3D4 RNU7-154P-201ENST00000516194 62 ntBASIC1.09□□□□□ -2.23
LYSMD3Q7Z3D4 RNU6-175P-201ENST00000516896 107 ntBASIC1.09□□□□□ -2.23
LYSMD3Q7Z3D4 U7.6-201ENST00000610841 64 ntBASIC1.09□□□□□ -2.23
LYSMD3Q7Z3D4 Y_RNA.423-201ENST00000384057 113 ntBASIC1.08□□□□□ -2.24
LYSMD3Q7Z3D4 SNORA40.8-201ENST00000411034 126 ntBASIC1.07□□□□□ -2.24
LYSMD3Q7Z3D4 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
LYSMD3Q7Z3D4 SNORD1B-201ENST00000363091 84 ntBASIC1.06□□□□□ -2.24
LYSMD3Q7Z3D4 Y_RNA.109-201ENST00000363215 102 ntBASIC1.06□□□□□ -2.24
LYSMD3Q7Z3D4 RNU4-33P-201ENST00000364316 85 ntBASIC1.06□□□□□ -2.24
LYSMD3Q7Z3D4 SNORA40B-201ENST00000385573 128 ntBASIC1.06□□□□□ -2.24
LYSMD3Q7Z3D4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
LYSMD3Q7Z3D4 RNA5SP470-201ENST00000516463 106 ntBASIC1.06□□□□□ -2.24
LYSMD3Q7Z3D4 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
LYSMD3Q7Z3D4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.05□□□□□ -2.24
LYSMD3Q7Z3D4 SNORD114-27-201ENST00000363766 70 ntBASIC1.05□□□□□ -2.24
LYSMD3Q7Z3D4 RNU6-810P-201ENST00000364001 107 ntBASIC1.05□□□□□ -2.24
LYSMD3Q7Z3D4 RNU6-35P-201ENST00000384530 107 ntBASIC1.05□□□□□ -2.24
LYSMD3Q7Z3D4 MIR520E-201ENST00000384867 87 ntBASIC1.05□□□□□ -2.24
LYSMD3Q7Z3D4 MIRLET7B-201ENST00000385140 83 ntBASIC1.05□□□□□ -2.24
LYSMD3Q7Z3D4 RNU6-172P-201ENST00000411000 93 ntBASIC1.05□□□□□ -2.24
LYSMD3Q7Z3D4 MIR4677-201ENST00000584153 80 ntBASIC1.05□□□□□ -2.24
LYSMD3Q7Z3D4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
LYSMD3Q7Z3D4 MIR501-201ENST00000390204 84 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 306.5 ms