Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 Y_RNA.407-201ENST00000383986 113 ntBASIC0.96□□□□□ -2.26
CNKSR3Q6P9H4 MIR4752-201ENST00000579672 72 ntBASIC0.96□□□□□ -2.26
CNKSR3Q6P9H4 MIR4473-201ENST00000583731 91 ntBASIC0.96□□□□□ -2.26
CNKSR3Q6P9H4 SNORA70.25-201ENST00000612741 95 ntBASIC0.96□□□□□ -2.26
CNKSR3Q6P9H4 RNY1P8-201ENST00000383970 114 ntBASIC0.95□□□□□ -2.26
CNKSR3Q6P9H4 RNU6-1162P-201ENST00000384443 104 ntBASIC0.95□□□□□ -2.26
CNKSR3Q6P9H4 MIR608-201ENST00000384820 100 ntBASIC0.95□□□□□ -2.26
CNKSR3Q6P9H4 SNORD110-201ENST00000408189 75 ntBASIC0.95□□□□□ -2.26
CNKSR3Q6P9H4 AC006210.1-201ENST00000424882 111 ntBASIC0.95□□□□□ -2.26
CNKSR3Q6P9H4 AC021146.9-201ENST00000512503 156 ntBASIC0.95□□□□□ -2.26
CNKSR3Q6P9H4 ACA64.5-201ENST00000516207 127 ntBASIC0.95□□□□□ -2.26
CNKSR3Q6P9H4 SCARNA17.3-201ENST00000516381 125 ntBASIC0.95□□□□□ -2.26
CNKSR3Q6P9H4 MIR4714-201ENST00000580728 77 ntBASIC0.95□□□□□ -2.26
CNKSR3Q6P9H4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.95□□□□□ -2.26
CNKSR3Q6P9H4 RNU6-1079P-201ENST00000362861 110 ntBASIC0.94□□□□□ -2.26
CNKSR3Q6P9H4 RNU6-829P-201ENST00000363700 112 ntBASIC0.94□□□□□ -2.26
CNKSR3Q6P9H4 RNA5SP222-201ENST00000411039 105 ntBASIC0.94□□□□□ -2.26
CNKSR3Q6P9H4 MIR466-201ENST00000580653 84 ntBASIC0.94□□□□□ -2.26
CNKSR3Q6P9H4 MIR548V-201ENST00000584165 80 ntBASIC0.94□□□□□ -2.26
CNKSR3Q6P9H4 AL353765.1-201ENST00000605514 183 ntBASIC0.94□□□□□ -2.26
CNKSR3Q6P9H4 RNU1-29P-201ENST00000606574 126 ntBASIC0.94□□□□□ -2.26
CNKSR3Q6P9H4 SNORA33.1-201ENST00000364957 130 ntBASIC0.93□□□□□ -2.26
CNKSR3Q6P9H4 RNU4-45P-201ENST00000365469 141 ntBASIC0.93□□□□□ -2.26
CNKSR3Q6P9H4 SNORA75.1-201ENST00000391130 148 ntBASIC0.93□□□□□ -2.26
CNKSR3Q6P9H4 MIR548E-201ENST00000408287 88 ntBASIC0.93□□□□□ -2.26
CNKSR3Q6P9H4 U2.7-201ENST00000619197 100 ntBASIC0.92□□□□□ -2.26
CNKSR3Q6P9H4 RNU6-940P-201ENST00000363433 104 ntBASIC0.91□□□□□ -2.26
CNKSR3Q6P9H4 SNORA63.6-201ENST00000364921 119 ntBASIC0.91□□□□□ -2.26
CNKSR3Q6P9H4 MIR630-201ENST00000384957 97 ntBASIC0.91□□□□□ -2.26
CNKSR3Q6P9H4 Y_RNA.125-201ENST00000363371 111 ntBASIC0.9□□□□□ -2.27
CNKSR3Q6P9H4 RNA5SP517-201ENST00000364724 117 ntBASIC0.9□□□□□ -2.27
CNKSR3Q6P9H4 SNORA15B-2-201ENST00000384058 135 ntBASIC0.9□□□□□ -2.27
CNKSR3Q6P9H4 SNORA15B-1-201ENST00000384334 135 ntBASIC0.9□□□□□ -2.27
CNKSR3Q6P9H4 MIR548C-201ENST00000384815 97 ntBASIC0.9□□□□□ -2.27
CNKSR3Q6P9H4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.9□□□□□ -2.27
CNKSR3Q6P9H4 HMGN2P22-201ENST00000427588 175 ntBASIC0.9□□□□□ -2.27
CNKSR3Q6P9H4 RNU7-174P-201ENST00000516248 59 ntBASIC0.9□□□□□ -2.27
CNKSR3Q6P9H4 RNU6-92P-201ENST00000605893 104 ntBASIC0.9□□□□□ -2.27
CNKSR3Q6P9H4 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
CNKSR3Q6P9H4 RNU6-446P-201ENST00000362827 106 ntBASIC0.89□□□□□ -2.27
CNKSR3Q6P9H4 AC069271.1-201ENST00000445577 156 ntBASIC0.89□□□□□ -2.27
CNKSR3Q6P9H4 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
CNKSR3Q6P9H4 PSMC1P5-201ENST00000512850 177 ntBASIC0.89□□□□□ -2.27
CNKSR3Q6P9H4 MIR6513-201ENST00000621188 64 ntBASIC0.89□□□□□ -2.27
CNKSR3Q6P9H4 Y_RNA.236-201ENST00000364427 111 ntBASIC0.88□□□□□ -2.27
CNKSR3Q6P9H4 RNU6-122P-201ENST00000516818 107 ntBASIC0.88□□□□□ -2.27
CNKSR3Q6P9H4 U4.4-201ENST00000620626 117 ntBASIC0.88□□□□□ -2.27
CNKSR3Q6P9H4 SNORD60.1-201ENST00000362451 73 ntBASIC0.87□□□□□ -2.27
CNKSR3Q6P9H4 RNU6-302P-201ENST00000365249 107 ntBASIC0.87□□□□□ -2.27
CNKSR3Q6P9H4 RNU6-614P-201ENST00000384369 107 ntBASIC0.87□□□□□ -2.27
CNKSR3Q6P9H4 U6.59-201ENST00000615686 107 ntBASIC0.87□□□□□ -2.27
CNKSR3Q6P9H4 SNORA36.2-201ENST00000384004 127 ntBASIC0.86□□□□□ -2.27
CNKSR3Q6P9H4 MIR517B-201ENST00000385102 67 ntBASIC0.86□□□□□ -2.27
CNKSR3Q6P9H4 SNORA25.18-201ENST00000607153 114 ntBASIC0.86□□□□□ -2.27
CNKSR3Q6P9H4 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
CNKSR3Q6P9H4 uc_338.10-201ENST00000621872 182 ntBASIC0.86□□□□□ -2.27
CNKSR3Q6P9H4 RNU6-698P-201ENST00000363523 107 ntBASIC0.85□□□□□ -2.27
CNKSR3Q6P9H4 RNU6-34P-201ENST00000364874 107 ntBASIC0.85□□□□□ -2.27
CNKSR3Q6P9H4 RNU6-110P-201ENST00000384508 104 ntBASIC0.85□□□□□ -2.27
CNKSR3Q6P9H4 AC090617.8-201ENST00000623339 167 ntBASIC0.85□□□□□ -2.27
CNKSR3Q6P9H4 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
CNKSR3Q6P9H4 MIR516B1-201ENST00000385211 90 ntBASIC0.84□□□□□ -2.27
CNKSR3Q6P9H4 MIR140-201ENST00000385282 100 ntBASIC0.84□□□□□ -2.27
CNKSR3Q6P9H4 MIR3938-201ENST00000582157 103 ntBASIC0.84□□□□□ -2.27
CNKSR3Q6P9H4 MIR508-201ENST00000384857 115 ntBASIC0.83□□□□□ -2.28
CNKSR3Q6P9H4 MIR193B-201ENST00000384907 83 ntBASIC0.83□□□□□ -2.28
CNKSR3Q6P9H4 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
CNKSR3Q6P9H4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.83□□□□□ -2.28
CNKSR3Q6P9H4 SNORD118-201ENST00000363593 134 ntBASIC0.82□□□□□ -2.28
CNKSR3Q6P9H4 MIR936-201ENST00000401264 98 ntBASIC0.82□□□□□ -2.28
CNKSR3Q6P9H4 RNU6-141P-201ENST00000410499 105 ntBASIC0.82□□□□□ -2.28
CNKSR3Q6P9H4 CYP3A54P-201ENST00000566950 75 ntBASIC0.82□□□□□ -2.28
CNKSR3Q6P9H4 MIR5706-201ENST00000579841 80 ntBASIC0.82□□□□□ -2.28
CNKSR3Q6P9H4 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
CNKSR3Q6P9H4 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
CNKSR3Q6P9H4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.82□□□□□ -2.28
CNKSR3Q6P9H4 SNORD113-4-201ENST00000364802 75 ntBASIC0.81□□□□□ -2.28
CNKSR3Q6P9H4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
CNKSR3Q6P9H4 MIR1273G-201ENST00000577677 100 ntBASIC0.81□□□□□ -2.28
CNKSR3Q6P9H4 AL590095.2-201ENST00000604136 117 ntBASIC0.81□□□□□ -2.28
CNKSR3Q6P9H4 RNU6-1246P-201ENST00000391064 107 ntBASIC0.8□□□□□ -2.28
CNKSR3Q6P9H4 SNORD113-2-201ENST00000391082 72 ntBASIC0.8□□□□□ -2.28
CNKSR3Q6P9H4 RNU4-54P-201ENST00000516428 129 ntBASIC0.8□□□□□ -2.28
CNKSR3Q6P9H4 U6.96-201ENST00000636425 70 ntBASIC0.8□□□□□ -2.28
CNKSR3Q6P9H4 Y_RNA.325-201ENST00000365171 122 ntBASIC0.79□□□□□ -2.28
CNKSR3Q6P9H4 AC244090.1-201ENST00000441884 93 ntBASIC0.79□□□□□ -2.28
CNKSR3Q6P9H4 AC243829.6-201ENST00000612652 106 ntBASIC0.79□□□□□ -2.28
CNKSR3Q6P9H4 MIR20A-201ENST00000362279 71 ntBASIC0.78□□□□□ -2.28
CNKSR3Q6P9H4 SNORD114-23-201ENST00000363536 72 ntBASIC0.78□□□□□ -2.28
CNKSR3Q6P9H4 Y_RNA.246-201ENST00000364495 108 ntBASIC0.78□□□□□ -2.28
CNKSR3Q6P9H4 SNORA41B-201ENST00000384785 128 ntBASIC0.78□□□□□ -2.28
CNKSR3Q6P9H4 SNORA49-201ENST00000386157 136 ntBASIC0.78□□□□□ -2.28
CNKSR3Q6P9H4 SNORA40.8-201ENST00000411034 126 ntBASIC0.78□□□□□ -2.28
CNKSR3Q6P9H4 MIR6755-201ENST00000619993 66 ntBASIC0.78□□□□□ -2.28
CNKSR3Q6P9H4 SNORA9.1-201ENST00000362412 131 ntBASIC0.77□□□□□ -2.29
CNKSR3Q6P9H4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.77□□□□□ -2.29
CNKSR3Q6P9H4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.77□□□□□ -2.29
CNKSR3Q6P9H4 AC010487.4-201ENST00000637027 61 ntBASIC0.77□□□□□ -2.29
CNKSR3Q6P9H4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CNKSR3Q6P9H4 SNORA2A-201ENST00000383885 135 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms