Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 Y_RNA.443-201ENST00000384135 111 ntBASIC0.64□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR501-201ENST00000390204 84 ntBASIC0.64□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR548J-201ENST00000408833 112 ntBASIC0.64□□□□□ -2.31
HLA-DQA1Q5Y7H0 RNA5SP247-201ENST00000411181 105 ntBASIC0.64□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR151B-201ENST00000584249 96 ntBASIC0.64□□□□□ -2.31
HLA-DQA1Q5Y7H0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.64□□□□□ -2.31
HLA-DQA1Q5Y7H0 SNORA63.6-201ENST00000364921 119 ntBASIC0.63□□□□□ -2.31
HLA-DQA1Q5Y7H0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
HLA-DQA1Q5Y7H0 Y_RNA.633-201ENST00000459107 95 ntBASIC0.63□□□□□ -2.31
HLA-DQA1Q5Y7H0 RNA5SP220-201ENST00000516298 104 ntBASIC0.63□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR4677-201ENST00000584153 80 ntBASIC0.63□□□□□ -2.31
HLA-DQA1Q5Y7H0 Y_RNA.250-201ENST00000364542 110 ntBASIC0.62□□□□□ -2.31
HLA-DQA1Q5Y7H0 RNU6-1162P-201ENST00000384443 104 ntBASIC0.62□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR521-2-201ENST00000384818 87 ntBASIC0.62□□□□□ -2.31
HLA-DQA1Q5Y7H0 SNORA68.3-201ENST00000515906 83 ntBASIC0.62□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR499B-201ENST00000636498 73 ntBASIC0.62□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR20A-201ENST00000362279 71 ntBASIC0.61□□□□□ -2.31
HLA-DQA1Q5Y7H0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
HLA-DQA1Q5Y7H0 RNU6-848P-201ENST00000515948 107 ntBASIC0.61□□□□□ -2.31
HLA-DQA1Q5Y7H0 RNU7-129P-201ENST00000516128 62 ntBASIC0.61□□□□□ -2.31
HLA-DQA1Q5Y7H0 RNU6-617P-201ENST00000516147 107 ntBASIC0.61□□□□□ -2.31
HLA-DQA1Q5Y7H0 RNU6-473P-201ENST00000516164 107 ntBASIC0.61□□□□□ -2.31
HLA-DQA1Q5Y7H0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.61□□□□□ -2.31
HLA-DQA1Q5Y7H0 RNU7-188P-201ENST00000517063 64 ntBASIC0.61□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR6734-201ENST00000621166 68 ntBASIC0.61□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR103A1-201ENST00000362165 78 ntBASIC0.6□□□□□ -2.31
HLA-DQA1Q5Y7H0 SNORA33.1-201ENST00000364957 130 ntBASIC0.6□□□□□ -2.31
HLA-DQA1Q5Y7H0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.6□□□□□ -2.31
HLA-DQA1Q5Y7H0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.6□□□□□ -2.31
HLA-DQA1Q5Y7H0 SNORA25.4-201ENST00000363666 124 ntBASIC0.59□□□□□ -2.31
HLA-DQA1Q5Y7H0 RNA5SP128-201ENST00000365305 116 ntBASIC0.59□□□□□ -2.31
HLA-DQA1Q5Y7H0 Y_RNA.340-201ENST00000365330 92 ntBASIC0.59□□□□□ -2.31
HLA-DQA1Q5Y7H0 AC244090.1-201ENST00000441884 93 ntBASIC0.59□□□□□ -2.31
HLA-DQA1Q5Y7H0 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
HLA-DQA1Q5Y7H0 RNU6-1223P-201ENST00000517124 104 ntBASIC0.59□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR5000-201ENST00000577717 103 ntBASIC0.59□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR548AD-201ENST00000584780 82 ntBASIC0.59□□□□□ -2.31
HLA-DQA1Q5Y7H0 SNORA15B-2-201ENST00000384058 135 ntBASIC0.58□□□□□ -2.32
HLA-DQA1Q5Y7H0 RNU6-42P-201ENST00000384165 107 ntBASIC0.58□□□□□ -2.32
HLA-DQA1Q5Y7H0 SNORA15B-1-201ENST00000384334 135 ntBASIC0.58□□□□□ -2.32
HLA-DQA1Q5Y7H0 MIR4714-201ENST00000580728 77 ntBASIC0.58□□□□□ -2.32
HLA-DQA1Q5Y7H0 AC084368.1-201ENST00000620935 65 ntBASIC0.58□□□□□ -2.32
HLA-DQA1Q5Y7H0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
HLA-DQA1Q5Y7H0 SNORD114-29-201ENST00000364819 70 ntBASIC0.57□□□□□ -2.32
HLA-DQA1Q5Y7H0 AC125388.1-201ENST00000459631 156 ntBASIC0.57□□□□□ -2.32
HLA-DQA1Q5Y7H0 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
HLA-DQA1Q5Y7H0 MIR3925-201ENST00000584674 77 ntBASIC0.57□□□□□ -2.32
HLA-DQA1Q5Y7H0 MIR1265-201ENST00000408444 86 ntBASIC0.56□□□□□ -2.32
HLA-DQA1Q5Y7H0 RNU6-863P-201ENST00000515989 104 ntBASIC0.56□□□□□ -2.32
HLA-DQA1Q5Y7H0 RNU6-175P-201ENST00000516896 107 ntBASIC0.56□□□□□ -2.32
HLA-DQA1Q5Y7H0 MIRLET7D-201ENST00000362263 87 ntBASIC0.55□□□□□ -2.32
HLA-DQA1Q5Y7H0 MIR548C-201ENST00000384815 97 ntBASIC0.55□□□□□ -2.32
HLA-DQA1Q5Y7H0 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
HLA-DQA1Q5Y7H0 RNU6-1089P-201ENST00000516473 104 ntBASIC0.55□□□□□ -2.32
HLA-DQA1Q5Y7H0 AC243829.6-201ENST00000612652 106 ntBASIC0.54□□□□□ -2.32
HLA-DQA1Q5Y7H0 U6.96-201ENST00000636425 70 ntBASIC0.54□□□□□ -2.32
HLA-DQA1Q5Y7H0 RN7SL660P-201ENST00000614852 299 ntBASIC0.53□□□□□ -2.32
HLA-DQA1Q5Y7H0 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
HLA-DQA1Q5Y7H0 Y_RNA.375-201ENST00000365625 101 ntBASIC0.52□□□□□ -2.33
HLA-DQA1Q5Y7H0 RNU6-471P-201ENST00000383944 106 ntBASIC0.52□□□□□ -2.33
HLA-DQA1Q5Y7H0 RNU6-815P-201ENST00000384080 113 ntBASIC0.52□□□□□ -2.33
HLA-DQA1Q5Y7H0 AC090617.8-201ENST00000623339 167 ntBASIC0.52□□□□□ -2.33
HLA-DQA1Q5Y7H0 RNU6-1036P-201ENST00000383959 104 ntBASIC0.51□□□□□ -2.33
HLA-DQA1Q5Y7H0 SNORA49-201ENST00000386157 136 ntBASIC0.51□□□□□ -2.33
HLA-DQA1Q5Y7H0 MIR548V-201ENST00000584165 80 ntBASIC0.51□□□□□ -2.33
HLA-DQA1Q5Y7H0 SNORA9.1-201ENST00000362412 131 ntBASIC0.5□□□□□ -2.33
HLA-DQA1Q5Y7H0 Y_RNA.205-201ENST00000364128 113 ntBASIC0.5□□□□□ -2.33
HLA-DQA1Q5Y7H0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.5□□□□□ -2.33
HLA-DQA1Q5Y7H0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.5□□□□□ -2.33
HLA-DQA1Q5Y7H0 U2.7-201ENST00000619197 100 ntBASIC0.5□□□□□ -2.33
HLA-DQA1Q5Y7H0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
HLA-DQA1Q5Y7H0 RNA5SP215-201ENST00000363440 122 ntBASIC0.49□□□□□ -2.33
HLA-DQA1Q5Y7H0 RNA5SP299-201ENST00000391203 116 ntBASIC0.49□□□□□ -2.33
HLA-DQA1Q5Y7H0 CYP3A54P-201ENST00000566950 75 ntBASIC0.49□□□□□ -2.33
HLA-DQA1Q5Y7H0 MIR4511-201ENST00000582784 87 ntBASIC0.49□□□□□ -2.33
HLA-DQA1Q5Y7H0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
HLA-DQA1Q5Y7H0 RNA5SP62-201ENST00000363457 110 ntBASIC0.48□□□□□ -2.33
HLA-DQA1Q5Y7H0 RNU6-127P-201ENST00000390897 107 ntBASIC0.48□□□□□ -2.33
HLA-DQA1Q5Y7H0 MIR876-201ENST00000401147 81 ntBASIC0.48□□□□□ -2.33
HLA-DQA1Q5Y7H0 RNU6-542P-201ENST00000516405 103 ntBASIC0.48□□□□□ -2.33
HLA-DQA1Q5Y7H0 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
HLA-DQA1Q5Y7H0 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
HLA-DQA1Q5Y7H0 MIR216A-201ENST00000385063 110 ntBASIC0.47□□□□□ -2.33
HLA-DQA1Q5Y7H0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.47□□□□□ -2.33
HLA-DQA1Q5Y7H0 SNORD2-201ENST00000459163 69 ntBASIC0.47□□□□□ -2.33
HLA-DQA1Q5Y7H0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HLA-DQA1Q5Y7H0 MIR9-2-201ENST00000384838 87 ntBASIC0.46□□□□□ -2.34
HLA-DQA1Q5Y7H0 RNU6-337P-201ENST00000391243 106 ntBASIC0.46□□□□□ -2.34
HLA-DQA1Q5Y7H0 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
HLA-DQA1Q5Y7H0 MIR6513-201ENST00000621188 64 ntBASIC0.46□□□□□ -2.34
HLA-DQA1Q5Y7H0 AC103706.3-201ENST00000636297 85 ntBASIC0.46□□□□□ -2.34
HLA-DQA1Q5Y7H0 MIR630-201ENST00000384957 97 ntBASIC0.45□□□□□ -2.34
HLA-DQA1Q5Y7H0 MIR643-201ENST00000385267 97 ntBASIC0.45□□□□□ -2.34
HLA-DQA1Q5Y7H0 snoU13.18-201ENST00000459483 104 ntBASIC0.45□□□□□ -2.34
HLA-DQA1Q5Y7H0 AC022709.1-201ENST00000615967 87 ntBASIC0.45□□□□□ -2.34
HLA-DQA1Q5Y7H0 SNORA75.1-201ENST00000391130 148 ntBASIC0.44□□□□□ -2.34
HLA-DQA1Q5Y7H0 RNU7-174P-201ENST00000516248 59 ntBASIC0.44□□□□□ -2.34
HLA-DQA1Q5Y7H0 AC069113.3-201ENST00000521019 150 ntBASIC0.44□□□□□ -2.34
HLA-DQA1Q5Y7H0 MIR6773-201ENST00000612812 74 ntBASIC0.44□□□□□ -2.34
HLA-DQA1Q5Y7H0 MIR6515-201ENST00000619843 57 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms