Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MIR548AG1-201ENST00000579932 66 ntBASIC1.4□□□□□ -2.19
RNFT1Q5M7Z0 BX248123.2-201ENST00000606318 124 ntBASIC1.4□□□□□ -2.19
RNFT1Q5M7Z0 SNORD115-25-201ENST00000362619 82 ntBASIC1.39□□□□□ -2.19
RNFT1Q5M7Z0 SNORA36.1-201ENST00000363424 132 ntBASIC1.39□□□□□ -2.19
RNFT1Q5M7Z0 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
RNFT1Q5M7Z0 RNA5SP268-201ENST00000516828 124 ntBASIC1.39□□□□□ -2.19
RNFT1Q5M7Z0 AC025627.3-201ENST00000582078 182 ntBASIC1.39□□□□□ -2.19
RNFT1Q5M7Z0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RNFT1Q5M7Z0 RNU6-924P-201ENST00000362926 108 ntBASIC1.38□□□□□ -2.19
RNFT1Q5M7Z0 MIR19B1-201ENST00000384829 87 ntBASIC1.38□□□□□ -2.19
RNFT1Q5M7Z0 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.38□□□□□ -2.19
RNFT1Q5M7Z0 RNU6-1206P-201ENST00000516339 103 ntBASIC1.38□□□□□ -2.19
RNFT1Q5M7Z0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.38□□□□□ -2.19
RNFT1Q5M7Z0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RNFT1Q5M7Z0 RNU4-45P-201ENST00000365469 141 ntBASIC1.37□□□□□ -2.19
RNFT1Q5M7Z0 RNU6-458P-201ENST00000384179 107 ntBASIC1.37□□□□□ -2.19
RNFT1Q5M7Z0 MIR200A-201ENST00000384875 90 ntBASIC1.37□□□□□ -2.19
RNFT1Q5M7Z0 RNU6-337P-201ENST00000391243 106 ntBASIC1.37□□□□□ -2.19
RNFT1Q5M7Z0 TRMT112P2-201ENST00000512910 132 ntBASIC1.37□□□□□ -2.19
RNFT1Q5M7Z0 U6.58-201ENST00000613107 107 ntBASIC1.37□□□□□ -2.19
RNFT1Q5M7Z0 MIR548AL-201ENST00000578416 97 ntBASIC1.36□□□□□ -2.19
RNFT1Q5M7Z0 MIR6773-201ENST00000612812 74 ntBASIC1.36□□□□□ -2.19
RNFT1Q5M7Z0 MIR499A-201ENST00000384903 122 ntBASIC1.35□□□□□ -2.19
RNFT1Q5M7Z0 RNU6-724P-201ENST00000390958 105 ntBASIC1.35□□□□□ -2.19
RNFT1Q5M7Z0 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
RNFT1Q5M7Z0 SNORA31.24-201ENST00000517232 57 ntBASIC1.35□□□□□ -2.19
RNFT1Q5M7Z0 MIR7107-201ENST00000611489 80 ntBASIC1.35□□□□□ -2.19
RNFT1Q5M7Z0 SNORA70.25-201ENST00000612741 95 ntBASIC1.35□□□□□ -2.19
RNFT1Q5M7Z0 MIR18A-201ENST00000362310 71 ntBASIC1.34□□□□□ -2.19
RNFT1Q5M7Z0 MIR1304-201ENST00000408243 91 ntBASIC1.34□□□□□ -2.19
RNFT1Q5M7Z0 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
RNFT1Q5M7Z0 HMGN2P22-201ENST00000427588 175 ntBASIC1.34□□□□□ -2.19
RNFT1Q5M7Z0 MIR5706-201ENST00000579841 80 ntBASIC1.34□□□□□ -2.19
RNFT1Q5M7Z0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
RNFT1Q5M7Z0 Y_RNA.69-201ENST00000362885 109 ntBASIC1.33□□□□□ -2.2
RNFT1Q5M7Z0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.33□□□□□ -2.2
RNFT1Q5M7Z0 MIR4421-201ENST00000578133 69 ntBASIC1.33□□□□□ -2.2
RNFT1Q5M7Z0 RNA5SP327-201ENST00000362494 101 ntBASIC1.32□□□□□ -2.2
RNFT1Q5M7Z0 RNU6-986P-201ENST00000363133 102 ntBASIC1.32□□□□□ -2.2
RNFT1Q5M7Z0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.32□□□□□ -2.2
RNFT1Q5M7Z0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RNFT1Q5M7Z0 SNORD114-29-201ENST00000364819 70 ntBASIC1.31□□□□□ -2.2
RNFT1Q5M7Z0 RNA5SP363-201ENST00000365072 115 ntBASIC1.31□□□□□ -2.2
RNFT1Q5M7Z0 RNA5SP94-201ENST00000516917 108 ntBASIC1.31□□□□□ -2.2
RNFT1Q5M7Z0 MIR8070-201ENST00000616510 88 ntBASIC1.31□□□□□ -2.2
RNFT1Q5M7Z0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.31□□□□□ -2.2
RNFT1Q5M7Z0 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
RNFT1Q5M7Z0 RNU7-151P-201ENST00000516930 53 ntBASIC1.3□□□□□ -2.2
RNFT1Q5M7Z0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
RNFT1Q5M7Z0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
RNFT1Q5M7Z0 RNU6-598P-201ENST00000364017 105 ntBASIC1.29□□□□□ -2.2
RNFT1Q5M7Z0 MIRLET7B-201ENST00000385140 83 ntBASIC1.29□□□□□ -2.2
RNFT1Q5M7Z0 MIR579-201ENST00000385221 98 ntBASIC1.29□□□□□ -2.2
RNFT1Q5M7Z0 SNORA49-201ENST00000386157 136 ntBASIC1.29□□□□□ -2.2
RNFT1Q5M7Z0 SNORD124-201ENST00000459577 104 ntBASIC1.29□□□□□ -2.2
RNFT1Q5M7Z0 RNU6-828P-201ENST00000364876 107 ntBASIC1.28□□□□□ -2.2
RNFT1Q5M7Z0 RNU6-392P-201ENST00000364926 101 ntBASIC1.28□□□□□ -2.2
RNFT1Q5M7Z0 MIR329-2-201ENST00000385029 84 ntBASIC1.28□□□□□ -2.2
RNFT1Q5M7Z0 AL451105.1-201ENST00000450005 189 ntBASIC1.28□□□□□ -2.2
RNFT1Q5M7Z0 MIR7111-201ENST00000619751 72 ntBASIC1.28□□□□□ -2.2
RNFT1Q5M7Z0 RNY1P8-201ENST00000383970 114 ntBASIC1.27□□□□□ -2.21
RNFT1Q5M7Z0 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
RNFT1Q5M7Z0 MIR320A-201ENST00000385302 82 ntBASIC1.27□□□□□ -2.21
RNFT1Q5M7Z0 RNA5SP255-201ENST00000516370 107 ntBASIC1.27□□□□□ -2.21
RNFT1Q5M7Z0 MIR4752-201ENST00000579672 72 ntBASIC1.27□□□□□ -2.21
RNFT1Q5M7Z0 RNU1-29P-201ENST00000606574 126 ntBASIC1.27□□□□□ -2.21
RNFT1Q5M7Z0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.26□□□□□ -2.21
RNFT1Q5M7Z0 RNU6-1204P-201ENST00000363948 107 ntBASIC1.26□□□□□ -2.21
RNFT1Q5M7Z0 MIR125B1-201ENST00000385236 88 ntBASIC1.26□□□□□ -2.21
RNFT1Q5M7Z0 AC011195.1-201ENST00000578177 177 ntBASIC1.26□□□□□ -2.21
RNFT1Q5M7Z0 AL353770.2-201ENST00000620024 78 ntBASIC1.26□□□□□ -2.21
RNFT1Q5M7Z0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
RNFT1Q5M7Z0 Y_RNA.118-201ENST00000363300 101 ntBASIC1.25□□□□□ -2.21
RNFT1Q5M7Z0 SNORD114-24-201ENST00000365029 72 ntBASIC1.25□□□□□ -2.21
RNFT1Q5M7Z0 U2.18-201ENST00000622185 84 ntBASIC1.25□□□□□ -2.21
RNFT1Q5M7Z0 RNU6-502P-201ENST00000362419 108 ntBASIC1.24□□□□□ -2.21
RNFT1Q5M7Z0 Y_RNA.355-201ENST00000365462 98 ntBASIC1.24□□□□□ -2.21
RNFT1Q5M7Z0 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
RNFT1Q5M7Z0 MIR548AA1-201ENST00000384971 97 ntBASIC1.24□□□□□ -2.21
RNFT1Q5M7Z0 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
RNFT1Q5M7Z0 RNU6-995P-201ENST00000391244 107 ntBASIC1.24□□□□□ -2.21
RNFT1Q5M7Z0 SNORD99-201ENST00000408612 74 ntBASIC1.24□□□□□ -2.21
RNFT1Q5M7Z0 U7.6-201ENST00000610841 64 ntBASIC1.24□□□□□ -2.21
RNFT1Q5M7Z0 snoU13.18-201ENST00000459483 104 ntBASIC1.23□□□□□ -2.21
RNFT1Q5M7Z0 RNU6-782P-201ENST00000516852 104 ntBASIC1.22□□□□□ -2.21
RNFT1Q5M7Z0 RNU7-188P-201ENST00000517063 64 ntBASIC1.22□□□□□ -2.21
RNFT1Q5M7Z0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
RNFT1Q5M7Z0 MIR1276-201ENST00000408707 83 ntBASIC1.21□□□□□ -2.22
RNFT1Q5M7Z0 RNU6-175P-201ENST00000516896 107 ntBASIC1.21□□□□□ -2.22
RNFT1Q5M7Z0 MIR7974-201ENST00000615835 79 ntBASIC1.21□□□□□ -2.22
RNFT1Q5M7Z0 RNU1-124P-201ENST00000363861 145 ntBASIC1.2□□□□□ -2.22
RNFT1Q5M7Z0 RNU6-945P-201ENST00000383947 107 ntBASIC1.2□□□□□ -2.22
RNFT1Q5M7Z0 RNA5SP61-201ENST00000516453 100 ntBASIC1.2□□□□□ -2.22
RNFT1Q5M7Z0 AL353803.5-201ENST00000599815 141 ntBASIC1.2□□□□□ -2.22
RNFT1Q5M7Z0 MIR6504-201ENST00000613520 61 ntBASIC1.2□□□□□ -2.22
RNFT1Q5M7Z0 U6.103-201ENST00000637085 61 ntBASIC1.2□□□□□ -2.22
RNFT1Q5M7Z0 RNU6-822P-201ENST00000362707 106 ntBASIC1.19□□□□□ -2.22
RNFT1Q5M7Z0 SNORD45.2-201ENST00000363552 72 ntBASIC1.19□□□□□ -2.22
RNFT1Q5M7Z0 RNU6-1262P-201ENST00000516217 96 ntBASIC1.19□□□□□ -2.22
RNFT1Q5M7Z0 MIR3660-201ENST00000584845 100 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 364.9 ms