Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RNA5SP147-201ENST00000516493 109 ntBASIC-1.64□□□□□ -2.67
CBX1P83916 snoU83B.1-201ENST00000517136 88 ntBASIC-1.64□□□□□ -2.67
CBX1P83916 MIR3914-2-201ENST00000637339 95 ntBASIC-1.64□□□□□ -2.67
CBX1P83916 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.65□□□□□ -2.67
CBX1P83916 RNU6-274P-201ENST00000459566 107 ntBASIC-1.65□□□□□ -2.67
CBX1P83916 MIR6509-201ENST00000614603 85 ntBASIC-1.65□□□□□ -2.67
CBX1P83916 AC012531.4-201ENST00000616509 177 ntBASIC-1.65□□□□□ -2.67
CBX1P83916 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.66□□□□□ -2.68
CBX1P83916 SNORA2.1-201ENST00000363089 137 ntBASIC-1.66□□□□□ -2.68
CBX1P83916 AL445584.3-201ENST00000617173 78 ntBASIC-1.66□□□□□ -2.68
CBX1P83916 RNU6-824P-201ENST00000363724 104 ntBASIC-1.67□□□□□ -2.68
CBX1P83916 SNORA33.1-201ENST00000364957 130 ntBASIC-1.67□□□□□ -2.68
CBX1P83916 MIR203A-201ENST00000384836 110 ntBASIC-1.67□□□□□ -2.68
CBX1P83916 MIR548A3-201ENST00000385297 97 ntBASIC-1.67□□□□□ -2.68
CBX1P83916 SCARNA18B-201ENST00000458806 135 ntBASIC-1.67□□□□□ -2.68
CBX1P83916 RNU7-200P-201ENST00000516105 62 ntBASIC-1.67□□□□□ -2.68
CBX1P83916 SNORD33.1-201ENST00000516213 88 ntBASIC-1.67□□□□□ -2.68
CBX1P83916 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.67□□□□□ -2.68
CBX1P83916 MIR6888-201ENST00000621977 67 ntBASIC-1.67□□□□□ -2.68
CBX1P83916 RNU6-972P-201ENST00000391208 107 ntBASIC-1.68□□□□□ -2.68
CBX1P83916 MIR1255B2-201ENST00000408618 67 ntBASIC-1.68□□□□□ -2.68
CBX1P83916 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.68□□□□□ -2.68
CBX1P83916 U6.95-201ENST00000636931 70 ntBASIC-1.68□□□□□ -2.68
CBX1P83916 AL691482.2-201ENST00000457453 84 ntBASIC-1.69□□□□□ -2.68
CBX1P83916 MIR3657-201ENST00000584818 117 ntBASIC-1.69□□□□□ -2.68
CBX1P83916 SNORD58A-201ENST00000383875 65 ntBASIC-1.7□□□□□ -2.68
CBX1P83916 RNU6-971P-201ENST00000516920 106 ntBASIC-1.7□□□□□ -2.68
CBX1P83916 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.71□□□□□ -2.68
CBX1P83916 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.71□□□□□ -2.68
CBX1P83916 RNU6-887P-201ENST00000410660 100 ntBASIC-1.71□□□□□ -2.68
CBX1P83916 MIR3115-201ENST00000577915 68 ntBASIC-1.71□□□□□ -2.68
CBX1P83916 RNU6-924P-201ENST00000362926 108 ntBASIC-1.72□□□□□ -2.68
CBX1P83916 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.72□□□□□ -2.68
CBX1P83916 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.72□□□□□ -2.68
CBX1P83916 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.72□□□□□ -2.68
CBX1P83916 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.72□□□□□ -2.68
CBX1P83916 CYP3A54P-201ENST00000566950 75 ntBASIC-1.72□□□□□ -2.68
CBX1P83916 MIR378F-201ENST00000578143 78 ntBASIC-1.72□□□□□ -2.68
CBX1P83916 RNA5SP192-201ENST00000364404 120 ntBASIC-1.73□□□□□ -2.69
CBX1P83916 RNU6-80P-201ENST00000384195 107 ntBASIC-1.73□□□□□ -2.69
CBX1P83916 SCARNA23-201ENST00000516060 130 ntBASIC-1.73□□□□□ -2.69
CBX1P83916 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.73□□□□□ -2.69
CBX1P83916 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.74□□□□□ -2.69
CBX1P83916 U6.81-201ENST00000612550 106 ntBASIC-1.75□□□□□ -2.69
CBX1P83916 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.76□□□□□ -2.69
CBX1P83916 RNU6-412P-201ENST00000516434 106 ntBASIC-1.76□□□□□ -2.69
CBX1P83916 AC026421.1-201ENST00000519101 163 ntBASIC-1.76□□□□□ -2.69
CBX1P83916 MIR4796-201ENST00000580742 81 ntBASIC-1.76□□□□□ -2.69
CBX1P83916 SNORD116-10-201ENST00000363791 102 ntBASIC-1.77□□□□□ -2.69
CBX1P83916 RNU6-904P-201ENST00000516206 101 ntBASIC-1.77□□□□□ -2.69
CBX1P83916 MIR4719-201ENST00000585233 84 ntBASIC-1.77□□□□□ -2.69
CBX1P83916 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.77□□□□□ -2.69
CBX1P83916 RNU6-880P-201ENST00000384526 107 ntBASIC-1.78□□□□□ -2.69
CBX1P83916 MIR521-2-201ENST00000384818 87 ntBASIC-1.78□□□□□ -2.69
CBX1P83916 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.79□□□□□ -2.7
CBX1P83916 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.79□□□□□ -2.7
CBX1P83916 SNORA19.1-201ENST00000410656 129 ntBASIC-1.79□□□□□ -2.7
CBX1P83916 RNU6-659P-201ENST00000516454 104 ntBASIC-1.79□□□□□ -2.7
CBX1P83916 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.8□□□□□ -2.7
CBX1P83916 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.8□□□□□ -2.7
CBX1P83916 RNU7-154P-201ENST00000516194 62 ntBASIC-1.8□□□□□ -2.7
CBX1P83916 SNORA26.4-201ENST00000391188 123 ntBASIC-1.81□□□□□ -2.7
CBX1P83916 MIR1236-201ENST00000408340 102 ntBASIC-1.81□□□□□ -2.7
CBX1P83916 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.81□□□□□ -2.7
CBX1P83916 RNU6-346P-201ENST00000516288 111 ntBASIC-1.81□□□□□ -2.7
CBX1P83916 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.81□□□□□ -2.7
CBX1P83916 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.81□□□□□ -2.7
CBX1P83916 MIR4306-201ENST00000583390 91 ntBASIC-1.81□□□□□ -2.7
CBX1P83916 SNORD115-33-201ENST00000363723 82 ntBASIC-1.82□□□□□ -2.7
CBX1P83916 RNY1P5-201ENST00000383890 115 ntBASIC-1.82□□□□□ -2.7
CBX1P83916 AC099654.10-201ENST00000640395 161 ntBASIC-1.82□□□□□ -2.7
CBX1P83916 RNU6-752P-201ENST00000516376 102 ntBASIC-1.83□□□□□ -2.7
CBX1P83916 SNORD116-21-201ENST00000384507 92 ntBASIC-1.84□□□□□ -2.7
CBX1P83916 MIR3165-201ENST00000579874 75 ntBASIC-1.84□□□□□ -2.7
CBX1P83916 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.85□□□□□ -2.71
CBX1P83916 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.85□□□□□ -2.71
CBX1P83916 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.85□□□□□ -2.71
CBX1P83916 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.85□□□□□ -2.71
CBX1P83916 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.85□□□□□ -2.71
CBX1P83916 RNU6-537P-201ENST00000517277 103 ntBASIC-1.85□□□□□ -2.71
CBX1P83916 MIR6739-201ENST00000622461 75 ntBASIC-1.85□□□□□ -2.71
CBX1P83916 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.86□□□□□ -2.71
CBX1P83916 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.86□□□□□ -2.71
CBX1P83916 RNA5SP331-201ENST00000364986 107 ntBASIC-1.86□□□□□ -2.71
CBX1P83916 RNU6-746P-201ENST00000384112 109 ntBASIC-1.86□□□□□ -2.71
CBX1P83916 AL450471.1-201ENST00000447509 127 ntBASIC-1.86□□□□□ -2.71
CBX1P83916 RNU6-518P-201ENST00000516056 96 ntBASIC-1.86□□□□□ -2.71
CBX1P83916 SNORD63.1-201ENST00000516178 80 ntBASIC-1.86□□□□□ -2.71
CBX1P83916 MIR519A2-201ENST00000384990 87 ntBASIC-1.87□□□□□ -2.71
CBX1P83916 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.88□□□□□ -2.71
CBX1P83916 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.88□□□□□ -2.71
CBX1P83916 SNX3P1X-201ENST00000414887 175 ntBASIC-1.88□□□□□ -2.71
CBX1P83916 RNU7-61P-201ENST00000515897 61 ntBASIC-1.88□□□□□ -2.71
CBX1P83916 RNU6-255P-201ENST00000516957 105 ntBASIC-1.88□□□□□ -2.71
CBX1P83916 MIR29B1-201ENST00000385015 81 ntBASIC-1.9□□□□□ -2.71
CBX1P83916 RNU6-907P-201ENST00000390924 102 ntBASIC-1.9□□□□□ -2.71
CBX1P83916 MIR1302-5-201ENST00000408164 150 ntBASIC-1.9□□□□□ -2.71
CBX1P83916 AL021921.1-201ENST00000442774 93 ntBASIC-1.9□□□□□ -2.71
CBX1P83916 AC132825.6-201ENST00000638861 357 ntBASIC-1.9□□□□□ -2.71
CBX1P83916 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms