Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RNU6-971P-201ENST00000516920 106 ntBASIC-1.12□□□□□ -2.59
MSH6P52701 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.12□□□□□ -2.59
MSH6P52701 SNORD90-201ENST00000391145 111 ntBASIC-1.13□□□□□ -2.59
MSH6P52701 RNU6-795P-201ENST00000516323 103 ntBASIC-1.13□□□□□ -2.59
MSH6P52701 AC006254.2-201ENST00000603259 279 ntBASIC-1.13□□□□□ -2.59
MSH6P52701 AC012531.4-201ENST00000616509 177 ntBASIC-1.13□□□□□ -2.59
MSH6P52701 U6.96-201ENST00000636425 70 ntBASIC-1.13□□□□□ -2.59
MSH6P52701 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.14□□□□□ -2.59
MSH6P52701 RNU6-260P-201ENST00000384092 107 ntBASIC-1.14□□□□□ -2.59
MSH6P52701 MIR548A3-201ENST00000385297 97 ntBASIC-1.14□□□□□ -2.59
MSH6P52701 U6.95-201ENST00000636931 70 ntBASIC-1.14□□□□□ -2.59
MSH6P52701 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.15□□□□□ -2.59
MSH6P52701 SNORD58A-201ENST00000383875 65 ntBASIC-1.15□□□□□ -2.59
MSH6P52701 RNY1P5-201ENST00000383890 115 ntBASIC-1.15□□□□□ -2.59
MSH6P52701 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.15□□□□□ -2.59
MSH6P52701 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.15□□□□□ -2.59
MSH6P52701 SNORD18.2-201ENST00000459604 70 ntBASIC-1.15□□□□□ -2.59
MSH6P52701 SNORD33.1-201ENST00000516213 88 ntBASIC-1.15□□□□□ -2.59
MSH6P52701 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.16□□□□□ -2.59
MSH6P52701 RNU6-382P-201ENST00000365181 106 ntBASIC-1.16□□□□□ -2.59
MSH6P52701 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.16□□□□□ -2.59
MSH6P52701 MIR1285-2-201ENST00000408311 88 ntBASIC-1.16□□□□□ -2.59
MSH6P52701 RNU6-274P-201ENST00000459566 107 ntBASIC-1.16□□□□□ -2.59
MSH6P52701 RNU6-346P-201ENST00000516288 111 ntBASIC-1.16□□□□□ -2.59
MSH6P52701 RNU6-659P-201ENST00000516454 104 ntBASIC-1.16□□□□□ -2.59
MSH6P52701 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.16□□□□□ -2.59
MSH6P52701 MIR4441-201ENST00000582623 100 ntBASIC-1.16□□□□□ -2.59
MSH6P52701 MIR4499-201ENST00000584834 69 ntBASIC-1.16□□□□□ -2.59
MSH6P52701 uc_338.19-201ENST00000616808 99 ntBASIC-1.16□□□□□ -2.59
MSH6P52701 RNU6-208P-201ENST00000362431 107 ntBASIC-1.17□□□□□ -2.6
MSH6P52701 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
MSH6P52701 AC090617.8-201ENST00000623339 167 ntBASIC-1.17□□□□□ -2.6
MSH6P52701 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.18□□□□□ -2.6
MSH6P52701 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.18□□□□□ -2.6
MSH6P52701 MIR124-2-201ENST00000385081 109 ntBASIC-1.18□□□□□ -2.6
MSH6P52701 RNU6-972P-201ENST00000391208 107 ntBASIC-1.18□□□□□ -2.6
MSH6P52701 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.18□□□□□ -2.6
MSH6P52701 snoU13.17-201ENST00000458802 104 ntBASIC-1.18□□□□□ -2.6
MSH6P52701 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.18□□□□□ -2.6
MSH6P52701 RNU6-255P-201ENST00000516957 105 ntBASIC-1.18□□□□□ -2.6
MSH6P52701 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.19□□□□□ -2.6
MSH6P52701 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.19□□□□□ -2.6
MSH6P52701 MIR548I1-201ENST00000408810 149 ntBASIC-1.19□□□□□ -2.6
MSH6P52701 SCARNA23-201ENST00000516060 130 ntBASIC-1.19□□□□□ -2.6
MSH6P52701 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.2□□□□□ -2.6
MSH6P52701 MIR147A-201ENST00000385079 72 ntBASIC-1.2□□□□□ -2.6
MSH6P52701 AL353803.5-201ENST00000599815 141 ntBASIC-1.2□□□□□ -2.6
MSH6P52701 RNU6-824P-201ENST00000363724 104 ntBASIC-1.21□□□□□ -2.6
MSH6P52701 RNU6-431P-201ENST00000383874 107 ntBASIC-1.21□□□□□ -2.6
MSH6P52701 RNU6-904P-201ENST00000516206 101 ntBASIC-1.21□□□□□ -2.6
MSH6P52701 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.21□□□□□ -2.6
MSH6P52701 SNORD64-201ENST00000386683 67 ntBASIC-1.21□□□□□ -2.6
MSH6P52701 RNU6-887P-201ENST00000410660 100 ntBASIC-1.21□□□□□ -2.6
MSH6P52701 RNU6-412P-201ENST00000516434 106 ntBASIC-1.21□□□□□ -2.6
MSH6P52701 MIR4464-201ENST00000580818 92 ntBASIC-1.21□□□□□ -2.6
MSH6P52701 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.21□□□□□ -2.6
MSH6P52701 MIR6509-201ENST00000614603 85 ntBASIC-1.21□□□□□ -2.6
MSH6P52701 MIR4773-1-201ENST00000637203 78 ntBASIC-1.21□□□□□ -2.6
MSH6P52701 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.22□□□□□ -2.61
MSH6P52701 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.22□□□□□ -2.61
MSH6P52701 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.22□□□□□ -2.61
MSH6P52701 RNU5F-1-201ENST00000362507 117 ntBASIC-1.23□□□□□ -2.61
MSH6P52701 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.23□□□□□ -2.61
MSH6P52701 RNU6-158P-201ENST00000517104 100 ntBASIC-1.23□□□□□ -2.61
MSH6P52701 AC026421.1-201ENST00000519101 163 ntBASIC-1.23□□□□□ -2.61
MSH6P52701 MIR3657-201ENST00000584818 117 ntBASIC-1.23□□□□□ -2.61
MSH6P52701 SNORA2.1-201ENST00000363089 137 ntBASIC-1.24□□□□□ -2.61
MSH6P52701 MIR203A-201ENST00000384836 110 ntBASIC-1.24□□□□□ -2.61
MSH6P52701 RNU6-907P-201ENST00000390924 102 ntBASIC-1.24□□□□□ -2.61
MSH6P52701 SNORA19.1-201ENST00000410656 129 ntBASIC-1.24□□□□□ -2.61
MSH6P52701 RNA5SP147-201ENST00000516493 109 ntBASIC-1.24□□□□□ -2.61
MSH6P52701 AL445584.3-201ENST00000617173 78 ntBASIC-1.24□□□□□ -2.61
MSH6P52701 MIR6888-201ENST00000621977 67 ntBASIC-1.24□□□□□ -2.61
MSH6P52701 SNORD114-17-201ENST00000364699 75 ntBASIC-1.25□□□□□ -2.61
MSH6P52701 SNORA33.1-201ENST00000364957 130 ntBASIC-1.25□□□□□ -2.61
MSH6P52701 RNU6-880P-201ENST00000384526 107 ntBASIC-1.25□□□□□ -2.61
MSH6P52701 CYP3A54P-201ENST00000566950 75 ntBASIC-1.25□□□□□ -2.61
MSH6P52701 AC140658.3-201ENST00000567603 271 ntBASIC-1.25□□□□□ -2.61
MSH6P52701 SNORD116-21-201ENST00000384507 92 ntBASIC-1.26□□□□□ -2.61
MSH6P52701 AL691482.2-201ENST00000457453 84 ntBASIC-1.26□□□□□ -2.61
MSH6P52701 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.26□□□□□ -2.61
MSH6P52701 SNORD116-10-201ENST00000363791 102 ntBASIC-1.27□□□□□ -2.61
MSH6P52701 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.27□□□□□ -2.61
MSH6P52701 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.27□□□□□ -2.61
MSH6P52701 MIR1255B2-201ENST00000408618 67 ntBASIC-1.27□□□□□ -2.61
MSH6P52701 MIR4306-201ENST00000583390 91 ntBASIC-1.27□□□□□ -2.61
MSH6P52701 U6.81-201ENST00000612550 106 ntBASIC-1.27□□□□□ -2.61
MSH6P52701 MIR382-201ENST00000637119 76 ntBASIC-1.27□□□□□ -2.61
MSH6P52701 RNY4P27-201ENST00000363341 96 ntBASIC-1.28□□□□□ -2.61
MSH6P52701 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.28□□□□□ -2.61
MSH6P52701 MIR4796-201ENST00000580742 81 ntBASIC-1.28□□□□□ -2.61
MSH6P52701 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.28□□□□□ -2.61
MSH6P52701 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.29□□□□□ -2.62
MSH6P52701 MIR1236-201ENST00000408340 102 ntBASIC-1.29□□□□□ -2.62
MSH6P52701 SCARNA18B-201ENST00000458806 135 ntBASIC-1.29□□□□□ -2.62
MSH6P52701 RNA5SP180-201ENST00000516181 101 ntBASIC-1.29□□□□□ -2.62
MSH6P52701 MIR521-2-201ENST00000384818 87 ntBASIC-1.3□□□□□ -2.62
MSH6P52701 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.3□□□□□ -2.62
MSH6P52701 RNU6-794P-201ENST00000517261 64 ntBASIC-1.3□□□□□ -2.62
MSH6P52701 RNU6-537P-201ENST00000517277 103 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 234.1 ms