Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SNORD114-9-201ENST00000364370 72 ntBASIC0.13□□□□□ -2.39
CLCN3P51790 RNU6-652P-201ENST00000365488 107 ntBASIC0.13□□□□□ -2.39
CLCN3P51790 RNU6-242P-201ENST00000384359 107 ntBASIC0.13□□□□□ -2.39
CLCN3P51790 MIR106A-201ENST00000384870 81 ntBASIC0.13□□□□□ -2.39
CLCN3P51790 SNORA26.2-201ENST00000390922 122 ntBASIC0.13□□□□□ -2.39
CLCN3P51790 SNORA75.1-201ENST00000391130 148 ntBASIC0.13□□□□□ -2.39
CLCN3P51790 MIR548E-201ENST00000408287 88 ntBASIC0.13□□□□□ -2.39
CLCN3P51790 AC244090.1-201ENST00000441884 93 ntBASIC0.13□□□□□ -2.39
CLCN3P51790 SCARNA11.2-201ENST00000517183 154 ntBASIC0.13□□□□□ -2.39
CLCN3P51790 Y_RNA.12-201ENST00000362393 112 ntBASIC0.12□□□□□ -2.39
CLCN3P51790 Y_RNA.30-201ENST00000362572 97 ntBASIC0.12□□□□□ -2.39
CLCN3P51790 RNA5SP214-201ENST00000363378 118 ntBASIC0.12□□□□□ -2.39
CLCN3P51790 SNORD114-29-201ENST00000364819 70 ntBASIC0.12□□□□□ -2.39
CLCN3P51790 SNORA49-201ENST00000386157 136 ntBASIC0.12□□□□□ -2.39
CLCN3P51790 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
CLCN3P51790 RNU6-752P-201ENST00000516376 102 ntBASIC0.12□□□□□ -2.39
CLCN3P51790 RNU6-180P-201ENST00000516697 61 ntBASIC0.12□□□□□ -2.39
CLCN3P51790 MIR4712-201ENST00000583750 82 ntBASIC0.12□□□□□ -2.39
CLCN3P51790 AC084368.1-201ENST00000620935 65 ntBASIC0.12□□□□□ -2.39
CLCN3P51790 MIR1245B-201ENST00000636115 69 ntBASIC0.12□□□□□ -2.39
CLCN3P51790 MIR20A-201ENST00000362279 71 ntBASIC0.11□□□□□ -2.39
CLCN3P51790 Y_RNA.94-201ENST00000363068 106 ntBASIC0.11□□□□□ -2.39
CLCN3P51790 Y_RNA.374-201ENST00000365606 101 ntBASIC0.11□□□□□ -2.39
CLCN3P51790 RNU6-1039P-201ENST00000383931 107 ntBASIC0.11□□□□□ -2.39
CLCN3P51790 MIR593-201ENST00000384856 100 ntBASIC0.11□□□□□ -2.39
CLCN3P51790 RNU6-990P-201ENST00000364385 104 ntBASIC0.1□□□□□ -2.39
CLCN3P51790 Y_RNA.681-201ENST00000516445 113 ntBASIC0.1□□□□□ -2.39
CLCN3P51790 RNU6-303P-201ENST00000517091 106 ntBASIC0.1□□□□□ -2.39
CLCN3P51790 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
CLCN3P51790 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.1□□□□□ -2.39
CLCN3P51790 MIR4773-1-201ENST00000637203 78 ntBASIC0.1□□□□□ -2.39
CLCN3P51790 SNORD114-5-201ENST00000362928 70 ntBASIC0.09□□□□□ -2.4
CLCN3P51790 RNA5SP173-201ENST00000364857 136 ntBASIC0.09□□□□□ -2.4
CLCN3P51790 Y_RNA.313-201ENST00000365095 103 ntBASIC0.09□□□□□ -2.4
CLCN3P51790 Y_RNA.371-201ENST00000365591 113 ntBASIC0.09□□□□□ -2.4
CLCN3P51790 MIR892B-201ENST00000401279 77 ntBASIC0.09□□□□□ -2.4
CLCN3P51790 Y_RNA.633-201ENST00000459107 95 ntBASIC0.09□□□□□ -2.4
CLCN3P51790 RNU6-274P-201ENST00000459566 107 ntBASIC0.09□□□□□ -2.4
CLCN3P51790 AC145423.2-201ENST00000610631 239 ntBASIC0.09□□□□□ -2.4
CLCN3P51790 RNU6-681P-201ENST00000364012 104 ntBASIC0.08□□□□□ -2.4
CLCN3P51790 MIR145-201ENST00000384967 88 ntBASIC0.08□□□□□ -2.4
CLCN3P51790 MIR610-201ENST00000385139 96 ntBASIC0.08□□□□□ -2.4
CLCN3P51790 RNU7-165P-201ENST00000458864 60 ntBASIC0.08□□□□□ -2.4
CLCN3P51790 RNA5SP395-201ENST00000516567 118 ntBASIC0.08□□□□□ -2.4
CLCN3P51790 CR383656.4-201ENST00000546909 122 ntBASIC0.08□□□□□ -2.4
CLCN3P51790 MIR4290-201ENST00000583807 95 ntBASIC0.08□□□□□ -2.4
CLCN3P51790 MIR148A-201ENST00000362215 68 ntBASIC0.07□□□□□ -2.4
CLCN3P51790 Y_RNA.219-201ENST00000364232 113 ntBASIC0.07□□□□□ -2.4
CLCN3P51790 RNU6-573P-201ENST00000383938 106 ntBASIC0.07□□□□□ -2.4
CLCN3P51790 RNU6-260P-201ENST00000384092 107 ntBASIC0.07□□□□□ -2.4
CLCN3P51790 MIR3657-201ENST00000584818 117 ntBASIC0.07□□□□□ -2.4
CLCN3P51790 MIR3202-2-201ENST00000635980 79 ntBASIC0.07□□□□□ -2.4
CLCN3P51790 SNORA2.1-201ENST00000363089 137 ntBASIC0.06□□□□□ -2.4
CLCN3P51790 MIR6509-201ENST00000614603 85 ntBASIC0.06□□□□□ -2.4
CLCN3P51790 MIR1297-201ENST00000637311 77 ntBASIC0.06□□□□□ -2.4
CLCN3P51790 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
CLCN3P51790 RNU6-228P-201ENST00000362700 106 ntBASIC0.05□□□□□ -2.4
CLCN3P51790 Y_RNA.68-201ENST00000362881 102 ntBASIC0.05□□□□□ -2.4
CLCN3P51790 RNU6-330P-201ENST00000363015 107 ntBASIC0.05□□□□□ -2.4
CLCN3P51790 SNORA63.6-201ENST00000364921 119 ntBASIC0.05□□□□□ -2.4
CLCN3P51790 RNA5SP163-201ENST00000410304 99 ntBASIC0.05□□□□□ -2.4
CLCN3P51790 Y_RNA.250-201ENST00000364542 110 ntBASIC0.04□□□□□ -2.4
CLCN3P51790 AL691482.2-201ENST00000457453 84 ntBASIC0.04□□□□□ -2.4
CLCN3P51790 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.04□□□□□ -2.4
CLCN3P51790 MIR5190-201ENST00000581537 80 ntBASIC0.04□□□□□ -2.4
CLCN3P51790 MIR6514-201ENST00000622549 70 ntBASIC0.04□□□□□ -2.4
CLCN3P51790 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.04□□□□□ -2.4
CLCN3P51790 SNORD2-201ENST00000459163 69 ntBASIC0.03□□□□□ -2.4
CLCN3P51790 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.03□□□□□ -2.4
CLCN3P51790 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
CLCN3P51790 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.03□□□□□ -2.4
CLCN3P51790 RNU6-1036P-201ENST00000383959 104 ntBASIC0.02□□□□□ -2.41
CLCN3P51790 RNA5SP285-201ENST00000516619 119 ntBASIC0.02□□□□□ -2.41
CLCN3P51790 RNU6-1094P-201ENST00000362416 104 ntBASIC0.01□□□□□ -2.41
CLCN3P51790 RNU6-929P-201ENST00000384429 107 ntBASIC0.01□□□□□ -2.41
CLCN3P51790 MIR203A-201ENST00000384836 110 ntBASIC0.01□□□□□ -2.41
CLCN3P51790 RNU6-279P-201ENST00000391297 101 ntBASIC0.01□□□□□ -2.41
CLCN3P51790 RNU7-159P-201ENST00000459284 62 ntBASIC0.01□□□□□ -2.41
CLCN3P51790 MIR6507-201ENST00000613630 70 ntBASIC0.01□□□□□ -2.41
CLCN3P51790 MIR6739-201ENST00000622461 75 ntBASIC0.01□□□□□ -2.41
CLCN3P51790 RNA5SP98-201ENST00000363158 137 ntBASIC0□□□□□ -2.41
CLCN3P51790 RNU6-1124P-201ENST00000384169 107 ntBASIC0□□□□□ -2.41
CLCN3P51790 MIR329-2-201ENST00000385029 84 ntBASIC0□□□□□ -2.41
CLCN3P51790 SNORD78.1-201ENST00000390866 65 ntBASIC0□□□□□ -2.41
CLCN3P51790 SCARNA18B-201ENST00000458806 135 ntBASIC0□□□□□ -2.41
CLCN3P51790 RNU6-807P-201ENST00000516805 107 ntBASIC0□□□□□ -2.41
CLCN3P51790 MIR3675-201ENST00000583661 73 ntBASIC0□□□□□ -2.41
CLCN3P51790 MIR655-201ENST00000362159 97 ntBASIC-0.01□□□□□ -2.41
CLCN3P51790 RNU6-502P-201ENST00000362419 108 ntBASIC-0.01□□□□□ -2.41
CLCN3P51790 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
CLCN3P51790 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.01□□□□□ -2.41
CLCN3P51790 SNORA8.1-201ENST00000384250 140 ntBASIC-0.01□□□□□ -2.41
CLCN3P51790 RNU6-380P-201ENST00000410207 107 ntBASIC-0.01□□□□□ -2.41
CLCN3P51790 snoU13.13-201ENST00000458842 104 ntBASIC-0.01□□□□□ -2.41
CLCN3P51790 AC021146.9-201ENST00000512503 156 ntBASIC-0.01□□□□□ -2.41
CLCN3P51790 SNORD115-25-201ENST00000362619 82 ntBASIC-0.02□□□□□ -2.41
CLCN3P51790 RNU6-337P-201ENST00000391243 106 ntBASIC-0.02□□□□□ -2.41
CLCN3P51790 MIR1255A-201ENST00000408338 113 ntBASIC-0.02□□□□□ -2.41
CLCN3P51790 SNORA72.7-201ENST00000516349 94 ntBASIC-0.02□□□□□ -2.41
CLCN3P51790 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms