Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 snoU13.17-201ENST00000458802 104 ntBASIC-0.89□□□□□ -2.55
CXCL12P48061 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.89□□□□□ -2.55
CXCL12P48061 RNU6-412P-201ENST00000516434 106 ntBASIC-0.89□□□□□ -2.55
CXCL12P48061 AC026421.1-201ENST00000519101 163 ntBASIC-0.89□□□□□ -2.55
CXCL12P48061 YWHAEP3-201ENST00000582767 121 ntBASIC-0.89□□□□□ -2.55
CXCL12P48061 RNU6-208P-201ENST00000362431 107 ntBASIC-0.9□□□□□ -2.55
CXCL12P48061 RNU6-824P-201ENST00000363724 104 ntBASIC-0.9□□□□□ -2.55
CXCL12P48061 SNORD114-25-201ENST00000363742 72 ntBASIC-0.9□□□□□ -2.55
CXCL12P48061 MIR203A-201ENST00000384836 110 ntBASIC-0.9□□□□□ -2.55
CXCL12P48061 MIR124-2-201ENST00000385081 109 ntBASIC-0.9□□□□□ -2.55
CXCL12P48061 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
CXCL12P48061 SNORD18.2-201ENST00000459604 70 ntBASIC-0.9□□□□□ -2.55
CXCL12P48061 RNA5SP147-201ENST00000516493 109 ntBASIC-0.9□□□□□ -2.55
CXCL12P48061 RNU6-794P-201ENST00000517261 64 ntBASIC-0.9□□□□□ -2.55
CXCL12P48061 RNU5F-1-201ENST00000362507 117 ntBASIC-0.91□□□□□ -2.56
CXCL12P48061 SNORD116-14-201ENST00000383894 92 ntBASIC-0.91□□□□□ -2.56
CXCL12P48061 SNORD116-17-201ENST00000383929 92 ntBASIC-0.91□□□□□ -2.56
CXCL12P48061 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.91□□□□□ -2.56
CXCL12P48061 SNORD116-15-201ENST00000384445 92 ntBASIC-0.91□□□□□ -2.56
CXCL12P48061 SNORD116-19-201ENST00000384729 92 ntBASIC-0.91□□□□□ -2.56
CXCL12P48061 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.91□□□□□ -2.56
CXCL12P48061 SNORA62.4-201ENST00000365504 151 ntBASIC-0.92□□□□□ -2.56
CXCL12P48061 MIR3681-201ENST00000580089 72 ntBASIC-0.92□□□□□ -2.56
CXCL12P48061 MIR6509-201ENST00000614603 85 ntBASIC-0.92□□□□□ -2.56
CXCL12P48061 SNORA33.1-201ENST00000364957 130 ntBASIC-0.93□□□□□ -2.56
CXCL12P48061 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.93□□□□□ -2.56
CXCL12P48061 AL353803.5-201ENST00000599815 141 ntBASIC-0.93□□□□□ -2.56
CXCL12P48061 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.94□□□□□ -2.56
CXCL12P48061 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.94□□□□□ -2.56
CXCL12P48061 MIR196A1-201ENST00000388006 70 ntBASIC-0.94□□□□□ -2.56
CXCL12P48061 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.94□□□□□ -2.56
CXCL12P48061 MIR3657-201ENST00000584818 117 ntBASIC-0.94□□□□□ -2.56
CXCL12P48061 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.95□□□□□ -2.56
CXCL12P48061 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.95□□□□□ -2.56
CXCL12P48061 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.95□□□□□ -2.56
CXCL12P48061 MIR590-201ENST00000385008 97 ntBASIC-0.95□□□□□ -2.56
CXCL12P48061 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.95□□□□□ -2.56
CXCL12P48061 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.95□□□□□ -2.56
CXCL12P48061 AL691482.2-201ENST00000457453 84 ntBASIC-0.95□□□□□ -2.56
CXCL12P48061 RNU7-61P-201ENST00000515897 61 ntBASIC-0.95□□□□□ -2.56
CXCL12P48061 MIR4796-201ENST00000580742 81 ntBASIC-0.95□□□□□ -2.56
CXCL12P48061 MIR4464-201ENST00000580818 92 ntBASIC-0.95□□□□□ -2.56
CXCL12P48061 SNORA2.1-201ENST00000363089 137 ntBASIC-0.96□□□□□ -2.56
CXCL12P48061 SNORD116-10-201ENST00000363791 102 ntBASIC-0.96□□□□□ -2.56
CXCL12P48061 RNU6-537P-201ENST00000517277 103 ntBASIC-0.96□□□□□ -2.56
CXCL12P48061 MIR3133-201ENST00000583157 78 ntBASIC-0.96□□□□□ -2.56
CXCL12P48061 MIR4723-201ENST00000585070 81 ntBASIC-0.96□□□□□ -2.56
CXCL12P48061 MIR587-201ENST00000384845 96 ntBASIC-0.97□□□□□ -2.56
CXCL12P48061 MIR1302-5-201ENST00000408164 150 ntBASIC-0.97□□□□□ -2.56
CXCL12P48061 MIR1255B2-201ENST00000408618 67 ntBASIC-0.97□□□□□ -2.56
CXCL12P48061 RNU6-274P-201ENST00000459566 107 ntBASIC-0.97□□□□□ -2.56
CXCL12P48061 U6.81-201ENST00000612550 106 ntBASIC-0.97□□□□□ -2.56
CXCL12P48061 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.97□□□□□ -2.56
CXCL12P48061 MIR6888-201ENST00000621977 67 ntBASIC-0.97□□□□□ -2.56
CXCL12P48061 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.98□□□□□ -2.57
CXCL12P48061 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.98□□□□□ -2.57
CXCL12P48061 SNORD114-17-201ENST00000364699 75 ntBASIC-0.98□□□□□ -2.57
CXCL12P48061 RNU6-431P-201ENST00000383874 107 ntBASIC-0.98□□□□□ -2.57
CXCL12P48061 SNORD64-201ENST00000386683 67 ntBASIC-0.98□□□□□ -2.57
CXCL12P48061 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.98□□□□□ -2.57
CXCL12P48061 AL500527.2-201ENST00000454105 95 ntBASIC-0.98□□□□□ -2.57
CXCL12P48061 RNU6-162P-201ENST00000516228 103 ntBASIC-0.98□□□□□ -2.57
CXCL12P48061 RNU6-774P-201ENST00000363238 107 ntBASIC-0.99□□□□□ -2.57
CXCL12P48061 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.99□□□□□ -2.57
CXCL12P48061 SNORD83B-201ENST00000386745 93 ntBASIC-0.99□□□□□ -2.57
CXCL12P48061 MIR1236-201ENST00000408340 102 ntBASIC-0.99□□□□□ -2.57
CXCL12P48061 RNU6-109P-201ENST00000516364 107 ntBASIC-0.99□□□□□ -2.57
CXCL12P48061 RNU7-153P-201ENST00000516455 62 ntBASIC-0.99□□□□□ -2.57
CXCL12P48061 RNU6-184P-201ENST00000516514 107 ntBASIC-0.99□□□□□ -2.57
CXCL12P48061 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.99□□□□□ -2.57
CXCL12P48061 CYP3A54P-201ENST00000566950 75 ntBASIC-0.99□□□□□ -2.57
CXCL12P48061 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.99□□□□□ -2.57
CXCL12P48061 AL445584.3-201ENST00000617173 78 ntBASIC-0.99□□□□□ -2.57
CXCL12P48061 RNU6-704P-201ENST00000364162 103 ntBASIC-1□□□□□ -2.57
CXCL12P48061 MIR147A-201ENST00000385079 72 ntBASIC-1□□□□□ -2.57
CXCL12P48061 RNA5SP470-201ENST00000516463 106 ntBASIC-1□□□□□ -2.57
CXCL12P48061 U7.3-201ENST00000616123 62 ntBASIC-1□□□□□ -2.57
CXCL12P48061 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.01□□□□□ -2.57
CXCL12P48061 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.01□□□□□ -2.57
CXCL12P48061 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.01□□□□□ -2.57
CXCL12P48061 RNU6-209P-201ENST00000384118 107 ntBASIC-1.01□□□□□ -2.57
CXCL12P48061 AL078595.1-201ENST00000404458 226 ntBASIC-1.01□□□□□ -2.57
CXCL12P48061 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.01□□□□□ -2.57
CXCL12P48061 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.02□□□□□ -2.57
CXCL12P48061 RNU6-554P-201ENST00000410466 106 ntBASIC-1.02□□□□□ -2.57
CXCL12P48061 RNU6-106P-201ENST00000384405 107 ntBASIC-1.03□□□□□ -2.57
CXCL12P48061 SNORA19-201ENST00000384737 128 ntBASIC-1.03□□□□□ -2.57
CXCL12P48061 RNY1P7-201ENST00000384743 110 ntBASIC-1.03□□□□□ -2.57
CXCL12P48061 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.03□□□□□ -2.57
CXCL12P48061 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.04□□□□□ -2.58
CXCL12P48061 MIR521-2-201ENST00000384818 87 ntBASIC-1.04□□□□□ -2.58
CXCL12P48061 AL450471.1-201ENST00000447509 127 ntBASIC-1.04□□□□□ -2.58
CXCL12P48061 MIR382-201ENST00000637119 76 ntBASIC-1.04□□□□□ -2.58
CXCL12P48061 MIR198-201ENST00000637333 62 ntBASIC-1.04□□□□□ -2.58
CXCL12P48061 SNORD115-27-201ENST00000364430 82 ntBASIC-1.05□□□□□ -2.58
CXCL12P48061 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.05□□□□□ -2.58
CXCL12P48061 RNU6-959P-201ENST00000384671 107 ntBASIC-1.05□□□□□ -2.58
CXCL12P48061 AC140658.3-201ENST00000567603 271 ntBASIC-1.05□□□□□ -2.58
CXCL12P48061 uc_338.19-201ENST00000616808 99 ntBASIC-1.05□□□□□ -2.58
CXCL12P48061 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms