Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MIR519A2-201ENST00000384990 87 ntBASIC-1.16□□□□□ -2.6
BRCA1P38398 RNU6-972P-201ENST00000391208 107 ntBASIC-1.16□□□□□ -2.6
BRCA1P38398 AL158147.1-201ENST00000443970 75 ntBASIC-1.16□□□□□ -2.6
BRCA1P38398 RNU6-706P-201ENST00000517229 104 ntBASIC-1.16□□□□□ -2.6
BRCA1P38398 MTND5P41-201ENST00000517498 206 ntBASIC-1.16□□□□□ -2.6
BRCA1P38398 RNU6-681P-201ENST00000364012 104 ntBASIC-1.17□□□□□ -2.6
BRCA1P38398 SNORA26.4-201ENST00000391188 123 ntBASIC-1.17□□□□□ -2.6
BRCA1P38398 RNU7-154P-201ENST00000516194 62 ntBASIC-1.17□□□□□ -2.6
BRCA1P38398 MIR6888-201ENST00000621977 67 ntBASIC-1.17□□□□□ -2.6
BRCA1P38398 RNU6-813P-201ENST00000384691 107 ntBASIC-1.18□□□□□ -2.6
BRCA1P38398 SNORA40-201ENST00000388090 126 ntBASIC-1.18□□□□□ -2.6
BRCA1P38398 RNU6-887P-201ENST00000410660 100 ntBASIC-1.18□□□□□ -2.6
BRCA1P38398 SCARNA18B-201ENST00000458806 135 ntBASIC-1.18□□□□□ -2.6
BRCA1P38398 snoU83B.1-201ENST00000517136 88 ntBASIC-1.18□□□□□ -2.6
BRCA1P38398 MIR4777-201ENST00000583710 86 ntBASIC-1.18□□□□□ -2.6
BRCA1P38398 AC103810.7-201ENST00000607821 91 ntBASIC-1.18□□□□□ -2.6
BRCA1P38398 RNU6-382P-201ENST00000365181 106 ntBASIC-1.18□□□□□ -2.6
BRCA1P38398 MIR548I1-201ENST00000408810 149 ntBASIC-1.18□□□□□ -2.6
BRCA1P38398 AC006254.2-201ENST00000603259 279 ntBASIC-1.18□□□□□ -2.6
BRCA1P38398 RNU5F-1-201ENST00000362507 117 ntBASIC-1.19□□□□□ -2.6
BRCA1P38398 SNORA33.1-201ENST00000364957 130 ntBASIC-1.19□□□□□ -2.6
BRCA1P38398 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.19□□□□□ -2.6
BRCA1P38398 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.19□□□□□ -2.6
BRCA1P38398 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.19□□□□□ -2.6
BRCA1P38398 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.19□□□□□ -2.6
BRCA1P38398 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.19□□□□□ -2.6
BRCA1P38398 AL035470.1-201ENST00000622571 220 ntBASIC-1.19□□□□□ -2.6
BRCA1P38398 RNU6-412P-201ENST00000516434 106 ntBASIC-1.2□□□□□ -2.6
BRCA1P38398 RNA5SP470-201ENST00000516463 106 ntBASIC-1.2□□□□□ -2.6
BRCA1P38398 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.2□□□□□ -2.6
BRCA1P38398 AL157777.2-201ENST00000258070 137 ntBASIC-1.2□□□□□ -2.6
BRCA1P38398 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.2□□□□□ -2.6
BRCA1P38398 RNU6-824P-201ENST00000363724 104 ntBASIC-1.2□□□□□ -2.6
BRCA1P38398 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.2□□□□□ -2.6
BRCA1P38398 RNU6-804P-201ENST00000384286 107 ntBASIC-1.2□□□□□ -2.6
BRCA1P38398 MIR1207-201ENST00000408249 87 ntBASIC-1.2□□□□□ -2.6
BRCA1P38398 MIR1285-2-201ENST00000408311 88 ntBASIC-1.2□□□□□ -2.6
BRCA1P38398 RNU7-61P-201ENST00000515897 61 ntBASIC-1.2□□□□□ -2.6
BRCA1P38398 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.2□□□□□ -2.6
BRCA1P38398 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.21□□□□□ -2.6
BRCA1P38398 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.21□□□□□ -2.6
BRCA1P38398 RNU6-463P-201ENST00000384340 107 ntBASIC-1.21□□□□□ -2.6
BRCA1P38398 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.21□□□□□ -2.6
BRCA1P38398 AL500527.2-201ENST00000454105 95 ntBASIC-1.21□□□□□ -2.6
BRCA1P38398 MIR4464-201ENST00000580818 92 ntBASIC-1.21□□□□□ -2.6
BRCA1P38398 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.22□□□□□ -2.6
BRCA1P38398 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.22□□□□□ -2.6
BRCA1P38398 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.22□□□□□ -2.6
BRCA1P38398 MIR569-201ENST00000385228 96 ntBASIC-1.22□□□□□ -2.6
BRCA1P38398 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.22□□□□□ -2.61
BRCA1P38398 MIR548A3-201ENST00000385297 97 ntBASIC-1.22□□□□□ -2.61
BRCA1P38398 RNU6-795P-201ENST00000516323 103 ntBASIC-1.22□□□□□ -2.61
BRCA1P38398 RNU6-182P-201ENST00000516970 105 ntBASIC-1.22□□□□□ -2.61
BRCA1P38398 U7.5-201ENST00000517224 61 ntBASIC-1.22□□□□□ -2.61
BRCA1P38398 MIR4490-201ENST00000582647 84 ntBASIC-1.22□□□□□ -2.61
BRCA1P38398 AC104996.3-201ENST00000590718 94 ntBASIC-1.22□□□□□ -2.61
BRCA1P38398 uc_338.19-201ENST00000616808 99 ntBASIC-1.22□□□□□ -2.61
BRCA1P38398 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.23□□□□□ -2.61
BRCA1P38398 RNU6-257P-201ENST00000410238 98 ntBASIC-1.23□□□□□ -2.61
BRCA1P38398 MIR4773-1-201ENST00000637203 78 ntBASIC-1.23□□□□□ -2.61
BRCA1P38398 MIR147A-201ENST00000385079 72 ntBASIC-1.24□□□□□ -2.61
BRCA1P38398 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
BRCA1P38398 MIR3115-201ENST00000577915 68 ntBASIC-1.24□□□□□ -2.61
BRCA1P38398 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
BRCA1P38398 SNORA2.1-201ENST00000363089 137 ntBASIC-1.24□□□□□ -2.61
BRCA1P38398 SNORD116-10-201ENST00000363791 102 ntBASIC-1.24□□□□□ -2.61
BRCA1P38398 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.24□□□□□ -2.61
BRCA1P38398 SCARNA23-201ENST00000516060 130 ntBASIC-1.24□□□□□ -2.61
BRCA1P38398 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.24□□□□□ -2.61
BRCA1P38398 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.25□□□□□ -2.61
BRCA1P38398 RNU6-537P-201ENST00000517277 103 ntBASIC-1.26□□□□□ -2.61
BRCA1P38398 MIR4796-201ENST00000580742 81 ntBASIC-1.26□□□□□ -2.61
BRCA1P38398 AC012531.4-201ENST00000616509 177 ntBASIC-1.26□□□□□ -2.61
BRCA1P38398 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.26□□□□□ -2.61
BRCA1P38398 RNU7-107P-201ENST00000459121 61 ntBASIC-1.26□□□□□ -2.61
BRCA1P38398 MIR1236-201ENST00000408340 102 ntBASIC-1.27□□□□□ -2.61
BRCA1P38398 MIR527-201ENST00000385244 85 ntBASIC-1.29□□□□□ -2.62
BRCA1P38398 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.29□□□□□ -2.62
BRCA1P38398 RNU7-200P-201ENST00000516105 62 ntBASIC-1.29□□□□□ -2.62
BRCA1P38398 SNORD33.1-201ENST00000516213 88 ntBASIC-1.29□□□□□ -2.62
BRCA1P38398 MIR4441-201ENST00000582623 100 ntBASIC-1.29□□□□□ -2.62
BRCA1P38398 MIR4719-201ENST00000585233 84 ntBASIC-1.29□□□□□ -2.62
BRCA1P38398 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.29□□□□□ -2.62
BRCA1P38398 SNORD115-33-201ENST00000363723 82 ntBASIC-1.29□□□□□ -2.62
BRCA1P38398 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.29□□□□□ -2.62
BRCA1P38398 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.29□□□□□ -2.62
BRCA1P38398 RNU6-971P-201ENST00000516920 106 ntBASIC-1.29□□□□□ -2.62
BRCA1P38398 RNU6-576P-201ENST00000390854 102 ntBASIC-1.31□□□□□ -2.62
BRCA1P38398 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.31□□□□□ -2.62
BRCA1P38398 RNU6-158P-201ENST00000517104 100 ntBASIC-1.31□□□□□ -2.62
BRCA1P38398 U4.2-201ENST00000618561 85 ntBASIC-1.31□□□□□ -2.62
BRCA1P38398 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.32□□□□□ -2.62
BRCA1P38398 RNU7-88P-201ENST00000458752 63 ntBASIC-1.32□□□□□ -2.62
BRCA1P38398 AC138207.3-201ENST00000585289 166 ntBASIC-1.32□□□□□ -2.62
BRCA1P38398 MIR6818-201ENST00000621576 65 ntBASIC-1.32□□□□□ -2.62
BRCA1P38398 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.33□□□□□ -2.62
BRCA1P38398 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.33□□□□□ -2.62
BRCA1P38398 MIR3914-2-201ENST00000637339 95 ntBASIC-1.33□□□□□ -2.62
BRCA1P38398 RNU6-624P-201ENST00000363411 107 ntBASIC-1.33□□□□□ -2.62
BRCA1P38398 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 313 ms