Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RNU6-1187P-201ENST00000364771 110 ntBASIC0.75□□□□□ -2.29
COL11A2P13942 RNU6-895P-201ENST00000384125 103 ntBASIC0.75□□□□□ -2.29
COL11A2P13942 AC098934.3-201ENST00000430450 190 ntBASIC0.75□□□□□ -2.29
COL11A2P13942 MTND4LP1-201ENST00000446263 157 ntBASIC0.75□□□□□ -2.29
COL11A2P13942 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.75□□□□□ -2.29
COL11A2P13942 RNU6-800P-201ENST00000384473 103 ntBASIC0.75□□□□□ -2.29
COL11A2P13942 SNORD110-201ENST00000408189 75 ntBASIC0.75□□□□□ -2.29
COL11A2P13942 RNA5SP222-201ENST00000411039 105 ntBASIC0.75□□□□□ -2.29
COL11A2P13942 RNU6-881P-201ENST00000516813 102 ntBASIC0.75□□□□□ -2.29
COL11A2P13942 SNORA25.4-201ENST00000363666 124 ntBASIC0.74□□□□□ -2.29
COL11A2P13942 SNORD116-24-201ENST00000384549 92 ntBASIC0.74□□□□□ -2.29
COL11A2P13942 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
COL11A2P13942 RPL39P28-201ENST00000465655 155 ntBASIC0.74□□□□□ -2.29
COL11A2P13942 AL353765.1-201ENST00000605514 183 ntBASIC0.74□□□□□ -2.29
COL11A2P13942 AC243829.6-201ENST00000612652 106 ntBASIC0.74□□□□□ -2.29
COL11A2P13942 RNA5SP268-201ENST00000516828 124 ntBASIC0.73□□□□□ -2.29
COL11A2P13942 RNU6-1216P-201ENST00000362590 107 ntBASIC0.72□□□□□ -2.29
COL11A2P13942 RNU6-1162P-201ENST00000384443 104 ntBASIC0.72□□□□□ -2.29
COL11A2P13942 MIR521-2-201ENST00000384818 87 ntBASIC0.72□□□□□ -2.29
COL11A2P13942 RNA5SP147-201ENST00000516493 109 ntBASIC0.72□□□□□ -2.29
COL11A2P13942 RNU6-656P-201ENST00000516785 107 ntBASIC0.72□□□□□ -2.29
COL11A2P13942 RNA5SP94-201ENST00000516917 108 ntBASIC0.72□□□□□ -2.29
COL11A2P13942 MIR4511-201ENST00000582784 87 ntBASIC0.72□□□□□ -2.29
COL11A2P13942 U6.111-201ENST00000636093 83 ntBASIC0.72□□□□□ -2.29
COL11A2P13942 SNORA15B-2-201ENST00000384058 135 ntBASIC0.72□□□□□ -2.29
COL11A2P13942 SNORA15B-1-201ENST00000384334 135 ntBASIC0.72□□□□□ -2.29
COL11A2P13942 RNU6-35P-201ENST00000384530 107 ntBASIC0.72□□□□□ -2.29
COL11A2P13942 RNU6-1089P-201ENST00000516473 104 ntBASIC0.72□□□□□ -2.29
COL11A2P13942 MIR5706-201ENST00000579841 80 ntBASIC0.72□□□□□ -2.29
COL11A2P13942 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.71□□□□□ -2.3
COL11A2P13942 snoU13.13-201ENST00000458842 104 ntBASIC0.71□□□□□ -2.3
COL11A2P13942 RNA5SP484-201ENST00000458857 111 ntBASIC0.71□□□□□ -2.3
COL11A2P13942 SCARNA17.3-201ENST00000516381 125 ntBASIC0.71□□□□□ -2.3
COL11A2P13942 SNORA2.1-201ENST00000363089 137 ntBASIC0.7□□□□□ -2.3
COL11A2P13942 SNORA2A-201ENST00000383885 135 ntBASIC0.7□□□□□ -2.3
COL11A2P13942 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
COL11A2P13942 SNORA36.2-201ENST00000384004 127 ntBASIC0.69□□□□□ -2.3
COL11A2P13942 AC110620.1-201ENST00000416042 228 ntBASIC0.69□□□□□ -2.3
COL11A2P13942 AC092634.7-201ENST00000621022 103 ntBASIC0.69□□□□□ -2.3
COL11A2P13942 SNORA25.5-201ENST00000363782 126 ntBASIC0.69□□□□□ -2.3
COL11A2P13942 Y_RNA.443-201ENST00000384135 111 ntBASIC0.69□□□□□ -2.3
COL11A2P13942 RNU6-604P-201ENST00000390917 100 ntBASIC0.69□□□□□ -2.3
COL11A2P13942 AC103706.3-201ENST00000636297 85 ntBASIC0.69□□□□□ -2.3
COL11A2P13942 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.69□□□□□ -2.3
COL11A2P13942 MIR20A-201ENST00000362279 71 ntBASIC0.68□□□□□ -2.3
COL11A2P13942 RNU6-940P-201ENST00000363433 104 ntBASIC0.68□□□□□ -2.3
COL11A2P13942 SNORD118-201ENST00000363593 134 ntBASIC0.68□□□□□ -2.3
COL11A2P13942 SNORD2-201ENST00000459163 69 ntBASIC0.68□□□□□ -2.3
COL11A2P13942 RNA5SP227-201ENST00000516184 113 ntBASIC0.68□□□□□ -2.3
COL11A2P13942 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.68□□□□□ -2.3
COL11A2P13942 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
COL11A2P13942 Y_RNA.125-201ENST00000363371 111 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 RNU6-668P-201ENST00000364180 107 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 Y_RNA.375-201ENST00000365625 101 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 MIR9-2-201ENST00000384838 87 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 HMGN2P22-201ENST00000427588 175 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 AC069271.1-201ENST00000445577 156 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 Y_RNA.423-201ENST00000384057 113 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 AC006210.1-201ENST00000424882 111 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 RNU6-848P-201ENST00000515948 107 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 RNU6-617P-201ENST00000516147 107 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 RNU6-473P-201ENST00000516164 107 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 RNU6-1049P-201ENST00000516414 107 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 SNORA40.17-201ENST00000517256 115 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 AL627230.5-201ENST00000619807 58 ntBASIC0.67□□□□□ -2.3
COL11A2P13942 RNU6-990P-201ENST00000364385 104 ntBASIC0.66□□□□□ -2.3
COL11A2P13942 Y_RNA.407-201ENST00000383986 113 ntBASIC0.66□□□□□ -2.3
COL11A2P13942 MIR652-201ENST00000385278 98 ntBASIC0.66□□□□□ -2.3
COL11A2P13942 ACA64.5-201ENST00000516207 127 ntBASIC0.66□□□□□ -2.3
COL11A2P13942 MIR7107-201ENST00000611489 80 ntBASIC0.66□□□□□ -2.3
COL11A2P13942 MIR6755-201ENST00000619993 66 ntBASIC0.66□□□□□ -2.3
COL11A2P13942 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.66□□□□□ -2.3
COL11A2P13942 MIR140-201ENST00000385282 100 ntBASIC0.65□□□□□ -2.31
COL11A2P13942 CYP3A54P-201ENST00000566950 75 ntBASIC0.65□□□□□ -2.31
COL11A2P13942 RNU6-645P-201ENST00000364649 106 ntBASIC0.64□□□□□ -2.31
COL11A2P13942 Y_RNA.633-201ENST00000459107 95 ntBASIC0.64□□□□□ -2.31
COL11A2P13942 RNA5SP517-201ENST00000364724 117 ntBASIC0.64□□□□□ -2.31
COL11A2P13942 RNU1-29P-201ENST00000606574 126 ntBASIC0.64□□□□□ -2.31
COL11A2P13942 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
COL11A2P13942 MIR516B1-201ENST00000385211 90 ntBASIC0.63□□□□□ -2.31
COL11A2P13942 MIR4473-201ENST00000583731 91 ntBASIC0.63□□□□□ -2.31
COL11A2P13942 AC023932.2-201ENST00000603176 175 ntBASIC0.63□□□□□ -2.31
COL11A2P13942 SNORA70.25-201ENST00000612741 95 ntBASIC0.63□□□□□ -2.31
COL11A2P13942 RNU6-499P-201ENST00000365615 107 ntBASIC0.62□□□□□ -2.31
COL11A2P13942 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
COL11A2P13942 SNORA40.8-201ENST00000411034 126 ntBASIC0.62□□□□□ -2.31
COL11A2P13942 AL157398.1-201ENST00000452981 186 ntBASIC0.61□□□□□ -2.31
COL11A2P13942 SNORA25.18-201ENST00000607153 114 ntBASIC0.61□□□□□ -2.31
COL11A2P13942 RNA5SP192-201ENST00000364404 120 ntBASIC0.61□□□□□ -2.31
COL11A2P13942 RNY1P8-201ENST00000383970 114 ntBASIC0.61□□□□□ -2.31
COL11A2P13942 MIR630-201ENST00000384957 97 ntBASIC0.61□□□□□ -2.31
COL11A2P13942 PSMC1P5-201ENST00000512850 177 ntBASIC0.61□□□□□ -2.31
COL11A2P13942 RNU6-863P-201ENST00000515989 104 ntBASIC0.61□□□□□ -2.31
COL11A2P13942 SNORD114-29-201ENST00000364819 70 ntBASIC0.59□□□□□ -2.31
COL11A2P13942 MIR548E-201ENST00000408287 88 ntBASIC0.59□□□□□ -2.31
COL11A2P13942 MIR548AE1-201ENST00000583292 70 ntBASIC0.59□□□□□ -2.31
COL11A2P13942 MIR4653-201ENST00000585107 83 ntBASIC0.59□□□□□ -2.31
COL11A2P13942 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.58□□□□□ -2.32
COL11A2P13942 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms