Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
RARAP10276 MIR4661-201ENST00000582720 75 ntBASIC1.11□□□□□ -2.23
RARAP10276 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
RARAP10276 SNORA70.25-201ENST00000612741 95 ntBASIC1.11□□□□□ -2.23
RARAP10276 MIR8087-201ENST00000612745 78 ntBASIC1.11□□□□□ -2.23
RARAP10276 RNU6-1162P-201ENST00000384443 104 ntBASIC1.1□□□□□ -2.23
RARAP10276 snoU13.19-201ENST00000459148 104 ntBASIC1.1□□□□□ -2.23
RARAP10276 AC021146.9-201ENST00000512503 156 ntBASIC1.1□□□□□ -2.23
RARAP10276 MIR4752-201ENST00000579672 72 ntBASIC1.1□□□□□ -2.23
RARAP10276 AC103810.9-201ENST00000606688 112 ntBASIC1.1□□□□□ -2.23
RARAP10276 RNA5SP517-201ENST00000364724 117 ntBASIC1.09□□□□□ -2.23
RARAP10276 MIR521-2-201ENST00000384818 87 ntBASIC1.09□□□□□ -2.23
RARAP10276 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.08□□□□□ -2.24
RARAP10276 RNA5SP215-201ENST00000363440 122 ntBASIC1.08□□□□□ -2.24
RARAP10276 SNORA36.2-201ENST00000384004 127 ntBASIC1.08□□□□□ -2.24
RARAP10276 RNU6-1089P-201ENST00000516473 104 ntBASIC1.08□□□□□ -2.24
RARAP10276 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
RARAP10276 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.08□□□□□ -2.24
RARAP10276 MIR140-201ENST00000385282 100 ntBASIC1.07□□□□□ -2.24
RARAP10276 AL157398.1-201ENST00000452981 186 ntBASIC1.07□□□□□ -2.24
RARAP10276 RNU1-29P-201ENST00000606574 126 ntBASIC1.07□□□□□ -2.24
RARAP10276 AC092634.7-201ENST00000621022 103 ntBASIC1.07□□□□□ -2.24
RARAP10276 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
RARAP10276 SNORD114-23-201ENST00000363536 72 ntBASIC1.06□□□□□ -2.24
RARAP10276 SNORA63.6-201ENST00000364921 119 ntBASIC1.06□□□□□ -2.24
RARAP10276 MIR582-201ENST00000365731 98 ntBASIC1.06□□□□□ -2.24
RARAP10276 RNA5SP299-201ENST00000391203 116 ntBASIC1.06□□□□□ -2.24
RARAP10276 MIR548E-201ENST00000408287 88 ntBASIC1.06□□□□□ -2.24
RARAP10276 Y_RNA.633-201ENST00000459107 95 ntBASIC1.06□□□□□ -2.24
RARAP10276 AC087343.1-201ENST00000477341 475 ntBASIC1.06□□□□□ -2.24
RARAP10276 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
RARAP10276 AC010487.4-201ENST00000637027 61 ntBASIC1.05□□□□□ -2.24
RARAP10276 RNU4-38P-201ENST00000364472 129 ntBASIC1.04□□□□□ -2.24
RARAP10276 RNU6-499P-201ENST00000365615 107 ntBASIC1.04□□□□□ -2.24
RARAP10276 MIR608-201ENST00000384820 100 ntBASIC1.04□□□□□ -2.24
RARAP10276 HMGN2P22-201ENST00000427588 175 ntBASIC1.04□□□□□ -2.24
RARAP10276 AC069271.1-201ENST00000445577 156 ntBASIC1.04□□□□□ -2.24
RARAP10276 SCARNA21.1-201ENST00000515996 128 ntBASIC1.04□□□□□ -2.24
RARAP10276 ACA64.5-201ENST00000516207 127 ntBASIC1.04□□□□□ -2.24
RARAP10276 SNORA25.18-201ENST00000607153 114 ntBASIC1.04□□□□□ -2.24
RARAP10276 SNORA15B-2-201ENST00000384058 135 ntBASIC1.03□□□□□ -2.24
RARAP10276 SNORA15B-1-201ENST00000384334 135 ntBASIC1.03□□□□□ -2.24
RARAP10276 RNA5SP285-201ENST00000516619 119 ntBASIC1.03□□□□□ -2.24
RARAP10276 MIR5706-201ENST00000579841 80 ntBASIC1.03□□□□□ -2.24
RARAP10276 MIR4723-201ENST00000585070 81 ntBASIC1.03□□□□□ -2.24
RARAP10276 uc_338.10-201ENST00000621872 182 ntBASIC1.02□□□□□ -2.25
RARAP10276 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
RARAP10276 SNORA9.1-201ENST00000362412 131 ntBASIC1.01□□□□□ -2.25
RARAP10276 SNORA25.5-201ENST00000363782 126 ntBASIC1.01□□□□□ -2.25
RARAP10276 SNORA33.1-201ENST00000364957 130 ntBASIC1.01□□□□□ -2.25
RARAP10276 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
RARAP10276 MIR1197-201ENST00000408818 88 ntBASIC1.01□□□□□ -2.25
RARAP10276 SNORD118-201ENST00000363593 134 ntBASIC1□□□□□ -2.25
RARAP10276 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1□□□□□ -2.25
RARAP10276 MIR548V-201ENST00000584165 80 ntBASIC1□□□□□ -2.25
RARAP10276 RNA5SP192-201ENST00000364404 120 ntBASIC0.99□□□□□ -2.25
RARAP10276 RNU6-302P-201ENST00000365249 107 ntBASIC0.99□□□□□ -2.25
RARAP10276 MIR548C-201ENST00000384815 97 ntBASIC0.99□□□□□ -2.25
RARAP10276 SNORA40.8-201ENST00000411034 126 ntBASIC0.99□□□□□ -2.25
RARAP10276 MIR6767-201ENST00000637302 66 ntBASIC0.99□□□□□ -2.25
RARAP10276 Y_RNA.125-201ENST00000363371 111 ntBASIC0.98□□□□□ -2.25
RARAP10276 MIR4636-201ENST00000582271 80 ntBASIC0.98□□□□□ -2.25
RARAP10276 U2.7-201ENST00000619197 100 ntBASIC0.98□□□□□ -2.25
RARAP10276 MIR330-201ENST00000362196 94 ntBASIC0.96□□□□□ -2.26
RARAP10276 MIR633-201ENST00000384821 98 ntBASIC0.96□□□□□ -2.26
RARAP10276 MTND4LP19-201ENST00000403051 166 ntBASIC0.96□□□□□ -2.26
RARAP10276 RNU6-110P-201ENST00000384508 104 ntBASIC0.95□□□□□ -2.26
RARAP10276 RNU7-174P-201ENST00000516248 59 ntBASIC0.95□□□□□ -2.26
RARAP10276 RNU6-940P-201ENST00000363433 104 ntBASIC0.94□□□□□ -2.26
RARAP10276 SNORA2A-201ENST00000383885 135 ntBASIC0.94□□□□□ -2.26
RARAP10276 SNORD71-201ENST00000411292 86 ntBASIC0.94□□□□□ -2.26
RARAP10276 AC244090.1-201ENST00000441884 93 ntBASIC0.94□□□□□ -2.26
RARAP10276 AC211469.2-201ENST00000605461 205 ntBASIC0.94□□□□□ -2.26
RARAP10276 MIR20A-201ENST00000362279 71 ntBASIC0.93□□□□□ -2.26
RARAP10276 MIR630-201ENST00000384957 97 ntBASIC0.93□□□□□ -2.26
RARAP10276 MIR518A1-201ENST00000385068 85 ntBASIC0.93□□□□□ -2.26
RARAP10276 MIR517B-201ENST00000385102 67 ntBASIC0.93□□□□□ -2.26
RARAP10276 MIR1468-201ENST00000410600 86 ntBASIC0.93□□□□□ -2.26
RARAP10276 RNU4-54P-201ENST00000516428 129 ntBASIC0.93□□□□□ -2.26
RARAP10276 RNU6-229P-201ENST00000516614 102 ntBASIC0.93□□□□□ -2.26
RARAP10276 RNU6-92P-201ENST00000605893 104 ntBASIC0.93□□□□□ -2.26
RARAP10276 U7.6-201ENST00000610841 64 ntBASIC0.93□□□□□ -2.26
RARAP10276 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
RARAP10276 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
RARAP10276 Y_RNA.423-201ENST00000384057 113 ntBASIC0.92□□□□□ -2.26
RARAP10276 MIR532-201ENST00000385025 91 ntBASIC0.92□□□□□ -2.26
RARAP10276 MIR516B1-201ENST00000385211 90 ntBASIC0.92□□□□□ -2.26
RARAP10276 AC079150.2-201ENST00000443733 78 ntBASIC0.92□□□□□ -2.26
RARAP10276 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
RARAP10276 CYP3A137P-201ENST00000562436 69 ntBASIC0.92□□□□□ -2.26
RARAP10276 MIR466-201ENST00000580653 84 ntBASIC0.92□□□□□ -2.26
RARAP10276 RNU6-698P-201ENST00000363523 107 ntBASIC0.91□□□□□ -2.26
RARAP10276 RNU6-34P-201ENST00000364874 107 ntBASIC0.91□□□□□ -2.26
RARAP10276 RNU6-1232P-201ENST00000516299 86 ntBASIC0.91□□□□□ -2.26
RARAP10276 U6.96-201ENST00000636425 70 ntBASIC0.91□□□□□ -2.26
RARAP10276 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
RARAP10276 SNORA75.1-201ENST00000391130 148 ntBASIC0.9□□□□□ -2.27
RARAP10276 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
RARAP10276 RNU6-122P-201ENST00000516818 107 ntBASIC0.9□□□□□ -2.27
RARAP10276 MIR6755-201ENST00000619993 66 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 245 ms