Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 U6atac.1-201ENST00000616025 117 ntBASIC-2.7□□□□□ -2.84
CXCL1P09341 SNORD45B-201ENST00000364617 72 ntBASIC-2.71□□□□□ -2.84
CXCL1P09341 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.71□□□□□ -2.84
CXCL1P09341 MIR4756-201ENST00000577874 78 ntBASIC-2.71□□□□□ -2.84
CXCL1P09341 DLEU2_3.2-201ENST00000612883 73 ntBASIC-2.71□□□□□ -2.84
CXCL1P09341 MIR8062-201ENST00000621515 85 ntBASIC-2.71□□□□□ -2.84
CXCL1P09341 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.72□□□□□ -2.84
CXCL1P09341 RNU6-915P-201ENST00000364943 103 ntBASIC-2.72□□□□□ -2.84
CXCL1P09341 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.72□□□□□ -2.84
CXCL1P09341 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.72□□□□□ -2.84
CXCL1P09341 RNU6-875P-201ENST00000516488 106 ntBASIC-2.72□□□□□ -2.84
CXCL1P09341 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.73□□□□□ -2.85
CXCL1P09341 RNU7-197P-201ENST00000458836 62 ntBASIC-2.73□□□□□ -2.85
CXCL1P09341 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.74□□□□□ -2.85
CXCL1P09341 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.74□□□□□ -2.85
CXCL1P09341 MIR4795-201ENST00000584182 89 ntBASIC-2.74□□□□□ -2.85
CXCL1P09341 RNU6-608P-201ENST00000383927 104 ntBASIC-2.75□□□□□ -2.85
CXCL1P09341 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.75□□□□□ -2.85
CXCL1P09341 RNU6-696P-201ENST00000390834 107 ntBASIC-2.75□□□□□ -2.85
CXCL1P09341 MTND2P23-201ENST00000422990 651 ntBASIC-2.75□□□□□ -2.85
CXCL1P09341 RNU6-980P-201ENST00000516925 103 ntBASIC-2.75□□□□□ -2.85
CXCL1P09341 U2.7-201ENST00000619197 100 ntBASIC-2.75□□□□□ -2.85
CXCL1P09341 RNU6-841P-201ENST00000383872 107 ntBASIC-2.76□□□□□ -2.85
CXCL1P09341 RNU6-985P-201ENST00000410182 104 ntBASIC-2.76□□□□□ -2.85
CXCL1P09341 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.76□□□□□ -2.85
CXCL1P09341 MIR3613-201ENST00000579844 87 ntBASIC-2.76□□□□□ -2.85
CXCL1P09341 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.76□□□□□ -2.85
CXCL1P09341 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.77□□□□□ -2.85
CXCL1P09341 Y_RNA.419-201ENST00000384041 102 ntBASIC-2.78□□□□□ -2.85
CXCL1P09341 Y_RNA.512-201ENST00000384518 102 ntBASIC-2.78□□□□□ -2.85
CXCL1P09341 AL158147.1-201ENST00000443970 75 ntBASIC-2.78□□□□□ -2.85
CXCL1P09341 RNU6-781P-201ENST00000516377 101 ntBASIC-2.78□□□□□ -2.85
CXCL1P09341 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.78□□□□□ -2.85
CXCL1P09341 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.78□□□□□ -2.85
CXCL1P09341 RNU6-460P-201ENST00000391158 108 ntBASIC-2.79□□□□□ -2.86
CXCL1P09341 SNORD54-201ENST00000459159 67 ntBASIC-2.79□□□□□ -2.86
CXCL1P09341 RNU6-656P-201ENST00000516785 107 ntBASIC-2.79□□□□□ -2.86
CXCL1P09341 RNU6-458P-201ENST00000384179 107 ntBASIC-2.8□□□□□ -2.86
CXCL1P09341 Y_RNA.467-201ENST00000384297 102 ntBASIC-2.8□□□□□ -2.86
CXCL1P09341 RNU6-630P-201ENST00000391258 106 ntBASIC-2.8□□□□□ -2.86
CXCL1P09341 RNU6-1137P-201ENST00000517073 99 ntBASIC-2.8□□□□□ -2.86
CXCL1P09341 MIR4679-2-201ENST00000578358 77 ntBASIC-2.8□□□□□ -2.86
CXCL1P09341 U6.58-201ENST00000613107 107 ntBASIC-2.8□□□□□ -2.86
CXCL1P09341 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.81□□□□□ -2.86
CXCL1P09341 MIR3139-201ENST00000579145 76 ntBASIC-2.81□□□□□ -2.86
CXCL1P09341 AP001340.1-201ENST00000624405 217 ntBASIC-2.81□□□□□ -2.86
CXCL1P09341 Y_RNA.233-201ENST00000364407 101 ntBASIC-2.82□□□□□ -2.86
CXCL1P09341 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.82□□□□□ -2.86
CXCL1P09341 MIR3123-201ENST00000583417 75 ntBASIC-2.82□□□□□ -2.86
CXCL1P09341 AC134503.1-201ENST00000633048 54 ntBASIC-2.82□□□□□ -2.86
CXCL1P09341 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.83□□□□□ -2.86
CXCL1P09341 RNU6-1020P-201ENST00000363684 107 ntBASIC-2.83□□□□□ -2.86
CXCL1P09341 RNU4-11P-201ENST00000365287 132 ntBASIC-2.83□□□□□ -2.86
CXCL1P09341 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.83□□□□□ -2.86
CXCL1P09341 AC025166.1-201ENST00000612411 163 ntBASIC-2.83□□□□□ -2.86
CXCL1P09341 MIR429-201ENST00000362106 83 ntBASIC-2.84□□□□□ -2.86
CXCL1P09341 RNA5SP405-201ENST00000363059 114 ntBASIC-2.84□□□□□ -2.86
CXCL1P09341 MIR548A3-201ENST00000385297 97 ntBASIC-2.84□□□□□ -2.86
CXCL1P09341 RBMX2P4-201ENST00000441256 376 ntBASIC-2.84□□□□□ -2.86
CXCL1P09341 RNU4-71P-201ENST00000516258 113 ntBASIC-2.84□□□□□ -2.86
CXCL1P09341 MIR4796-201ENST00000580742 81 ntBASIC-2.84□□□□□ -2.86
CXCL1P09341 MIR548AM-201ENST00000584298 74 ntBASIC-2.84□□□□□ -2.86
CXCL1P09341 Y_RNA.20-201ENST00000362479 113 ntBASIC-2.85□□□□□ -2.87
CXCL1P09341 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.85□□□□□ -2.87
CXCL1P09341 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.85□□□□□ -2.87
CXCL1P09341 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.85□□□□□ -2.87
CXCL1P09341 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.86□□□□□ -2.87
CXCL1P09341 SNORA33.2-201ENST00000365413 134 ntBASIC-2.86□□□□□ -2.87
CXCL1P09341 MIR3144-201ENST00000579460 79 ntBASIC-2.86□□□□□ -2.87
CXCL1P09341 RNU6-681P-201ENST00000364012 104 ntBASIC-2.87□□□□□ -2.87
CXCL1P09341 MIR520D-201ENST00000385002 87 ntBASIC-2.87□□□□□ -2.87
CXCL1P09341 RNU6-635P-201ENST00000516651 102 ntBASIC-2.87□□□□□ -2.87
CXCL1P09341 MIR4777-201ENST00000583710 86 ntBASIC-2.87□□□□□ -2.87
CXCL1P09341 MT-TD-201ENST00000387419 68 ntBASIC-2.88□□□□□ -2.87
CXCL1P09341 SNORA81.3-201ENST00000517283 198 ntBASIC-2.88□□□□□ -2.87
CXCL1P09341 AC120024.2-201ENST00000576526 175 ntBASIC-2.88□□□□□ -2.87
CXCL1P09341 RNU6-194P-201ENST00000363862 105 ntBASIC-2.89□□□□□ -2.87
CXCL1P09341 RNU6-340P-201ENST00000364005 107 ntBASIC-2.89□□□□□ -2.87
CXCL1P09341 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.89□□□□□ -2.87
CXCL1P09341 MT-TM-201ENST00000387377 68 ntBASIC-2.89□□□□□ -2.87
CXCL1P09341 MTND4P29-201ENST00000503122 1372 ntBASIC-2.89□□□□□ -2.87
CXCL1P09341 SNORD58C-201ENST00000365223 64 ntBASIC-2.9□□□□□ -2.87
CXCL1P09341 AL450471.1-201ENST00000447509 127 ntBASIC-2.9□□□□□ -2.87
CXCL1P09341 AL035470.1-201ENST00000622571 220 ntBASIC-2.9□□□□□ -2.87
CXCL1P09341 Y_RNA.396-201ENST00000383949 103 ntBASIC-2.91□□□□□ -2.88
CXCL1P09341 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.91□□□□□ -2.88
CXCL1P09341 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.92□□□□□ -2.88
CXCL1P09341 RNU6-639P-201ENST00000384074 107 ntBASIC-2.92□□□□□ -2.88
CXCL1P09341 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.92□□□□□ -2.88
CXCL1P09341 AL035461.1-201ENST00000421490 332 ntBASIC-2.92□□□□□ -2.88
CXCL1P09341 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.92□□□□□ -2.88
CXCL1P09341 U7.2-201ENST00000607576 63 ntBASIC-2.92□□□□□ -2.88
CXCL1P09341 SNORD58A-201ENST00000383875 65 ntBASIC-2.93□□□□□ -2.88
CXCL1P09341 Y_RNA.478-201ENST00000384358 107 ntBASIC-2.93□□□□□ -2.88
CXCL1P09341 Y_RNA.216-201ENST00000364205 93 ntBASIC-2.94□□□□□ -2.88
CXCL1P09341 RNU6-645P-201ENST00000364649 106 ntBASIC-2.94□□□□□ -2.88
CXCL1P09341 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.94□□□□□ -2.88
CXCL1P09341 Y_RNA.574-201ENST00000384766 95 ntBASIC-2.94□□□□□ -2.88
CXCL1P09341 RNU6-972P-201ENST00000391208 107 ntBASIC-2.94□□□□□ -2.88
CXCL1P09341 MIR1236-201ENST00000408340 102 ntBASIC-2.94□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms