Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.03□□□□□ -2.4
HOXC4P09017 snoU13.13-201ENST00000458842 104 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 RNU7-171P-201ENST00000459581 62 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 AC006254.2-201ENST00000603259 279 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 MIR20A-201ENST00000362279 71 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 Y_RNA.219-201ENST00000364232 113 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 Y_RNA.316-201ENST00000365118 111 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 RNU6-1039P-201ENST00000383931 107 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 RNU6-573P-201ENST00000383938 106 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 RNU6-787P-201ENST00000384032 107 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 Y_RNA.426-201ENST00000384068 113 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 RNU6-929P-201ENST00000384429 107 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 RNU6-129P-201ENST00000391022 107 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 AC244090.1-201ENST00000441884 93 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 RNU6-330P-201ENST00000363015 107 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 SNORD114-4-201ENST00000363962 75 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 RNU6-1276P-201ENST00000365372 104 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 RNU6-820P-201ENST00000384273 107 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 RNY4P29-201ENST00000410801 97 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 RNU7-165P-201ENST00000458864 60 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 RNA5SP147-201ENST00000516493 109 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 RNU6-557P-201ENST00000516842 110 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 YWHAEP3-201ENST00000582767 121 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 AC145423.2-201ENST00000610631 239 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
HOXC4P09017 MIR6509-201ENST00000614603 85 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0□□□□□ -2.41
HOXC4P09017 MIRLET7A1-201ENST00000362295 80 ntBASIC0□□□□□ -2.41
HOXC4P09017 Y_RNA.313-201ENST00000365095 103 ntBASIC0□□□□□ -2.41
HOXC4P09017 RNU6-260P-201ENST00000384092 107 ntBASIC0□□□□□ -2.41
HOXC4P09017 RNU6-1152P-201ENST00000384576 107 ntBASIC0□□□□□ -2.41
HOXC4P09017 AL691482.2-201ENST00000457453 84 ntBASIC0□□□□□ -2.41
HOXC4P09017 RNU6-274P-201ENST00000459566 107 ntBASIC0□□□□□ -2.41
HOXC4P09017 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
HOXC4P09017 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
HOXC4P09017 MIR6507-201ENST00000613630 70 ntBASIC0□□□□□ -2.41
HOXC4P09017 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 RNU6-686P-201ENST00000364839 107 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 RNA5SP173-201ENST00000364857 136 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 SNORA26.2-201ENST00000390922 122 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 MIR892B-201ENST00000401279 77 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 RNU7-159P-201ENST00000459284 62 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 CR383656.4-201ENST00000546909 122 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 MIR4484-201ENST00000582855 83 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 MIR4743-201ENST00000584576 69 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 MIR3657-201ENST00000584818 117 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 RNA5SP257-201ENST00000363023 116 ntBASIC-0.02□□□□□ -2.41
HOXC4P09017 RNU6-242P-201ENST00000384359 107 ntBASIC-0.02□□□□□ -2.41
HOXC4P09017 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
HOXC4P09017 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.02□□□□□ -2.41
HOXC4P09017 MIR4666B-201ENST00000578142 81 ntBASIC-0.02□□□□□ -2.41
HOXC4P09017 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
HOXC4P09017 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.03□□□□□ -2.41
HOXC4P09017 AP000676.1-201ENST00000533307 52 ntBASIC-0.03□□□□□ -2.41
HOXC4P09017 MIR4712-201ENST00000583750 82 ntBASIC-0.03□□□□□ -2.41
HOXC4P09017 MIR1245B-201ENST00000636115 69 ntBASIC-0.03□□□□□ -2.41
HOXC4P09017 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.03□□□□□ -2.41
HOXC4P09017 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
HOXC4P09017 RNA5SP98-201ENST00000363158 137 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 SNORA63.6-201ENST00000364921 119 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 AC074348.1-201ENST00000426503 132 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 AC021146.9-201ENST00000512503 156 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 RNU6-303P-201ENST00000517091 106 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 AC090617.8-201ENST00000623339 167 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 MIR655-201ENST00000362159 97 ntBASIC-0.05□□□□□ -2.42
HOXC4P09017 SNORA2.1-201ENST00000363089 137 ntBASIC-0.05□□□□□ -2.42
HOXC4P09017 RNU6-681P-201ENST00000364012 104 ntBASIC-0.05□□□□□ -2.42
HOXC4P09017 AC244250.2-201ENST00000418731 148 ntBASIC-0.05□□□□□ -2.42
HOXC4P09017 SCARNA18B-201ENST00000458806 135 ntBASIC-0.05□□□□□ -2.42
HOXC4P09017 MIR664A-201ENST00000626086 82 ntBASIC-0.05□□□□□ -2.42
HOXC4P09017 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.05□□□□□ -2.42
HOXC4P09017 MIR148A-201ENST00000362215 68 ntBASIC-0.06□□□□□ -2.42
HOXC4P09017 RNU6-502P-201ENST00000362419 108 ntBASIC-0.06□□□□□ -2.42
HOXC4P09017 SNORD115-25-201ENST00000362619 82 ntBASIC-0.06□□□□□ -2.42
HOXC4P09017 RNU6-315P-201ENST00000362666 107 ntBASIC-0.06□□□□□ -2.42
HOXC4P09017 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
HOXC4P09017 RNU6-337P-201ENST00000391243 106 ntBASIC-0.06□□□□□ -2.42
HOXC4P09017 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.06□□□□□ -2.42
HOXC4P09017 RNU6-228P-201ENST00000362700 106 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 SNORA33.1-201ENST00000364957 130 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 SNORA8.1-201ENST00000384250 140 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 MIR9-2-201ENST00000384838 87 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 RNU6-752P-201ENST00000516376 102 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 MIR3675-201ENST00000583661 73 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.08□□□□□ -2.42
HOXC4P09017 RNU6-455P-201ENST00000384681 107 ntBASIC-0.08□□□□□ -2.42
HOXC4P09017 MIR6773-201ENST00000612812 74 ntBASIC-0.08□□□□□ -2.42
HOXC4P09017 MIR1255A-201ENST00000408338 113 ntBASIC-0.09□□□□□ -2.42
HOXC4P09017 MIR1302-4-201ENST00000408701 150 ntBASIC-0.09□□□□□ -2.42
HOXC4P09017 U6.96-201ENST00000636425 70 ntBASIC-0.09□□□□□ -2.42
HOXC4P09017 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.1□□□□□ -2.43
HOXC4P09017 SNORD49B-201ENST00000365172 72 ntBASIC-0.1□□□□□ -2.43
HOXC4P09017 SNORD114-12-201ENST00000365400 75 ntBASIC-0.1□□□□□ -2.43
HOXC4P09017 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.1□□□□□ -2.43
HOXC4P09017 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms