Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.12□□□□□ -2.23
KRT1P04264 MIR4661-201ENST00000582720 75 ntBASIC1.12□□□□□ -2.23
KRT1P04264 MIR19B1-201ENST00000384829 87 ntBASIC1.11□□□□□ -2.23
KRT1P04264 AC006210.1-201ENST00000424882 111 ntBASIC1.11□□□□□ -2.23
KRT1P04264 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.11□□□□□ -2.23
KRT1P04264 RNA5SP227-201ENST00000516184 113 ntBASIC1.11□□□□□ -2.23
KRT1P04264 MIR548AD-201ENST00000584780 82 ntBASIC1.11□□□□□ -2.23
KRT1P04264 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.11□□□□□ -2.23
KRT1P04264 Y_RNA.30-201ENST00000362572 97 ntBASIC1.1□□□□□ -2.23
KRT1P04264 SNORD110-201ENST00000408189 75 ntBASIC1.1□□□□□ -2.23
KRT1P04264 RNU6-753P-201ENST00000363926 107 ntBASIC1.09□□□□□ -2.23
KRT1P04264 RNU1-93P-201ENST00000364704 169 ntBASIC1.09□□□□□ -2.23
KRT1P04264 Y_RNA.325-201ENST00000365171 122 ntBASIC1.09□□□□□ -2.23
KRT1P04264 SNORA41B-201ENST00000384785 128 ntBASIC1.09□□□□□ -2.23
KRT1P04264 AL021921.1-201ENST00000442774 93 ntBASIC1.09□□□□□ -2.23
KRT1P04264 RNU6-1223P-201ENST00000517124 104 ntBASIC1.09□□□□□ -2.23
KRT1P04264 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
KRT1P04264 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRT1P04264 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
KRT1P04264 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRT1P04264 MIR548E-201ENST00000408287 88 ntBASIC1.08□□□□□ -2.24
KRT1P04264 RNU6-231P-201ENST00000517122 103 ntBASIC1.08□□□□□ -2.24
KRT1P04264 CYP3A54P-201ENST00000566950 75 ntBASIC1.08□□□□□ -2.24
KRT1P04264 MIR4473-201ENST00000583731 91 ntBASIC1.08□□□□□ -2.24
KRT1P04264 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
KRT1P04264 U6.96-201ENST00000636425 70 ntBASIC1.08□□□□□ -2.24
KRT1P04264 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
KRT1P04264 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRT1P04264 RNU4-45P-201ENST00000365469 141 ntBASIC1.07□□□□□ -2.24
KRT1P04264 MIR582-201ENST00000365731 98 ntBASIC1.07□□□□□ -2.24
KRT1P04264 MIR520E-201ENST00000384867 87 ntBASIC1.07□□□□□ -2.24
KRT1P04264 MIR548AE1-201ENST00000583292 70 ntBASIC1.07□□□□□ -2.24
KRT1P04264 SNORA9.1-201ENST00000362412 131 ntBASIC1.06□□□□□ -2.24
KRT1P04264 SNORD114-24-201ENST00000365029 72 ntBASIC1.06□□□□□ -2.24
KRT1P04264 RPS29P1-201ENST00000465274 159 ntBASIC1.06□□□□□ -2.24
KRT1P04264 RNA5SP268-201ENST00000516828 124 ntBASIC1.06□□□□□ -2.24
KRT1P04264 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.06□□□□□ -2.24
KRT1P04264 Y_RNA.74-201ENST00000362911 99 ntBASIC1.05□□□□□ -2.24
KRT1P04264 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
KRT1P04264 SNORD124-201ENST00000459577 104 ntBASIC1.05□□□□□ -2.24
KRT1P04264 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
KRT1P04264 MIR151B-201ENST00000584249 96 ntBASIC1.05□□□□□ -2.24
KRT1P04264 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.05□□□□□ -2.24
KRT1P04264 MIR6788-201ENST00000618842 66 ntBASIC1.05□□□□□ -2.24
KRT1P04264 MIR18A-201ENST00000362310 71 ntBASIC1.04□□□□□ -2.24
KRT1P04264 SNORD116-16-201ENST00000384533 92 ntBASIC1.04□□□□□ -2.24
KRT1P04264 MIR516B1-201ENST00000385211 90 ntBASIC1.04□□□□□ -2.24
KRT1P04264 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.04□□□□□ -2.24
KRT1P04264 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.04□□□□□ -2.24
KRT1P04264 RNU6-980P-201ENST00000516925 103 ntBASIC1.04□□□□□ -2.24
KRT1P04264 AC243829.6-201ENST00000612652 106 ntBASIC1.04□□□□□ -2.24
KRT1P04264 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRT1P04264 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.03□□□□□ -2.24
KRT1P04264 SNORA36.1-201ENST00000363424 132 ntBASIC1.03□□□□□ -2.24
KRT1P04264 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
KRT1P04264 SNORD2-201ENST00000459163 69 ntBASIC1.03□□□□□ -2.24
KRT1P04264 RNU6-518P-201ENST00000516056 96 ntBASIC1.03□□□□□ -2.24
KRT1P04264 MIR20A-201ENST00000362279 71 ntBASIC1.02□□□□□ -2.25
KRT1P04264 Y_RNA.68-201ENST00000362881 102 ntBASIC1.02□□□□□ -2.25
KRT1P04264 SNORD116.2-201ENST00000391251 93 ntBASIC1.02□□□□□ -2.25
KRT1P04264 MIR548J-201ENST00000408833 112 ntBASIC1.02□□□□□ -2.25
KRT1P04264 AC244090.1-201ENST00000441884 93 ntBASIC1.02□□□□□ -2.25
KRT1P04264 HAR1A.1-201ENST00000459583 118 ntBASIC1.02□□□□□ -2.25
KRT1P04264 RNA5SP255-201ENST00000516370 107 ntBASIC1.02□□□□□ -2.25
KRT1P04264 AC011195.1-201ENST00000578177 177 ntBASIC1.02□□□□□ -2.25
KRT1P04264 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
KRT1P04264 MIR7110-201ENST00000612638 86 ntBASIC1.02□□□□□ -2.25
KRT1P04264 RNU4-33P-201ENST00000364316 85 ntBASIC1.01□□□□□ -2.25
KRT1P04264 MIR527-201ENST00000385244 85 ntBASIC1.01□□□□□ -2.25
KRT1P04264 RNU6-1246P-201ENST00000391064 107 ntBASIC1.01□□□□□ -2.25
KRT1P04264 RNA5SP94-201ENST00000516917 108 ntBASIC1.01□□□□□ -2.25
KRT1P04264 MIR7107-201ENST00000611489 80 ntBASIC1.01□□□□□ -2.25
KRT1P04264 SNORD99-201ENST00000408612 74 ntBASIC1□□□□□ -2.25
KRT1P04264 RNA5SP476-201ENST00000516613 103 ntBASIC1□□□□□ -2.25
KRT1P04264 MIR5706-201ENST00000579841 80 ntBASIC1□□□□□ -2.25
KRT1P04264 SNORD114-27-201ENST00000363766 70 ntBASIC0.99□□□□□ -2.25
KRT1P04264 Y_RNA.282-201ENST00000364793 102 ntBASIC0.99□□□□□ -2.25
KRT1P04264 MIR1255B2-201ENST00000408618 67 ntBASIC0.99□□□□□ -2.25
KRT1P04264 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.99□□□□□ -2.25
KRT1P04264 RNA5SP436-201ENST00000516020 115 ntBASIC0.99□□□□□ -2.25
KRT1P04264 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.99□□□□□ -2.25
KRT1P04264 AC243829.3-201ENST00000622177 108 ntBASIC0.99□□□□□ -2.25
KRT1P04264 Y_RNA.433-201ENST00000384089 102 ntBASIC0.98□□□□□ -2.25
KRT1P04264 MIR519A2-201ENST00000384990 87 ntBASIC0.98□□□□□ -2.25
KRT1P04264 SNORA40.16-201ENST00000517238 121 ntBASIC0.98□□□□□ -2.25
KRT1P04264 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
KRT1P04264 SNORA70.25-201ENST00000612741 95 ntBASIC0.98□□□□□ -2.25
KRT1P04264 RNU6-246P-201ENST00000384702 107 ntBASIC0.97□□□□□ -2.25
KRT1P04264 MIR548X-201ENST00000580069 75 ntBASIC0.97□□□□□ -2.25
KRT1P04264 RN7SL793P-201ENST00000583259 296 ntBASIC0.97□□□□□ -2.25
KRT1P04264 AC090617.8-201ENST00000623339 167 ntBASIC0.97□□□□□ -2.25
KRT1P04264 MIR6767-201ENST00000637302 66 ntBASIC0.97□□□□□ -2.25
KRT1P04264 RNU6-35P-201ENST00000384530 107 ntBASIC0.96□□□□□ -2.26
KRT1P04264 SNORA40B-201ENST00000385573 128 ntBASIC0.96□□□□□ -2.26
KRT1P04264 RNU6-930P-201ENST00000390938 100 ntBASIC0.96□□□□□ -2.26
KRT1P04264 HMGN2P22-201ENST00000427588 175 ntBASIC0.96□□□□□ -2.26
KRT1P04264 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
KRT1P04264 MIR429-201ENST00000362106 83 ntBASIC0.95□□□□□ -2.26
KRT1P04264 SNORD114-29-201ENST00000364819 70 ntBASIC0.95□□□□□ -2.26
KRT1P04264 RNU7-154P-201ENST00000516194 62 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 316.5 ms