Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC025627.3-201ENST00000582078 182 ntBASIC0.56□□□□□ -2.32
COL2A1P02458 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
COL2A1P02458 RNU6-260P-201ENST00000384092 107 ntBASIC0.55□□□□□ -2.32
COL2A1P02458 SNORD41.1-201ENST00000391000 69 ntBASIC0.55□□□□□ -2.32
COL2A1P02458 AC093423.1-201ENST00000440817 142 ntBASIC0.55□□□□□ -2.32
COL2A1P02458 RNU6-871P-201ENST00000516122 100 ntBASIC0.55□□□□□ -2.32
COL2A1P02458 RNA5SP268-201ENST00000516828 124 ntBASIC0.55□□□□□ -2.32
COL2A1P02458 SNORA25.18-201ENST00000607153 114 ntBASIC0.55□□□□□ -2.32
COL2A1P02458 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
COL2A1P02458 MIR9-2-201ENST00000384838 87 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 MIR329-2-201ENST00000385029 84 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 SNORD75.2-201ENST00000408784 58 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 RNA5SP25-201ENST00000410815 110 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 RNU6-1232P-201ENST00000516299 86 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 RNU4-54P-201ENST00000516428 129 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 RNA5SP94-201ENST00000516917 108 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 MIR548AE1-201ENST00000583292 70 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 MIR3657-201ENST00000584818 117 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.54□□□□□ -2.32
COL2A1P02458 SNORA70.25-201ENST00000612741 95 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 RNU1-124P-201ENST00000363861 145 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 RNU6-800P-201ENST00000384473 103 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 SNORD116-24-201ENST00000384549 92 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 MIR652-201ENST00000385278 98 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 MT-TY-201ENST00000387409 66 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 SCARNA16.5-201ENST00000517114 183 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 SNORA40.17-201ENST00000517256 115 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 MIR7107-201ENST00000611489 80 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 U6.111-201ENST00000636093 83 ntBASIC0.54□□□□□ -2.32
COL2A1P02458 RNA5SP517-201ENST00000364724 117 ntBASIC0.53□□□□□ -2.33
COL2A1P02458 Y_RNA.386-201ENST00000383913 105 ntBASIC0.53□□□□□ -2.33
COL2A1P02458 Y_RNA.423-201ENST00000384057 113 ntBASIC0.53□□□□□ -2.33
COL2A1P02458 MIR548C-201ENST00000384815 97 ntBASIC0.53□□□□□ -2.33
COL2A1P02458 RNA5SP299-201ENST00000391203 116 ntBASIC0.53□□□□□ -2.33
COL2A1P02458 SNORD110-201ENST00000408189 75 ntBASIC0.53□□□□□ -2.33
COL2A1P02458 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.33
COL2A1P02458 MIR5589-201ENST00000579442 60 ntBASIC0.53□□□□□ -2.33
COL2A1P02458 MIR4661-201ENST00000582720 75 ntBASIC0.53□□□□□ -2.33
COL2A1P02458 AL353765.1-201ENST00000605514 183 ntBASIC0.53□□□□□ -2.33
COL2A1P02458 RNU6-1216P-201ENST00000362590 107 ntBASIC0.52□□□□□ -2.33
COL2A1P02458 RNA5SP331-201ENST00000364986 107 ntBASIC0.52□□□□□ -2.33
COL2A1P02458 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
COL2A1P02458 AC125388.1-201ENST00000459631 156 ntBASIC0.52□□□□□ -2.33
COL2A1P02458 AC005520.4-201ENST00000604337 90 ntBASIC0.52□□□□□ -2.33
COL2A1P02458 RNU6-539P-201ENST00000516665 103 ntBASIC0.51□□□□□ -2.33
COL2A1P02458 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.51□□□□□ -2.33
COL2A1P02458 MIR4802-201ENST00000581881 80 ntBASIC0.51□□□□□ -2.33
COL2A1P02458 SNORA8.2-201ENST00000384372 139 ntBASIC0.5□□□□□ -2.33
COL2A1P02458 AC006210.1-201ENST00000424882 111 ntBASIC0.5□□□□□ -2.33
COL2A1P02458 RNU7-74P-201ENST00000459104 62 ntBASIC0.5□□□□□ -2.33
COL2A1P02458 PSMC1P5-201ENST00000512850 177 ntBASIC0.5□□□□□ -2.33
COL2A1P02458 MIR548V-201ENST00000584165 80 ntBASIC0.5□□□□□ -2.33
COL2A1P02458 AL162376.1-201ENST00000624117 175 ntBASIC0.5□□□□□ -2.33
COL2A1P02458 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.49□□□□□ -2.33
COL2A1P02458 RNU6-645P-201ENST00000364649 106 ntBASIC0.49□□□□□ -2.33
COL2A1P02458 MIR608-201ENST00000384820 100 ntBASIC0.49□□□□□ -2.33
COL2A1P02458 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.49□□□□□ -2.33
COL2A1P02458 RNU6-135P-201ENST00000516769 101 ntBASIC0.49□□□□□ -2.33
COL2A1P02458 MIR8053-201ENST00000613344 75 ntBASIC0.49□□□□□ -2.33
COL2A1P02458 MIR6718-201ENST00000616153 80 ntBASIC0.49□□□□□ -2.33
COL2A1P02458 MIR6828-201ENST00000636181 60 ntBASIC0.49□□□□□ -2.33
COL2A1P02458 RNU6-668P-201ENST00000364180 107 ntBASIC0.48□□□□□ -2.33
COL2A1P02458 MIR582-201ENST00000365731 98 ntBASIC0.48□□□□□ -2.33
COL2A1P02458 RNU7-24P-201ENST00000458867 62 ntBASIC0.48□□□□□ -2.33
COL2A1P02458 snoU13.19-201ENST00000459148 104 ntBASIC0.48□□□□□ -2.33
COL2A1P02458 Y_RNA.443-201ENST00000384135 111 ntBASIC0.48□□□□□ -2.33
COL2A1P02458 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
COL2A1P02458 MIR216B-201ENST00000390186 82 ntBASIC0.48□□□□□ -2.33
COL2A1P02458 RNU6-656P-201ENST00000516785 107 ntBASIC0.48□□□□□ -2.33
COL2A1P02458 AC069503.3-201ENST00000618674 145 ntBASIC0.48□□□□□ -2.33
COL2A1P02458 AC092634.7-201ENST00000621022 103 ntBASIC0.48□□□□□ -2.33
COL2A1P02458 RNU6-590P-201ENST00000365039 107 ntBASIC0.47□□□□□ -2.33
COL2A1P02458 MIR140-201ENST00000385282 100 ntBASIC0.47□□□□□ -2.33
COL2A1P02458 HMGN2P22-201ENST00000427588 175 ntBASIC0.47□□□□□ -2.33
COL2A1P02458 uc_338.10-201ENST00000621872 182 ntBASIC0.47□□□□□ -2.33
COL2A1P02458 SNORA33.1-201ENST00000364957 130 ntBASIC0.46□□□□□ -2.34
COL2A1P02458 MIR630-201ENST00000384957 97 ntBASIC0.46□□□□□ -2.34
COL2A1P02458 Z95118.1-201ENST00000421372 247 ntBASIC0.46□□□□□ -2.34
COL2A1P02458 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
COL2A1P02458 RNU6-752P-201ENST00000516376 102 ntBASIC0.46□□□□□ -2.34
COL2A1P02458 RNU1-29P-201ENST00000606574 126 ntBASIC0.46□□□□□ -2.34
COL2A1P02458 MIR499B-201ENST00000636498 73 ntBASIC0.46□□□□□ -2.34
COL2A1P02458 Y_RNA.407-201ENST00000383986 113 ntBASIC0.45□□□□□ -2.34
COL2A1P02458 MIR516B1-201ENST00000385211 90 ntBASIC0.45□□□□□ -2.34
COL2A1P02458 AC090617.8-201ENST00000623339 167 ntBASIC0.45□□□□□ -2.34
COL2A1P02458 MTND4LP1-201ENST00000446263 157 ntBASIC0.44□□□□□ -2.34
COL2A1P02458 AC021146.9-201ENST00000512503 156 ntBASIC0.44□□□□□ -2.34
COL2A1P02458 SCARNA17.3-201ENST00000516381 125 ntBASIC0.44□□□□□ -2.34
COL2A1P02458 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
COL2A1P02458 MIR548E-201ENST00000408287 88 ntBASIC0.43□□□□□ -2.34
COL2A1P02458 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.43□□□□□ -2.34
COL2A1P02458 RNU7-129P-201ENST00000516128 62 ntBASIC0.43□□□□□ -2.34
COL2A1P02458 MIR6755-201ENST00000619993 66 ntBASIC0.43□□□□□ -2.34
COL2A1P02458 AC073869.9-201ENST00000641610 120 ntBASIC0.43□□□□□ -2.34
COL2A1P02458 SNORA2.1-201ENST00000363089 137 ntBASIC0.42□□□□□ -2.34
COL2A1P02458 SNORD118-201ENST00000363593 134 ntBASIC0.42□□□□□ -2.34
COL2A1P02458 SNORD114-4-201ENST00000363962 75 ntBASIC0.42□□□□□ -2.34
COL2A1P02458 SNORA2A-201ENST00000383885 135 ntBASIC0.42□□□□□ -2.34
COL2A1P02458 SNORA40.8-201ENST00000411034 126 ntBASIC0.42□□□□□ -2.34
COL2A1P02458 RNU6-1089P-201ENST00000516473 104 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 219.9 ms