Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 MIR203A-201ENST00000384836 110 ntBASIC0.75□□□□□ -2.29
UPK3BL1B0FP48 MIR652-201ENST00000385278 98 ntBASIC0.75□□□□□ -2.29
UPK3BL1B0FP48 MIR4711-201ENST00000578274 70 ntBASIC0.75□□□□□ -2.29
UPK3BL1B0FP48 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
UPK3BL1B0FP48 Y_RNA.125-201ENST00000363371 111 ntBASIC0.74□□□□□ -2.29
UPK3BL1B0FP48 RNU6-945P-201ENST00000383947 107 ntBASIC0.74□□□□□ -2.29
UPK3BL1B0FP48 RNU6-540P-201ENST00000384622 101 ntBASIC0.74□□□□□ -2.29
UPK3BL1B0FP48 RNA5SP193-201ENST00000410353 107 ntBASIC0.74□□□□□ -2.29
UPK3BL1B0FP48 HMGN2P22-201ENST00000427588 175 ntBASIC0.74□□□□□ -2.29
UPK3BL1B0FP48 RNA5SP121-201ENST00000516537 101 ntBASIC0.74□□□□□ -2.29
UPK3BL1B0FP48 RNU6-539P-201ENST00000516665 103 ntBASIC0.74□□□□□ -2.29
UPK3BL1B0FP48 AL109933.3-201ENST00000619095 188 ntBASIC0.74□□□□□ -2.29
UPK3BL1B0FP48 MIR330-201ENST00000362196 94 ntBASIC0.73□□□□□ -2.29
UPK3BL1B0FP48 SNORD113.1-201ENST00000363280 73 ntBASIC0.73□□□□□ -2.29
UPK3BL1B0FP48 MIR508-201ENST00000384857 115 ntBASIC0.73□□□□□ -2.29
UPK3BL1B0FP48 RNU6-604P-201ENST00000390917 100 ntBASIC0.73□□□□□ -2.29
UPK3BL1B0FP48 RNU6-229P-201ENST00000516614 102 ntBASIC0.73□□□□□ -2.29
UPK3BL1B0FP48 MIR4473-201ENST00000583731 91 ntBASIC0.73□□□□□ -2.29
UPK3BL1B0FP48 RNA5SP347-201ENST00000362445 119 ntBASIC0.72□□□□□ -2.29
UPK3BL1B0FP48 Y_RNA.433-201ENST00000384089 102 ntBASIC0.72□□□□□ -2.29
UPK3BL1B0FP48 RNU6-895P-201ENST00000384125 103 ntBASIC0.72□□□□□ -2.29
UPK3BL1B0FP48 RNU6-649P-201ENST00000384463 107 ntBASIC0.72□□□□□ -2.29
UPK3BL1B0FP48 SNORD45A-201ENST00000384512 84 ntBASIC0.72□□□□□ -2.29
UPK3BL1B0FP48 RNU4-54P-201ENST00000516428 129 ntBASIC0.72□□□□□ -2.29
UPK3BL1B0FP48 RNU6-881P-201ENST00000516813 102 ntBASIC0.72□□□□□ -2.29
UPK3BL1B0FP48 SNORA40.17-201ENST00000517256 115 ntBASIC0.72□□□□□ -2.29
UPK3BL1B0FP48 MIR548AE1-201ENST00000583292 70 ntBASIC0.72□□□□□ -2.29
UPK3BL1B0FP48 MIR6739-201ENST00000622461 75 ntBASIC0.72□□□□□ -2.29
UPK3BL1B0FP48 RNU6-990P-201ENST00000364385 104 ntBASIC0.71□□□□□ -2.3
UPK3BL1B0FP48 MIR8087-201ENST00000612745 78 ntBASIC0.71□□□□□ -2.3
UPK3BL1B0FP48 RNU6-1216P-201ENST00000362590 107 ntBASIC0.7□□□□□ -2.3
UPK3BL1B0FP48 Y_RNA.423-201ENST00000384057 113 ntBASIC0.7□□□□□ -2.3
UPK3BL1B0FP48 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
UPK3BL1B0FP48 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
UPK3BL1B0FP48 MIR6755-201ENST00000619993 66 ntBASIC0.7□□□□□ -2.3
UPK3BL1B0FP48 RNA5SP257-201ENST00000363023 116 ntBASIC0.69□□□□□ -2.3
UPK3BL1B0FP48 SNORD30.1-201ENST00000391309 70 ntBASIC0.69□□□□□ -2.3
UPK3BL1B0FP48 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
UPK3BL1B0FP48 SNORD44.1-201ENST00000363202 61 ntBASIC0.68□□□□□ -2.3
UPK3BL1B0FP48 RNU6-590P-201ENST00000365039 107 ntBASIC0.68□□□□□ -2.3
UPK3BL1B0FP48 RNU6-663P-201ENST00000391105 106 ntBASIC0.68□□□□□ -2.3
UPK3BL1B0FP48 AC244090.1-201ENST00000441884 93 ntBASIC0.67□□□□□ -2.3
UPK3BL1B0FP48 MIR20A-201ENST00000362279 71 ntBASIC0.66□□□□□ -2.3
UPK3BL1B0FP48 SNORA15B-2-201ENST00000384058 135 ntBASIC0.66□□□□□ -2.3
UPK3BL1B0FP48 SNORA15B-1-201ENST00000384334 135 ntBASIC0.66□□□□□ -2.3
UPK3BL1B0FP48 MTND4LP1-201ENST00000446263 157 ntBASIC0.66□□□□□ -2.3
UPK3BL1B0FP48 Y_RNA.633-201ENST00000459107 95 ntBASIC0.66□□□□□ -2.3
UPK3BL1B0FP48 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.66□□□□□ -2.3
UPK3BL1B0FP48 RNU6-1162P-201ENST00000384443 104 ntBASIC0.65□□□□□ -2.31
UPK3BL1B0FP48 MIR548AD-201ENST00000584780 82 ntBASIC0.65□□□□□ -2.31
UPK3BL1B0FP48 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.65□□□□□ -2.31
UPK3BL1B0FP48 U6.111-201ENST00000636093 83 ntBASIC0.65□□□□□ -2.31
UPK3BL1B0FP48 SNORA63.6-201ENST00000364921 119 ntBASIC0.64□□□□□ -2.31
UPK3BL1B0FP48 SNORD116-24-201ENST00000384549 92 ntBASIC0.64□□□□□ -2.31
UPK3BL1B0FP48 MIR521-2-201ENST00000384818 87 ntBASIC0.64□□□□□ -2.31
UPK3BL1B0FP48 RNU6-788P-201ENST00000390967 104 ntBASIC0.64□□□□□ -2.31
UPK3BL1B0FP48 SNORD2-201ENST00000459163 69 ntBASIC0.64□□□□□ -2.31
UPK3BL1B0FP48 RNU6-1232P-201ENST00000516299 86 ntBASIC0.64□□□□□ -2.31
UPK3BL1B0FP48 RNA5SP147-201ENST00000516493 109 ntBASIC0.64□□□□□ -2.31
UPK3BL1B0FP48 MIR4677-201ENST00000584153 80 ntBASIC0.64□□□□□ -2.31
UPK3BL1B0FP48 RNU6-645P-201ENST00000364649 106 ntBASIC0.63□□□□□ -2.31
UPK3BL1B0FP48 SNORD114-29-201ENST00000364819 70 ntBASIC0.63□□□□□ -2.31
UPK3BL1B0FP48 RNA5SP128-201ENST00000365305 116 ntBASIC0.63□□□□□ -2.31
UPK3BL1B0FP48 MIR760-201ENST00000390220 80 ntBASIC0.63□□□□□ -2.31
UPK3BL1B0FP48 MIR548E-201ENST00000408287 88 ntBASIC0.63□□□□□ -2.31
UPK3BL1B0FP48 RNU6-982P-201ENST00000516216 102 ntBASIC0.63□□□□□ -2.31
UPK3BL1B0FP48 AC243829.3-201ENST00000622177 108 ntBASIC0.63□□□□□ -2.31
UPK3BL1B0FP48 MIR516B1-201ENST00000385211 90 ntBASIC0.62□□□□□ -2.31
UPK3BL1B0FP48 MIR501-201ENST00000390204 84 ntBASIC0.62□□□□□ -2.31
UPK3BL1B0FP48 AC021146.9-201ENST00000512503 156 ntBASIC0.62□□□□□ -2.31
UPK3BL1B0FP48 RNU6-656P-201ENST00000516785 107 ntBASIC0.61□□□□□ -2.31
UPK3BL1B0FP48 RNU6-668P-201ENST00000364180 107 ntBASIC0.6□□□□□ -2.31
UPK3BL1B0FP48 MIR582-201ENST00000365731 98 ntBASIC0.6□□□□□ -2.31
UPK3BL1B0FP48 RNU6-800P-201ENST00000384473 103 ntBASIC0.6□□□□□ -2.31
UPK3BL1B0FP48 RNU6-630P-201ENST00000391258 106 ntBASIC0.59□□□□□ -2.31
UPK3BL1B0FP48 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.59□□□□□ -2.31
UPK3BL1B0FP48 Y_RNA.443-201ENST00000384135 111 ntBASIC0.58□□□□□ -2.32
UPK3BL1B0FP48 SNORA68.3-201ENST00000515906 83 ntBASIC0.58□□□□□ -2.32
UPK3BL1B0FP48 AC084368.1-201ENST00000620935 65 ntBASIC0.58□□□□□ -2.32
UPK3BL1B0FP48 MIR5087-201ENST00000635826 76 ntBASIC0.58□□□□□ -2.32
UPK3BL1B0FP48 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
UPK3BL1B0FP48 MIRLET7D-201ENST00000362263 87 ntBASIC0.57□□□□□ -2.32
UPK3BL1B0FP48 SNORA25.4-201ENST00000363666 124 ntBASIC0.57□□□□□ -2.32
UPK3BL1B0FP48 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
UPK3BL1B0FP48 MIR1197-201ENST00000408818 88 ntBASIC0.57□□□□□ -2.32
UPK3BL1B0FP48 snoU13.13-201ENST00000458842 104 ntBASIC0.57□□□□□ -2.32
UPK3BL1B0FP48 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.57□□□□□ -2.32
UPK3BL1B0FP48 AC090625.1-201ENST00000357130 210 ntBASIC0.56□□□□□ -2.32
UPK3BL1B0FP48 Y_RNA.386-201ENST00000383913 105 ntBASIC0.56□□□□□ -2.32
UPK3BL1B0FP48 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
UPK3BL1B0FP48 RNU7-188P-201ENST00000517063 64 ntBASIC0.56□□□□□ -2.32
UPK3BL1B0FP48 AC005520.4-201ENST00000604337 90 ntBASIC0.56□□□□□ -2.32
UPK3BL1B0FP48 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.55□□□□□ -2.32
UPK3BL1B0FP48 SNORA9.1-201ENST00000362412 131 ntBASIC0.55□□□□□ -2.32
UPK3BL1B0FP48 RNA5SP215-201ENST00000363440 122 ntBASIC0.55□□□□□ -2.32
UPK3BL1B0FP48 MIR103A1-201ENST00000362165 78 ntBASIC0.54□□□□□ -2.32
UPK3BL1B0FP48 MIR876-201ENST00000401147 81 ntBASIC0.54□□□□□ -2.32
UPK3BL1B0FP48 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
UPK3BL1B0FP48 MIR3925-201ENST00000584674 77 ntBASIC0.54□□□□□ -2.32
UPK3BL1B0FP48 AC243829.6-201ENST00000612652 106 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms