Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.47□□□□□ -2.33
TMEM238LA0A1B0GVL6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.47□□□□□ -2.33
TMEM238LA0A1B0GVL6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.46□□□□□ -2.34
TMEM238LA0A1B0GVL6 AL591806.2-201ENST00000433122 173 ntBASIC0.46□□□□□ -2.34
TMEM238LA0A1B0GVL6 SNORD115-25-201ENST00000362619 82 ntBASIC0.45□□□□□ -2.34
TMEM238LA0A1B0GVL6 MIR106A-201ENST00000384870 81 ntBASIC0.45□□□□□ -2.34
TMEM238LA0A1B0GVL6 MIR643-201ENST00000385267 97 ntBASIC0.45□□□□□ -2.34
TMEM238LA0A1B0GVL6 RNU7-174P-201ENST00000516248 59 ntBASIC0.45□□□□□ -2.34
TMEM238LA0A1B0GVL6 AC243829.3-201ENST00000622177 108 ntBASIC0.45□□□□□ -2.34
TMEM238LA0A1B0GVL6 AC090617.8-201ENST00000623339 167 ntBASIC0.45□□□□□ -2.34
TMEM238LA0A1B0GVL6 Y_RNA.500-201ENST00000384466 111 ntBASIC0.44□□□□□ -2.34
TMEM238LA0A1B0GVL6 RNU6-337P-201ENST00000391243 106 ntBASIC0.44□□□□□ -2.34
TMEM238LA0A1B0GVL6 RNU6-698P-201ENST00000363523 107 ntBASIC0.43□□□□□ -2.34
TMEM238LA0A1B0GVL6 RNU6-34P-201ENST00000364874 107 ntBASIC0.43□□□□□ -2.34
TMEM238LA0A1B0GVL6 MIR630-201ENST00000384957 97 ntBASIC0.43□□□□□ -2.34
TMEM238LA0A1B0GVL6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.43□□□□□ -2.34
TMEM238LA0A1B0GVL6 MIR1255B2-201ENST00000408618 67 ntBASIC0.43□□□□□ -2.34
TMEM238LA0A1B0GVL6 AL021921.1-201ENST00000442774 93 ntBASIC0.43□□□□□ -2.34
TMEM238LA0A1B0GVL6 AC108740.1-201ENST00000498629 225 ntBASIC0.43□□□□□ -2.34
TMEM238LA0A1B0GVL6 SCARNA21.1-201ENST00000515996 128 ntBASIC0.43□□□□□ -2.34
TMEM238LA0A1B0GVL6 RNA5SP134-201ENST00000516492 96 ntBASIC0.42□□□□□ -2.34
TMEM238LA0A1B0GVL6 RNU6-548P-201ENST00000517083 115 ntBASIC0.42□□□□□ -2.34
TMEM238LA0A1B0GVL6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
TMEM238LA0A1B0GVL6 RNU6-502P-201ENST00000362419 108 ntBASIC0.41□□□□□ -2.34
TMEM238LA0A1B0GVL6 MIR483-201ENST00000385070 76 ntBASIC0.41□□□□□ -2.34
TMEM238LA0A1B0GVL6 SNORD113-2-201ENST00000391082 72 ntBASIC0.41□□□□□ -2.34
TMEM238LA0A1B0GVL6 AP000676.1-201ENST00000533307 52 ntBASIC0.41□□□□□ -2.34
TMEM238LA0A1B0GVL6 MIR4303-201ENST00000581299 66 ntBASIC0.41□□□□□ -2.34
TMEM238LA0A1B0GVL6 MIR4315-1-201ENST00000636800 73 ntBASIC0.41□□□□□ -2.34
TMEM238LA0A1B0GVL6 MIR4315-2-201ENST00000640925 73 ntBASIC0.41□□□□□ -2.34
TMEM238LA0A1B0GVL6 RNA5SP98-201ENST00000363158 137 ntBASIC0.4□□□□□ -2.35
TMEM238LA0A1B0GVL6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC0.4□□□□□ -2.35
TMEM238LA0A1B0GVL6 RNU6-518P-201ENST00000516056 96 ntBASIC0.4□□□□□ -2.35
TMEM238LA0A1B0GVL6 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.4□□□□□ -2.35
TMEM238LA0A1B0GVL6 MIRLET7B-201ENST00000385140 83 ntBASIC0.39□□□□□ -2.35
TMEM238LA0A1B0GVL6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
TMEM238LA0A1B0GVL6 Y_RNA.333-201ENST00000365274 102 ntBASIC0.38□□□□□ -2.35
TMEM238LA0A1B0GVL6 SNORA70B-201ENST00000384210 135 ntBASIC0.38□□□□□ -2.35
TMEM238LA0A1B0GVL6 MIR9-2-201ENST00000384838 87 ntBASIC0.38□□□□□ -2.35
TMEM238LA0A1B0GVL6 MIR892B-201ENST00000401279 77 ntBASIC0.38□□□□□ -2.35
TMEM238LA0A1B0GVL6 MIR548J-201ENST00000408833 112 ntBASIC0.38□□□□□ -2.35
TMEM238LA0A1B0GVL6 AC110620.1-201ENST00000416042 228 ntBASIC0.38□□□□□ -2.35
TMEM238LA0A1B0GVL6 RNA5SP470-201ENST00000516463 106 ntBASIC0.38□□□□□ -2.35
TMEM238LA0A1B0GVL6 MIR4698-201ENST00000577795 80 ntBASIC0.38□□□□□ -2.35
TMEM238LA0A1B0GVL6 MIR4672-201ENST00000583126 81 ntBASIC0.38□□□□□ -2.35
TMEM238LA0A1B0GVL6 MIR6514-201ENST00000622549 70 ntBASIC0.38□□□□□ -2.35
TMEM238LA0A1B0GVL6 RNA5SP325-201ENST00000363756 130 ntBASIC0.37□□□□□ -2.35
TMEM238LA0A1B0GVL6 SNORA25.5-201ENST00000363782 126 ntBASIC0.37□□□□□ -2.35
TMEM238LA0A1B0GVL6 UBE2DNL-203ENST00000474922 222 ntBASIC0.37□□□□□ -2.35
TMEM238LA0A1B0GVL6 MIR6835-201ENST00000621552 64 ntBASIC0.37□□□□□ -2.35
TMEM238LA0A1B0GVL6 Y_RNA.246-201ENST00000364495 108 ntBASIC0.36□□□□□ -2.35
TMEM238LA0A1B0GVL6 MIR610-201ENST00000385139 96 ntBASIC0.36□□□□□ -2.35
TMEM238LA0A1B0GVL6 MIR519A2-201ENST00000384990 87 ntBASIC0.35□□□□□ -2.35
TMEM238LA0A1B0GVL6 RNA5SP163-201ENST00000410304 99 ntBASIC0.35□□□□□ -2.35
TMEM238LA0A1B0GVL6 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.35□□□□□ -2.35
TMEM238LA0A1B0GVL6 CR383656.4-201ENST00000546909 122 ntBASIC0.35□□□□□ -2.35
TMEM238LA0A1B0GVL6 RNU6-92P-201ENST00000605893 104 ntBASIC0.35□□□□□ -2.35
TMEM238LA0A1B0GVL6 U4.4-201ENST00000620626 117 ntBASIC0.35□□□□□ -2.35
TMEM238LA0A1B0GVL6 MIR208A-201ENST00000362287 71 ntBASIC0.34□□□□□ -2.36
TMEM238LA0A1B0GVL6 RNU6-669P-201ENST00000365575 107 ntBASIC0.33□□□□□ -2.36
TMEM238LA0A1B0GVL6 RNU6-180P-201ENST00000516697 61 ntBASIC0.33□□□□□ -2.36
TMEM238LA0A1B0GVL6 RNA5SP192-201ENST00000364404 120 ntBASIC0.32□□□□□ -2.36
TMEM238LA0A1B0GVL6 MIR548H2-201ENST00000408874 88 ntBASIC0.32□□□□□ -2.36
TMEM238LA0A1B0GVL6 RNU7-95P-201ENST00000459222 64 ntBASIC0.32□□□□□ -2.36
TMEM238LA0A1B0GVL6 RNU7-154P-201ENST00000516194 62 ntBASIC0.32□□□□□ -2.36
TMEM238LA0A1B0GVL6 MIR593-201ENST00000384856 100 ntBASIC0.31□□□□□ -2.36
TMEM238LA0A1B0GVL6 AP1B1P2-201ENST00000416196 106 ntBASIC0.31□□□□□ -2.36
TMEM238LA0A1B0GVL6 MIR4743-201ENST00000584576 69 ntBASIC0.31□□□□□ -2.36
TMEM238LA0A1B0GVL6 AC104408.1-201ENST00000605241 170 ntBASIC0.31□□□□□ -2.36
TMEM238LA0A1B0GVL6 MIR148A-201ENST00000362215 68 ntBASIC0.3□□□□□ -2.36
TMEM238LA0A1B0GVL6 RNU6-940P-201ENST00000363433 104 ntBASIC0.3□□□□□ -2.36
TMEM238LA0A1B0GVL6 Y_RNA.325-201ENST00000365171 122 ntBASIC0.3□□□□□ -2.36
TMEM238LA0A1B0GVL6 RNA5SP214-201ENST00000363378 118 ntBASIC0.29□□□□□ -2.36
TMEM238LA0A1B0GVL6 MIR508-201ENST00000384857 115 ntBASIC0.29□□□□□ -2.36
TMEM238LA0A1B0GVL6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.29□□□□□ -2.36
TMEM238LA0A1B0GVL6 snoR1.1-201ENST00000628177 80 ntBASIC0.29□□□□□ -2.36
TMEM238LA0A1B0GVL6 Y_RNA.74-201ENST00000362911 99 ntBASIC0.28□□□□□ -2.36
TMEM238LA0A1B0GVL6 SNORA42.1-201ENST00000363515 137 ntBASIC0.28□□□□□ -2.36
TMEM238LA0A1B0GVL6 SNORA50A-201ENST00000384225 134 ntBASIC0.28□□□□□ -2.36
TMEM238LA0A1B0GVL6 MIR145-201ENST00000384967 88 ntBASIC0.27□□□□□ -2.37
TMEM238LA0A1B0GVL6 RNU6-1246P-201ENST00000391064 107 ntBASIC0.27□□□□□ -2.37
TMEM238LA0A1B0GVL6 AC114737.2-201ENST00000421583 173 ntBASIC0.27□□□□□ -2.37
TMEM238LA0A1B0GVL6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.27□□□□□ -2.37
TMEM238LA0A1B0GVL6 SNORD60.1-201ENST00000362451 73 ntBASIC0.25□□□□□ -2.37
TMEM238LA0A1B0GVL6 RNU4-62P-201ENST00000410125 130 ntBASIC0.25□□□□□ -2.37
TMEM238LA0A1B0GVL6 RNU7-159P-201ENST00000459284 62 ntBASIC0.25□□□□□ -2.37
TMEM238LA0A1B0GVL6 MIR466-201ENST00000580653 84 ntBASIC0.25□□□□□ -2.37
TMEM238LA0A1B0GVL6 AL353803.5-201ENST00000599815 141 ntBASIC0.25□□□□□ -2.37
TMEM238LA0A1B0GVL6 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.25□□□□□ -2.37
TMEM238LA0A1B0GVL6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
TMEM238LA0A1B0GVL6 SNORD115-23-201ENST00000364461 82 ntBASIC0.24□□□□□ -2.37
TMEM238LA0A1B0GVL6 RNU6-122P-201ENST00000516818 107 ntBASIC0.24□□□□□ -2.37
TMEM238LA0A1B0GVL6 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
TMEM238LA0A1B0GVL6 RNU6-900P-201ENST00000384498 102 ntBASIC0.23□□□□□ -2.37
TMEM238LA0A1B0GVL6 RNU6-455P-201ENST00000384681 107 ntBASIC0.23□□□□□ -2.37
TMEM238LA0A1B0GVL6 MIR527-201ENST00000385244 85 ntBASIC0.23□□□□□ -2.37
TMEM238LA0A1B0GVL6 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.23□□□□□ -2.37
TMEM238LA0A1B0GVL6 RNU6-1133P-201ENST00000410963 100 ntBASIC0.23□□□□□ -2.37
TMEM238LA0A1B0GVL6 RNA5SP247-201ENST00000411181 105 ntBASIC0.23□□□□□ -2.37
TMEM238LA0A1B0GVL6 RNU7-165P-201ENST00000458864 60 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 299.9 ms