Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MIR6514-201ENST00000622549 70 ntBASIC0.07□□□□□ -2.4
IGHV4-28A0A0C4DH34 Y_RNA.115-201ENST00000363272 98 ntBASIC0.06□□□□□ -2.4
IGHV4-28A0A0C4DH34 RNU6-990P-201ENST00000364385 104 ntBASIC0.06□□□□□ -2.4
IGHV4-28A0A0C4DH34 RNU6-686P-201ENST00000364839 107 ntBASIC0.06□□□□□ -2.4
IGHV4-28A0A0C4DH34 Y_RNA.316-201ENST00000365118 111 ntBASIC0.06□□□□□ -2.4
IGHV4-28A0A0C4DH34 AL691482.2-201ENST00000457453 84 ntBASIC0.06□□□□□ -2.4
IGHV4-28A0A0C4DH34 MIR4679-1-201ENST00000637619 75 ntBASIC0.06□□□□□ -2.4
IGHV4-28A0A0C4DH34 RNU6-1039P-201ENST00000383931 107 ntBASIC0.05□□□□□ -2.4
IGHV4-28A0A0C4DH34 MIR203A-201ENST00000384836 110 ntBASIC0.05□□□□□ -2.4
IGHV4-28A0A0C4DH34 SNORA26.2-201ENST00000390922 122 ntBASIC0.05□□□□□ -2.4
IGHV4-28A0A0C4DH34 MIR548E-201ENST00000408287 88 ntBASIC0.05□□□□□ -2.4
IGHV4-28A0A0C4DH34 RNY4P29-201ENST00000410801 97 ntBASIC0.05□□□□□ -2.4
IGHV4-28A0A0C4DH34 MIR4743-201ENST00000584576 69 ntBASIC0.05□□□□□ -2.4
IGHV4-28A0A0C4DH34 MIR6509-201ENST00000614603 85 ntBASIC0.05□□□□□ -2.4
IGHV4-28A0A0C4DH34 RNU6-681P-201ENST00000364012 104 ntBASIC0.04□□□□□ -2.4
IGHV4-28A0A0C4DH34 RNU6-1036P-201ENST00000383959 104 ntBASIC0.04□□□□□ -2.4
IGHV4-28A0A0C4DH34 MIR106A-201ENST00000384870 81 ntBASIC0.04□□□□□ -2.4
IGHV4-28A0A0C4DH34 RNA5SP63-201ENST00000391225 112 ntBASIC0.04□□□□□ -2.4
IGHV4-28A0A0C4DH34 RNU7-159P-201ENST00000459284 62 ntBASIC0.04□□□□□ -2.4
IGHV4-28A0A0C4DH34 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.04□□□□□ -2.4
IGHV4-28A0A0C4DH34 MIRLET7A1-201ENST00000362295 80 ntBASIC0.03□□□□□ -2.4
IGHV4-28A0A0C4DH34 RNU6-180P-201ENST00000516697 61 ntBASIC0.03□□□□□ -2.4
IGHV4-28A0A0C4DH34 Y_RNA.388-201ENST00000383919 113 ntBASIC0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNU6-1152P-201ENST00000384576 107 ntBASIC0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 CR383656.4-201ENST00000546909 122 ntBASIC0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 AL109933.3-201ENST00000619095 188 ntBASIC0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNU6-260P-201ENST00000384092 107 ntBASIC0.01□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNU7-165P-201ENST00000458864 60 ntBASIC0.01□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNU6-752P-201ENST00000516376 102 ntBASIC0.01□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNU6-303P-201ENST00000517091 106 ntBASIC0.01□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNA5SP457-201ENST00000363657 124 ntBASIC0□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNA5SP173-201ENST00000364857 136 ntBASIC0□□□□□ -2.41
IGHV4-28A0A0C4DH34 SNORA63.6-201ENST00000364921 119 ntBASIC0□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNU6-929P-201ENST00000384429 107 ntBASIC0□□□□□ -2.41
IGHV4-28A0A0C4DH34 AC021146.9-201ENST00000512503 156 ntBASIC0□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNA5SP147-201ENST00000516493 109 ntBASIC0□□□□□ -2.41
IGHV4-28A0A0C4DH34 MIR4666B-201ENST00000578142 81 ntBASIC0□□□□□ -2.41
IGHV4-28A0A0C4DH34 MIR3657-201ENST00000584818 117 ntBASIC0□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNU6-315P-201ENST00000362666 107 ntBASIC-0.01□□□□□ -2.41
IGHV4-28A0A0C4DH34 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.01□□□□□ -2.41
IGHV4-28A0A0C4DH34 SNORA49-201ENST00000386157 136 ntBASIC-0.01□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNU6-380P-201ENST00000410207 107 ntBASIC-0.01□□□□□ -2.41
IGHV4-28A0A0C4DH34 snoU13.13-201ENST00000458842 104 ntBASIC-0.01□□□□□ -2.41
IGHV4-28A0A0C4DH34 SNORA40.17-201ENST00000517256 115 ntBASIC-0.01□□□□□ -2.41
IGHV4-28A0A0C4DH34 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
IGHV4-28A0A0C4DH34 MIR2909-201ENST00000617113 69 ntBASIC-0.01□□□□□ -2.41
IGHV4-28A0A0C4DH34 MIR1245B-201ENST00000636115 69 ntBASIC-0.01□□□□□ -2.41
IGHV4-28A0A0C4DH34 MIR148A-201ENST00000362215 68 ntBASIC-0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNA5SP98-201ENST00000363158 137 ntBASIC-0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNU6-573P-201ENST00000383938 106 ntBASIC-0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNU6-787P-201ENST00000384032 107 ntBASIC-0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 MIR1302-4-201ENST00000408701 150 ntBASIC-0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 MIR5190-201ENST00000581537 80 ntBASIC-0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 MIR4484-201ENST00000582855 83 ntBASIC-0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 MIR4712-201ENST00000583750 82 ntBASIC-0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.02□□□□□ -2.41
IGHV4-28A0A0C4DH34 SNORA2.1-201ENST00000363089 137 ntBASIC-0.03□□□□□ -2.41
IGHV4-28A0A0C4DH34 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.03□□□□□ -2.41
IGHV4-28A0A0C4DH34 SNORD2-201ENST00000459163 69 ntBASIC-0.03□□□□□ -2.41
IGHV4-28A0A0C4DH34 RNU6-330P-201ENST00000363015 107 ntBASIC-0.04□□□□□ -2.42
IGHV4-28A0A0C4DH34 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
IGHV4-28A0A0C4DH34 AC074348.1-201ENST00000426503 132 ntBASIC-0.04□□□□□ -2.42
IGHV4-28A0A0C4DH34 AP000676.1-201ENST00000533307 52 ntBASIC-0.04□□□□□ -2.42
IGHV4-28A0A0C4DH34 SNORA8.1-201ENST00000384250 140 ntBASIC-0.05□□□□□ -2.42
IGHV4-28A0A0C4DH34 RNU6-807P-201ENST00000516805 107 ntBASIC-0.05□□□□□ -2.42
IGHV4-28A0A0C4DH34 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.05□□□□□ -2.42
IGHV4-28A0A0C4DH34 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.06□□□□□ -2.42
IGHV4-28A0A0C4DH34 SNORD115-25-201ENST00000362619 82 ntBASIC-0.06□□□□□ -2.42
IGHV4-28A0A0C4DH34 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
IGHV4-28A0A0C4DH34 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.06□□□□□ -2.42
IGHV4-28A0A0C4DH34 MIR1297-201ENST00000637311 77 ntBASIC-0.06□□□□□ -2.42
IGHV4-28A0A0C4DH34 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.07□□□□□ -2.42
IGHV4-28A0A0C4DH34 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.07□□□□□ -2.42
IGHV4-28A0A0C4DH34 MIR3675-201ENST00000583661 73 ntBASIC-0.07□□□□□ -2.42
IGHV4-28A0A0C4DH34 AC145423.2-201ENST00000610631 239 ntBASIC-0.07□□□□□ -2.42
IGHV4-28A0A0C4DH34 MIR6507-201ENST00000613630 70 ntBASIC-0.07□□□□□ -2.42
IGHV4-28A0A0C4DH34 MIR3202-2-201ENST00000635980 79 ntBASIC-0.07□□□□□ -2.42
IGHV4-28A0A0C4DH34 MIR371B-201ENST00000638082 66 ntBASIC-0.08□□□□□ -2.42
IGHV4-28A0A0C4DH34 RNA5SP257-201ENST00000363023 116 ntBASIC-0.09□□□□□ -2.42
IGHV4-28A0A0C4DH34 AC244250.2-201ENST00000418731 148 ntBASIC-0.09□□□□□ -2.42
IGHV4-28A0A0C4DH34 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.09□□□□□ -2.42
IGHV4-28A0A0C4DH34 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.09□□□□□ -2.42
IGHV4-28A0A0C4DH34 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.1□□□□□ -2.43
IGHV4-28A0A0C4DH34 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.1□□□□□ -2.43
IGHV4-28A0A0C4DH34 RNU6-46P-201ENST00000383860 107 ntBASIC-0.1□□□□□ -2.43
IGHV4-28A0A0C4DH34 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.1□□□□□ -2.43
IGHV4-28A0A0C4DH34 AC104692.1-201ENST00000472406 90 ntBASIC-0.1□□□□□ -2.43
IGHV4-28A0A0C4DH34 U6.96-201ENST00000636425 70 ntBASIC-0.1□□□□□ -2.43
IGHV4-28A0A0C4DH34 RNU6-455P-201ENST00000384681 107 ntBASIC-0.11□□□□□ -2.43
IGHV4-28A0A0C4DH34 MIR6773-201ENST00000612812 74 ntBASIC-0.11□□□□□ -2.43
IGHV4-28A0A0C4DH34 RNU6-502P-201ENST00000362419 108 ntBASIC-0.12□□□□□ -2.43
IGHV4-28A0A0C4DH34 RNU6-228P-201ENST00000362700 106 ntBASIC-0.12□□□□□ -2.43
IGHV4-28A0A0C4DH34 SNORA33.1-201ENST00000364957 130 ntBASIC-0.12□□□□□ -2.43
IGHV4-28A0A0C4DH34 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.12□□□□□ -2.43
IGHV4-28A0A0C4DH34 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.12□□□□□ -2.43
IGHV4-28A0A0C4DH34 SCARNA18B-201ENST00000458806 135 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 226.9 ms