Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 U7.4-201ENST00000614961 63 ntBASIC0.75□□□□□ -2.29
CTDP1Q9Y5B0 AC073869.9-201ENST00000641610 120 ntBASIC0.75□□□□□ -2.29
CTDP1Q9Y5B0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CTDP1Q9Y5B0 RNA5SP121-201ENST00000516537 101 ntBASIC0.74□□□□□ -2.29
CTDP1Q9Y5B0 NAMPTP3-201ENST00000569273 224 ntBASIC0.74□□□□□ -2.29
CTDP1Q9Y5B0 RN7SL793P-201ENST00000583259 296 ntBASIC0.74□□□□□ -2.29
CTDP1Q9Y5B0 SNORA25.18-201ENST00000607153 114 ntBASIC0.74□□□□□ -2.29
CTDP1Q9Y5B0 AC145423.2-201ENST00000610631 239 ntBASIC0.74□□□□□ -2.29
CTDP1Q9Y5B0 RNU6-382P-201ENST00000365181 106 ntBASIC0.73□□□□□ -2.29
CTDP1Q9Y5B0 RNU6-54P-201ENST00000365563 107 ntBASIC0.73□□□□□ -2.29
CTDP1Q9Y5B0 RNU6-274P-201ENST00000459566 107 ntBASIC0.73□□□□□ -2.29
CTDP1Q9Y5B0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.73□□□□□ -2.29
CTDP1Q9Y5B0 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.73□□□□□ -2.29
CTDP1Q9Y5B0 Y_RNA.258-201ENST00000364613 105 ntBASIC0.72□□□□□ -2.29
CTDP1Q9Y5B0 MIR889-201ENST00000401280 79 ntBASIC0.72□□□□□ -2.29
CTDP1Q9Y5B0 SNORA40.8-201ENST00000411034 126 ntBASIC0.72□□□□□ -2.29
CTDP1Q9Y5B0 SNORD71-201ENST00000411292 86 ntBASIC0.72□□□□□ -2.29
CTDP1Q9Y5B0 AC074348.1-201ENST00000426503 132 ntBASIC0.72□□□□□ -2.29
CTDP1Q9Y5B0 SCARNA18B-201ENST00000458806 135 ntBASIC0.72□□□□□ -2.29
CTDP1Q9Y5B0 RNU6-776P-201ENST00000364403 104 ntBASIC0.71□□□□□ -2.3
CTDP1Q9Y5B0 RNU6-1022P-201ENST00000365049 104 ntBASIC0.71□□□□□ -2.3
CTDP1Q9Y5B0 SNORD75.2-201ENST00000408784 58 ntBASIC0.71□□□□□ -2.3
CTDP1Q9Y5B0 AC006210.1-201ENST00000424882 111 ntBASIC0.71□□□□□ -2.3
CTDP1Q9Y5B0 AC018659.1-201ENST00000551083 169 ntBASIC0.71□□□□□ -2.3
CTDP1Q9Y5B0 AC069503.3-201ENST00000618674 145 ntBASIC0.71□□□□□ -2.3
CTDP1Q9Y5B0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.7□□□□□ -2.3
CTDP1Q9Y5B0 RNU6-495P-201ENST00000362995 107 ntBASIC0.7□□□□□ -2.3
CTDP1Q9Y5B0 SNORD118-201ENST00000363593 134 ntBASIC0.7□□□□□ -2.3
CTDP1Q9Y5B0 RNU6-154P-201ENST00000384306 106 ntBASIC0.7□□□□□ -2.3
CTDP1Q9Y5B0 SNORD110-201ENST00000408189 75 ntBASIC0.7□□□□□ -2.3
CTDP1Q9Y5B0 AC069271.1-201ENST00000445577 156 ntBASIC0.7□□□□□ -2.3
CTDP1Q9Y5B0 RNU7-24P-201ENST00000458867 62 ntBASIC0.7□□□□□ -2.3
CTDP1Q9Y5B0 RNU5B-6P-201ENST00000516765 68 ntBASIC0.7□□□□□ -2.3
CTDP1Q9Y5B0 MIR4752-201ENST00000579672 72 ntBASIC0.7□□□□□ -2.3
CTDP1Q9Y5B0 MIR5087-201ENST00000635826 76 ntBASIC0.7□□□□□ -2.3
CTDP1Q9Y5B0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
CTDP1Q9Y5B0 MIR936-201ENST00000401264 98 ntBASIC0.69□□□□□ -2.3
CTDP1Q9Y5B0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CTDP1Q9Y5B0 uc_338.17-201ENST00000619633 179 ntBASIC0.69□□□□□ -2.3
CTDP1Q9Y5B0 Y_RNA.788-201ENST00000622394 112 ntBASIC0.69□□□□□ -2.3
CTDP1Q9Y5B0 SNORA8.1-201ENST00000384250 140 ntBASIC0.68□□□□□ -2.3
CTDP1Q9Y5B0 AL691482.2-201ENST00000457453 84 ntBASIC0.68□□□□□ -2.3
CTDP1Q9Y5B0 RNU4-54P-201ENST00000516428 129 ntBASIC0.68□□□□□ -2.3
CTDP1Q9Y5B0 Y_RNA.681-201ENST00000516445 113 ntBASIC0.68□□□□□ -2.3
CTDP1Q9Y5B0 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.68□□□□□ -2.3
CTDP1Q9Y5B0 RNU6-330P-201ENST00000363015 107 ntBASIC0.67□□□□□ -2.3
CTDP1Q9Y5B0 RNA5SP325-201ENST00000363756 130 ntBASIC0.67□□□□□ -2.3
CTDP1Q9Y5B0 Y_RNA.205-201ENST00000364128 113 ntBASIC0.67□□□□□ -2.3
CTDP1Q9Y5B0 MIR518A1-201ENST00000385068 85 ntBASIC0.67□□□□□ -2.3
CTDP1Q9Y5B0 RNU6-229P-201ENST00000516614 102 ntBASIC0.67□□□□□ -2.3
CTDP1Q9Y5B0 SNORA70.25-201ENST00000612741 95 ntBASIC0.67□□□□□ -2.3
CTDP1Q9Y5B0 AC243829.3-201ENST00000622177 108 ntBASIC0.67□□□□□ -2.3
CTDP1Q9Y5B0 RNU6-1296P-201ENST00000383879 107 ntBASIC0.66□□□□□ -2.3
CTDP1Q9Y5B0 SNORD42B-201ENST00000458893 67 ntBASIC0.66□□□□□ -2.3
CTDP1Q9Y5B0 RNU6-752P-201ENST00000516376 102 ntBASIC0.66□□□□□ -2.3
CTDP1Q9Y5B0 RNU6-70P-201ENST00000516438 60 ntBASIC0.66□□□□□ -2.3
CTDP1Q9Y5B0 MIR3134-201ENST00000579433 74 ntBASIC0.66□□□□□ -2.3
CTDP1Q9Y5B0 MIR3675-201ENST00000583661 73 ntBASIC0.66□□□□□ -2.3
CTDP1Q9Y5B0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.65□□□□□ -2.3
CTDP1Q9Y5B0 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.31
CTDP1Q9Y5B0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.65□□□□□ -2.31
CTDP1Q9Y5B0 SNORD114-23-201ENST00000363536 72 ntBASIC0.64□□□□□ -2.31
CTDP1Q9Y5B0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CTDP1Q9Y5B0 AC098934.3-201ENST00000430450 190 ntBASIC0.64□□□□□ -2.31
CTDP1Q9Y5B0 MIR4473-201ENST00000583731 91 ntBASIC0.64□□□□□ -2.31
CTDP1Q9Y5B0 SNORD114-4-201ENST00000363962 75 ntBASIC0.63□□□□□ -2.31
CTDP1Q9Y5B0 RNU6-1039P-201ENST00000383931 107 ntBASIC0.63□□□□□ -2.31
CTDP1Q9Y5B0 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
CTDP1Q9Y5B0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.63□□□□□ -2.31
CTDP1Q9Y5B0 RNU6-411P-201ENST00000384451 107 ntBASIC0.63□□□□□ -2.31
CTDP1Q9Y5B0 MIR5706-201ENST00000579841 80 ntBASIC0.63□□□□□ -2.31
CTDP1Q9Y5B0 MIR6509-201ENST00000614603 85 ntBASIC0.63□□□□□ -2.31
CTDP1Q9Y5B0 MIR664A-201ENST00000626086 82 ntBASIC0.63□□□□□ -2.31
CTDP1Q9Y5B0 SNORA2A-201ENST00000383885 135 ntBASIC0.62□□□□□ -2.31
CTDP1Q9Y5B0 Y_RNA.407-201ENST00000383986 113 ntBASIC0.62□□□□□ -2.31
CTDP1Q9Y5B0 Y_RNA.545-201ENST00000384652 105 ntBASIC0.62□□□□□ -2.31
CTDP1Q9Y5B0 RNA5SP499-201ENST00000363982 119 ntBASIC0.61□□□□□ -2.31
CTDP1Q9Y5B0 MIR193B-201ENST00000384907 83 ntBASIC0.61□□□□□ -2.31
CTDP1Q9Y5B0 MIR4711-201ENST00000578274 70 ntBASIC0.61□□□□□ -2.31
CTDP1Q9Y5B0 RNU1-29P-201ENST00000606574 126 ntBASIC0.61□□□□□ -2.31
CTDP1Q9Y5B0 Y_RNA.565-201ENST00000384719 101 ntBASIC0.6□□□□□ -2.31
CTDP1Q9Y5B0 MIR203A-201ENST00000384836 110 ntBASIC0.6□□□□□ -2.31
CTDP1Q9Y5B0 AC114737.2-201ENST00000421583 173 ntBASIC0.6□□□□□ -2.31
CTDP1Q9Y5B0 U7.6-201ENST00000610841 64 ntBASIC0.6□□□□□ -2.31
CTDP1Q9Y5B0 uc_338.10-201ENST00000621872 182 ntBASIC0.59□□□□□ -2.31
CTDP1Q9Y5B0 RNU6-260P-201ENST00000384092 107 ntBASIC0.58□□□□□ -2.32
CTDP1Q9Y5B0 HMGN2P22-201ENST00000427588 175 ntBASIC0.58□□□□□ -2.32
CTDP1Q9Y5B0 MIR548AE1-201ENST00000583292 70 ntBASIC0.58□□□□□ -2.32
CTDP1Q9Y5B0 AC010487.4-201ENST00000637027 61 ntBASIC0.58□□□□□ -2.32
CTDP1Q9Y5B0 SNORD45.1-201ENST00000363181 77 ntBASIC0.57□□□□□ -2.32
CTDP1Q9Y5B0 RNU6-1241P-201ENST00000384536 107 ntBASIC0.57□□□□□ -2.32
CTDP1Q9Y5B0 MIR154-201ENST00000385243 84 ntBASIC0.57□□□□□ -2.32
CTDP1Q9Y5B0 MIR652-201ENST00000385278 98 ntBASIC0.57□□□□□ -2.32
CTDP1Q9Y5B0 RNU6-587P-201ENST00000391282 106 ntBASIC0.57□□□□□ -2.32
CTDP1Q9Y5B0 Y_RNA.125-201ENST00000363371 111 ntBASIC0.56□□□□□ -2.32
CTDP1Q9Y5B0 MIR760-201ENST00000390220 80 ntBASIC0.56□□□□□ -2.32
CTDP1Q9Y5B0 RNA5SP193-201ENST00000410353 107 ntBASIC0.56□□□□□ -2.32
CTDP1Q9Y5B0 RNU6-848P-201ENST00000515948 107 ntBASIC0.56□□□□□ -2.32
CTDP1Q9Y5B0 RNU6-863P-201ENST00000515989 104 ntBASIC0.56□□□□□ -2.32
CTDP1Q9Y5B0 RNU6-617P-201ENST00000516147 107 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 267.8 ms