Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.25□□□□□ -2.45
SHANK1Q9Y566 RNU6-455P-201ENST00000384681 107 ntBASIC-0.25□□□□□ -2.45
SHANK1Q9Y566 RNU6-284P-201ENST00000411105 106 ntBASIC-0.25□□□□□ -2.45
SHANK1Q9Y566 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.25□□□□□ -2.45
SHANK1Q9Y566 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.25□□□□□ -2.45
SHANK1Q9Y566 MIR4777-201ENST00000583710 86 ntBASIC-0.25□□□□□ -2.45
SHANK1Q9Y566 MIR3914-2-201ENST00000637339 95 ntBASIC-0.25□□□□□ -2.45
SHANK1Q9Y566 AL157777.2-201ENST00000258070 137 ntBASIC-0.25□□□□□ -2.45
SHANK1Q9Y566 MIR148A-201ENST00000362215 68 ntBASIC-0.25□□□□□ -2.45
SHANK1Q9Y566 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.25□□□□□ -2.45
SHANK1Q9Y566 RNU6-154P-201ENST00000384306 106 ntBASIC-0.25□□□□□ -2.45
SHANK1Q9Y566 RNU6-175P-201ENST00000516896 107 ntBASIC-0.25□□□□□ -2.45
SHANK1Q9Y566 RNU6-495P-201ENST00000362995 107 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 RNU6-704P-201ENST00000364162 103 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 RNU6-659P-201ENST00000516454 104 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 MIR548AE1-201ENST00000583292 70 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 RNU5F-1-201ENST00000362507 117 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 AC244090.1-201ENST00000441884 93 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 RNU6-904P-201ENST00000516206 101 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 RNU6-287P-201ENST00000516230 98 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 SNORA25.13-201ENST00000516395 103 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.26□□□□□ -2.45
SHANK1Q9Y566 SNORD58A-201ENST00000383875 65 ntBASIC-0.27□□□□□ -2.45
SHANK1Q9Y566 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.27□□□□□ -2.45
SHANK1Q9Y566 U3.27-201ENST00000391237 200 ntBASIC-0.27□□□□□ -2.45
SHANK1Q9Y566 SNORA3B-201ENST00000391305 131 ntBASIC-0.27□□□□□ -2.45
SHANK1Q9Y566 SNORD75.1-201ENST00000408373 60 ntBASIC-0.27□□□□□ -2.45
SHANK1Q9Y566 RNU7-85P-201ENST00000458851 63 ntBASIC-0.27□□□□□ -2.45
SHANK1Q9Y566 SNORD4B-201ENST00000459083 72 ntBASIC-0.27□□□□□ -2.45
SHANK1Q9Y566 AC114755.3-201ENST00000481111 251 ntBASIC-0.27□□□□□ -2.45
SHANK1Q9Y566 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.27□□□□□ -2.45
SHANK1Q9Y566 AL590491.3-201ENST00000610731 82 ntBASIC-0.27□□□□□ -2.45
SHANK1Q9Y566 RNY4P7-201ENST00000364600 96 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 SNORD116-14-201ENST00000383894 92 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 SNORD116-17-201ENST00000383929 92 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 SNORD116-15-201ENST00000384445 92 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 SNORD116-19-201ENST00000384729 92 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 SNORD18.2-201ENST00000459604 70 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 MIR4441-201ENST00000582623 100 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 MIR6514-201ENST00000622549 70 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 AL035470.1-201ENST00000622571 220 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 U8.6-201ENST00000364939 135 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 MIRLET7B-201ENST00000385140 83 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 SCARNA17-201ENST00000516183 144 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 RNU6-719P-201ENST00000516671 104 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 RNU6-537P-201ENST00000517277 103 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 MIR6129-201ENST00000616087 109 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 MIR6851-201ENST00000617060 67 ntBASIC-0.28□□□□□ -2.45
SHANK1Q9Y566 SNORD116-21-201ENST00000384507 92 ntBASIC-0.29□□□□□ -2.46
SHANK1Q9Y566 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
SHANK1Q9Y566 SNORA19.1-201ENST00000410656 129 ntBASIC-0.29□□□□□ -2.46
SHANK1Q9Y566 AL353813.1-201ENST00000440700 253 ntBASIC-0.29□□□□□ -2.46
SHANK1Q9Y566 RNU6-320P-201ENST00000516511 106 ntBASIC-0.29□□□□□ -2.46
SHANK1Q9Y566 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.29□□□□□ -2.46
SHANK1Q9Y566 RNU6-502P-201ENST00000362419 108 ntBASIC-0.29□□□□□ -2.46
SHANK1Q9Y566 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.29□□□□□ -2.46
SHANK1Q9Y566 RNU6-132P-201ENST00000383863 107 ntBASIC-0.29□□□□□ -2.46
SHANK1Q9Y566 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.29□□□□□ -2.46
SHANK1Q9Y566 SNORA13-201ENST00000458790 133 ntBASIC-0.29□□□□□ -2.46
SHANK1Q9Y566 SNORD22.1-201ENST00000516331 125 ntBASIC-0.29□□□□□ -2.46
SHANK1Q9Y566 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.29□□□□□ -2.46
SHANK1Q9Y566 RNY4P27-201ENST00000363341 96 ntBASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 MIR652-201ENST00000385278 98 ntBASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 RNU6-554P-201ENST00000410466 106 ntBASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 RNU7-55P-201ENST00000459426 62 ntBASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 RNU7-188P-201ENST00000517063 64 ntBASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 RNU6-22P-201ENST00000384355 107 ntBASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 RNU6-519P-201ENST00000410590 108 ntBASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 AP000676.1-201ENST00000533307 52 ntBASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 MIR3064-201ENST00000581130 66 ntBASIC-0.3□□□□□ -2.46
SHANK1Q9Y566 RNU2-51P-201ENST00000410708 197 ntBASIC-0.31□□□□□ -2.46
SHANK1Q9Y566 SCARNA23-201ENST00000516060 130 ntBASIC-0.31□□□□□ -2.46
SHANK1Q9Y566 SNORD115-37-201ENST00000363768 82 ntBASIC-0.32□□□□□ -2.46
SHANK1Q9Y566 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.32□□□□□ -2.46
SHANK1Q9Y566 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.32□□□□□ -2.46
SHANK1Q9Y566 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.32□□□□□ -2.46
SHANK1Q9Y566 RNU6-86P-201ENST00000606534 107 ntBASIC-0.32□□□□□ -2.46
SHANK1Q9Y566 RNU6-119P-201ENST00000364882 107 ntBASIC-0.32□□□□□ -2.46
SHANK1Q9Y566 RNU6-813P-201ENST00000384691 107 ntBASIC-0.32□□□□□ -2.46
SHANK1Q9Y566 SNORD83B-201ENST00000386745 93 ntBASIC-0.32□□□□□ -2.46
SHANK1Q9Y566 MIR548E-201ENST00000408287 88 ntBASIC-0.32□□□□□ -2.46
SHANK1Q9Y566 SNORD75.2-201ENST00000408784 58 ntBASIC-0.32□□□□□ -2.46
SHANK1Q9Y566 SNORA40.17-201ENST00000517256 115 ntBASIC-0.32□□□□□ -2.46
SHANK1Q9Y566 MIR6738-201ENST00000619620 64 ntBASIC-0.32□□□□□ -2.46
SHANK1Q9Y566 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.33□□□□□ -2.46
SHANK1Q9Y566 MIR582-201ENST00000365731 98 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms