Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SNORD114-23-201ENST00000363536 72 ntBASIC0.41□□□□□ -2.34
R3HCC1Q9Y3T6 Y_RNA.437-201ENST00000384113 113 ntBASIC0.41□□□□□ -2.34
R3HCC1Q9Y3T6 RNU6-1177P-201ENST00000391058 104 ntBASIC0.41□□□□□ -2.34
R3HCC1Q9Y3T6 MIR4677-201ENST00000584153 80 ntBASIC0.41□□□□□ -2.34
R3HCC1Q9Y3T6 MIR548AD-201ENST00000584780 82 ntBASIC0.41□□□□□ -2.34
R3HCC1Q9Y3T6 RNU6-624P-201ENST00000363411 107 ntBASIC0.4□□□□□ -2.35
R3HCC1Q9Y3T6 Y_RNA.258-201ENST00000364613 105 ntBASIC0.4□□□□□ -2.35
R3HCC1Q9Y3T6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
R3HCC1Q9Y3T6 MIR4679-1-201ENST00000637619 75 ntBASIC0.4□□□□□ -2.35
R3HCC1Q9Y3T6 SNORD42B-201ENST00000458893 67 ntBASIC0.39□□□□□ -2.35
R3HCC1Q9Y3T6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
R3HCC1Q9Y3T6 RNU6-127P-201ENST00000390897 107 ntBASIC0.38□□□□□ -2.35
R3HCC1Q9Y3T6 RNA5SP134-201ENST00000516492 96 ntBASIC0.38□□□□□ -2.35
R3HCC1Q9Y3T6 MIR1273G-201ENST00000577677 100 ntBASIC0.38□□□□□ -2.35
R3HCC1Q9Y3T6 RNU6-824P-201ENST00000363724 104 ntBASIC0.37□□□□□ -2.35
R3HCC1Q9Y3T6 Y_RNA.407-201ENST00000383986 113 ntBASIC0.37□□□□□ -2.35
R3HCC1Q9Y3T6 AL450471.1-201ENST00000447509 127 ntBASIC0.37□□□□□ -2.35
R3HCC1Q9Y3T6 AC010487.4-201ENST00000637027 61 ntBASIC0.37□□□□□ -2.35
R3HCC1Q9Y3T6 Y_RNA.426-201ENST00000384068 113 ntBASIC0.36□□□□□ -2.35
R3HCC1Q9Y3T6 RNU6-820P-201ENST00000384273 107 ntBASIC0.36□□□□□ -2.35
R3HCC1Q9Y3T6 RNU6-1108P-201ENST00000516308 104 ntBASIC0.36□□□□□ -2.35
R3HCC1Q9Y3T6 uc_338.10-201ENST00000621872 182 ntBASIC0.36□□□□□ -2.35
R3HCC1Q9Y3T6 RNU6-208P-201ENST00000362431 107 ntBASIC0.35□□□□□ -2.35
R3HCC1Q9Y3T6 RNU6-495P-201ENST00000362995 107 ntBASIC0.35□□□□□ -2.35
R3HCC1Q9Y3T6 RNU6-161P-201ENST00000363051 106 ntBASIC0.35□□□□□ -2.35
R3HCC1Q9Y3T6 MIR516B1-201ENST00000385211 90 ntBASIC0.35□□□□□ -2.35
R3HCC1Q9Y3T6 Y_RNA.607-201ENST00000410597 98 ntBASIC0.35□□□□□ -2.35
R3HCC1Q9Y3T6 AC097510.1-201ENST00000510945 133 ntBASIC0.35□□□□□ -2.35
R3HCC1Q9Y3T6 RNA5SP330-201ENST00000517096 96 ntBASIC0.35□□□□□ -2.35
R3HCC1Q9Y3T6 MIR3925-201ENST00000584674 77 ntBASIC0.35□□□□□ -2.35
R3HCC1Q9Y3T6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.35□□□□□ -2.35
R3HCC1Q9Y3T6 Y_RNA.30-201ENST00000362572 97 ntBASIC0.34□□□□□ -2.36
R3HCC1Q9Y3T6 SNORD77.2-201ENST00000391045 68 ntBASIC0.34□□□□□ -2.36
R3HCC1Q9Y3T6 RNU7-171P-201ENST00000459581 62 ntBASIC0.34□□□□□ -2.36
R3HCC1Q9Y3T6 MIR652-201ENST00000385278 98 ntBASIC0.33□□□□□ -2.36
R3HCC1Q9Y3T6 MIR4315-1-201ENST00000636800 73 ntBASIC0.33□□□□□ -2.36
R3HCC1Q9Y3T6 MIR4315-2-201ENST00000640925 73 ntBASIC0.33□□□□□ -2.36
R3HCC1Q9Y3T6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
R3HCC1Q9Y3T6 Y_RNA.115-201ENST00000363272 98 ntBASIC0.32□□□□□ -2.36
R3HCC1Q9Y3T6 RNU6-382P-201ENST00000365181 106 ntBASIC0.32□□□□□ -2.36
R3HCC1Q9Y3T6 RNU6-154P-201ENST00000384306 106 ntBASIC0.32□□□□□ -2.36
R3HCC1Q9Y3T6 MIR643-201ENST00000385267 97 ntBASIC0.32□□□□□ -2.36
R3HCC1Q9Y3T6 RNY4P29-201ENST00000410801 97 ntBASIC0.32□□□□□ -2.36
R3HCC1Q9Y3T6 RNU6-592P-201ENST00000411333 103 ntBASIC0.32□□□□□ -2.36
R3HCC1Q9Y3T6 RNU6-478P-201ENST00000363904 110 ntBASIC0.31□□□□□ -2.36
R3HCC1Q9Y3T6 RNU6-1276P-201ENST00000365372 104 ntBASIC0.31□□□□□ -2.36
R3HCC1Q9Y3T6 Y_RNA.388-201ENST00000383919 113 ntBASIC0.31□□□□□ -2.36
R3HCC1Q9Y3T6 SNORD75.2-201ENST00000408784 58 ntBASIC0.31□□□□□ -2.36
R3HCC1Q9Y3T6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.31□□□□□ -2.36
R3HCC1Q9Y3T6 MIR8087-201ENST00000612745 78 ntBASIC0.31□□□□□ -2.36
R3HCC1Q9Y3T6 RNU6-242P-201ENST00000384359 107 ntBASIC0.3□□□□□ -2.36
R3HCC1Q9Y3T6 RNU6-1152P-201ENST00000384576 107 ntBASIC0.3□□□□□ -2.36
R3HCC1Q9Y3T6 SNORA26.2-201ENST00000390922 122 ntBASIC0.3□□□□□ -2.36
R3HCC1Q9Y3T6 RNU7-24P-201ENST00000458867 62 ntBASIC0.3□□□□□ -2.36
R3HCC1Q9Y3T6 RNU6-782P-201ENST00000516852 104 ntBASIC0.3□□□□□ -2.36
R3HCC1Q9Y3T6 U6.81-201ENST00000612550 106 ntBASIC0.3□□□□□ -2.36
R3HCC1Q9Y3T6 AC084368.1-201ENST00000620935 65 ntBASIC0.3□□□□□ -2.36
R3HCC1Q9Y3T6 MIR924-201ENST00000638017 53 ntBASIC0.3□□□□□ -2.36
R3HCC1Q9Y3T6 MIR330-201ENST00000362196 94 ntBASIC0.29□□□□□ -2.36
R3HCC1Q9Y3T6 Y_RNA.371-201ENST00000365591 113 ntBASIC0.29□□□□□ -2.36
R3HCC1Q9Y3T6 Y_RNA.374-201ENST00000365606 101 ntBASIC0.29□□□□□ -2.36
R3HCC1Q9Y3T6 MIR1197-201ENST00000408818 88 ntBASIC0.29□□□□□ -2.36
R3HCC1Q9Y3T6 RNU6-557P-201ENST00000516842 110 ntBASIC0.29□□□□□ -2.36
R3HCC1Q9Y3T6 MIR5093-201ENST00000583199 100 ntBASIC0.29□□□□□ -2.36
R3HCC1Q9Y3T6 MIR4773-1-201ENST00000637203 78 ntBASIC0.29□□□□□ -2.36
R3HCC1Q9Y3T6 RNU6-129P-201ENST00000391022 107 ntBASIC0.28□□□□□ -2.36
R3HCC1Q9Y3T6 RNU7-188P-201ENST00000517063 64 ntBASIC0.28□□□□□ -2.36
R3HCC1Q9Y3T6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.28□□□□□ -2.36
R3HCC1Q9Y3T6 RNA5SP457-201ENST00000363657 124 ntBASIC0.27□□□□□ -2.37
R3HCC1Q9Y3T6 Y_RNA.316-201ENST00000365118 111 ntBASIC0.27□□□□□ -2.37
R3HCC1Q9Y3T6 RNU6-652P-201ENST00000365488 107 ntBASIC0.27□□□□□ -2.37
R3HCC1Q9Y3T6 MIR548H2-201ENST00000408874 88 ntBASIC0.27□□□□□ -2.37
R3HCC1Q9Y3T6 Y_RNA.606-201ENST00000410579 103 ntBASIC0.27□□□□□ -2.37
R3HCC1Q9Y3T6 SCARNA11.2-201ENST00000517183 154 ntBASIC0.27□□□□□ -2.37
R3HCC1Q9Y3T6 MIR4514-201ENST00000581410 57 ntBASIC0.27□□□□□ -2.37
R3HCC1Q9Y3T6 MIR2909-201ENST00000617113 69 ntBASIC0.27□□□□□ -2.37
R3HCC1Q9Y3T6 AL109933.3-201ENST00000619095 188 ntBASIC0.27□□□□□ -2.37
R3HCC1Q9Y3T6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
R3HCC1Q9Y3T6 Y_RNA.264-201ENST00000364665 102 ntBASIC0.26□□□□□ -2.37
R3HCC1Q9Y3T6 Y_RNA.660-201ENST00000516002 120 ntBASIC0.26□□□□□ -2.37
R3HCC1Q9Y3T6 SCARNA17.3-201ENST00000516381 125 ntBASIC0.26□□□□□ -2.37
R3HCC1Q9Y3T6 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.26□□□□□ -2.37
R3HCC1Q9Y3T6 Y_RNA.12-201ENST00000362393 112 ntBASIC0.25□□□□□ -2.37
R3HCC1Q9Y3T6 RNU6-340P-201ENST00000364005 107 ntBASIC0.25□□□□□ -2.37
R3HCC1Q9Y3T6 MIR876-201ENST00000401147 81 ntBASIC0.25□□□□□ -2.37
R3HCC1Q9Y3T6 SNORD114-4-201ENST00000363962 75 ntBASIC0.24□□□□□ -2.37
R3HCC1Q9Y3T6 RNA5SP173-201ENST00000364857 136 ntBASIC0.24□□□□□ -2.37
R3HCC1Q9Y3T6 RNU6-787P-201ENST00000384032 107 ntBASIC0.24□□□□□ -2.37
R3HCC1Q9Y3T6 YWHAEP3-201ENST00000582767 121 ntBASIC0.24□□□□□ -2.37
R3HCC1Q9Y3T6 AC104408.1-201ENST00000605241 170 ntBASIC0.24□□□□□ -2.37
R3HCC1Q9Y3T6 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
R3HCC1Q9Y3T6 RN7SL660P-201ENST00000614852 299 ntBASIC0.24□□□□□ -2.37
R3HCC1Q9Y3T6 RNU6-686P-201ENST00000364839 107 ntBASIC0.23□□□□□ -2.37
R3HCC1Q9Y3T6 RNU6-573P-201ENST00000383938 106 ntBASIC0.23□□□□□ -2.37
R3HCC1Q9Y3T6 MIR1302-4-201ENST00000408701 150 ntBASIC0.23□□□□□ -2.37
R3HCC1Q9Y3T6 SNORA62.5-201ENST00000516634 120 ntBASIC0.23□□□□□ -2.37
R3HCC1Q9Y3T6 MIR4666B-201ENST00000578142 81 ntBASIC0.23□□□□□ -2.37
R3HCC1Q9Y3T6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
R3HCC1Q9Y3T6 MIRLET7A1-201ENST00000362295 80 ntBASIC0.22□□□□□ -2.37
R3HCC1Q9Y3T6 SNORA42.1-201ENST00000363515 137 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms