Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.3□□□□□ -2.2
RTCBQ9Y3I0 U6.111-201ENST00000636093 83 ntBASIC1.3□□□□□ -2.2
RTCBQ9Y3I0 MIR18A-201ENST00000362310 71 ntBASIC1.29□□□□□ -2.2
RTCBQ9Y3I0 RNU1-141P-201ENST00000364623 158 ntBASIC1.29□□□□□ -2.2
RTCBQ9Y3I0 RNU4-45P-201ENST00000365469 141 ntBASIC1.29□□□□□ -2.2
RTCBQ9Y3I0 RNU6-604P-201ENST00000390917 100 ntBASIC1.29□□□□□ -2.2
RTCBQ9Y3I0 CYP3A137P-201ENST00000562436 69 ntBASIC1.29□□□□□ -2.2
RTCBQ9Y3I0 MIR3973-201ENST00000579824 107 ntBASIC1.29□□□□□ -2.2
RTCBQ9Y3I0 MIR6857-201ENST00000613267 93 ntBASIC1.29□□□□□ -2.2
RTCBQ9Y3I0 MIR6509-201ENST00000614603 85 ntBASIC1.29□□□□□ -2.2
RTCBQ9Y3I0 MIR6828-201ENST00000636181 60 ntBASIC1.29□□□□□ -2.2
RTCBQ9Y3I0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
RTCBQ9Y3I0 RNU4-38P-201ENST00000364472 129 ntBASIC1.28□□□□□ -2.2
RTCBQ9Y3I0 SNORA8.2-201ENST00000384372 139 ntBASIC1.28□□□□□ -2.2
RTCBQ9Y3I0 RNU6-269P-201ENST00000391077 97 ntBASIC1.28□□□□□ -2.2
RTCBQ9Y3I0 RNU6-881P-201ENST00000516813 102 ntBASIC1.28□□□□□ -2.2
RTCBQ9Y3I0 MIR532-201ENST00000385025 91 ntBASIC1.27□□□□□ -2.21
RTCBQ9Y3I0 AC125388.1-201ENST00000459631 156 ntBASIC1.27□□□□□ -2.21
RTCBQ9Y3I0 RN7SL793P-201ENST00000583259 296 ntBASIC1.27□□□□□ -2.21
RTCBQ9Y3I0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.26□□□□□ -2.21
RTCBQ9Y3I0 RNU6-800P-201ENST00000384473 103 ntBASIC1.26□□□□□ -2.21
RTCBQ9Y3I0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
RTCBQ9Y3I0 SNORD42B-201ENST00000458893 67 ntBASIC1.26□□□□□ -2.21
RTCBQ9Y3I0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.26□□□□□ -2.21
RTCBQ9Y3I0 SNORD113.1-201ENST00000363280 73 ntBASIC1.25□□□□□ -2.21
RTCBQ9Y3I0 RNA5SP227-201ENST00000516184 113 ntBASIC1.25□□□□□ -2.21
RTCBQ9Y3I0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.25□□□□□ -2.21
RTCBQ9Y3I0 AL162376.1-201ENST00000624117 175 ntBASIC1.25□□□□□ -2.21
RTCBQ9Y3I0 RNU6-1216P-201ENST00000362590 107 ntBASIC1.24□□□□□ -2.21
RTCBQ9Y3I0 Y_RNA.340-201ENST00000365330 92 ntBASIC1.24□□□□□ -2.21
RTCBQ9Y3I0 MIR203A-201ENST00000384836 110 ntBASIC1.23□□□□□ -2.21
RTCBQ9Y3I0 SNORA36.1-201ENST00000363424 132 ntBASIC1.22□□□□□ -2.21
RTCBQ9Y3I0 RNU6-260P-201ENST00000384092 107 ntBASIC1.22□□□□□ -2.21
RTCBQ9Y3I0 SNORD116-24-201ENST00000384549 92 ntBASIC1.22□□□□□ -2.21
RTCBQ9Y3I0 MIR216A-201ENST00000385063 110 ntBASIC1.22□□□□□ -2.21
RTCBQ9Y3I0 RNA5SP484-201ENST00000458857 111 ntBASIC1.22□□□□□ -2.21
RTCBQ9Y3I0 RNA5SP268-201ENST00000516828 124 ntBASIC1.22□□□□□ -2.21
RTCBQ9Y3I0 AC069503.3-201ENST00000618674 145 ntBASIC1.22□□□□□ -2.21
RTCBQ9Y3I0 RNU6-630P-201ENST00000391258 106 ntBASIC1.21□□□□□ -2.22
RTCBQ9Y3I0 RNA5SP94-201ENST00000516917 108 ntBASIC1.21□□□□□ -2.22
RTCBQ9Y3I0 MIR3657-201ENST00000584818 117 ntBASIC1.21□□□□□ -2.22
RTCBQ9Y3I0 AC005520.4-201ENST00000604337 90 ntBASIC1.21□□□□□ -2.22
RTCBQ9Y3I0 AL353765.1-201ENST00000605514 183 ntBASIC1.21□□□□□ -2.22
RTCBQ9Y3I0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RTCBQ9Y3I0 SNORD114-4-201ENST00000363962 75 ntBASIC1.2□□□□□ -2.22
RTCBQ9Y3I0 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
RTCBQ9Y3I0 RNA5SP222-201ENST00000411039 105 ntBASIC1.2□□□□□ -2.22
RTCBQ9Y3I0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.2□□□□□ -2.22
RTCBQ9Y3I0 RNU5B-6P-201ENST00000516765 68 ntBASIC1.2□□□□□ -2.22
RTCBQ9Y3I0 MIR4698-201ENST00000577795 80 ntBASIC1.19□□□□□ -2.22
RTCBQ9Y3I0 AC073869.9-201ENST00000641610 120 ntBASIC1.19□□□□□ -2.22
RTCBQ9Y3I0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
RTCBQ9Y3I0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
RTCBQ9Y3I0 Y_RNA.443-201ENST00000384135 111 ntBASIC1.18□□□□□ -2.22
RTCBQ9Y3I0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.18□□□□□ -2.22
RTCBQ9Y3I0 RNU6-982P-201ENST00000516216 102 ntBASIC1.18□□□□□ -2.22
RTCBQ9Y3I0 MIR4661-201ENST00000582720 75 ntBASIC1.18□□□□□ -2.22
RTCBQ9Y3I0 SNORA25.4-201ENST00000363666 124 ntBASIC1.17□□□□□ -2.22
RTCBQ9Y3I0 SNORA40.17-201ENST00000517256 115 ntBASIC1.17□□□□□ -2.22
RTCBQ9Y3I0 RNU6-471P-201ENST00000383944 106 ntBASIC1.16□□□□□ -2.22
RTCBQ9Y3I0 AC018659.1-201ENST00000551083 169 ntBASIC1.16□□□□□ -2.22
RTCBQ9Y3I0 AL109933.3-201ENST00000619095 188 ntBASIC1.16□□□□□ -2.22
RTCBQ9Y3I0 SNORA2.1-201ENST00000363089 137 ntBASIC1.15□□□□□ -2.23
RTCBQ9Y3I0 MTND4LP1-201ENST00000446263 157 ntBASIC1.15□□□□□ -2.23
RTCBQ9Y3I0 MIR7107-201ENST00000611489 80 ntBASIC1.15□□□□□ -2.23
RTCBQ9Y3I0 RNU6-990P-201ENST00000364385 104 ntBASIC1.14□□□□□ -2.23
RTCBQ9Y3I0 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
RTCBQ9Y3I0 MIR4714-201ENST00000580728 77 ntBASIC1.14□□□□□ -2.23
RTCBQ9Y3I0 AC006210.1-201ENST00000424882 111 ntBASIC1.13□□□□□ -2.23
RTCBQ9Y3I0 SNORD110-201ENST00000408189 75 ntBASIC1.12□□□□□ -2.23
RTCBQ9Y3I0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.12□□□□□ -2.23
RTCBQ9Y3I0 Y_RNA.374-201ENST00000365606 101 ntBASIC1.11□□□□□ -2.23
RTCBQ9Y3I0 Y_RNA.407-201ENST00000383986 113 ntBASIC1.11□□□□□ -2.23
RTCBQ9Y3I0 SNORA36.2-201ENST00000384004 127 ntBASIC1.11□□□□□ -2.23
RTCBQ9Y3I0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
RTCBQ9Y3I0 RNU6-668P-201ENST00000364180 107 ntBASIC1.1□□□□□ -2.23
RTCBQ9Y3I0 RNU6-645P-201ENST00000364649 106 ntBASIC1.1□□□□□ -2.23
RTCBQ9Y3I0 MIR9-2-201ENST00000384838 87 ntBASIC1.1□□□□□ -2.23
RTCBQ9Y3I0 RNA5SP147-201ENST00000516493 109 ntBASIC1.1□□□□□ -2.23
RTCBQ9Y3I0 Y_RNA.250-201ENST00000364542 110 ntBASIC1.09□□□□□ -2.23
RTCBQ9Y3I0 MIR608-201ENST00000384820 100 ntBASIC1.08□□□□□ -2.24
RTCBQ9Y3I0 MIR140-201ENST00000385282 100 ntBASIC1.08□□□□□ -2.24
RTCBQ9Y3I0 MIR6739-201ENST00000622461 75 ntBASIC1.08□□□□□ -2.24
RTCBQ9Y3I0 RNA5SP517-201ENST00000364724 117 ntBASIC1.07□□□□□ -2.24
RTCBQ9Y3I0 RNU6-1187P-201ENST00000364771 110 ntBASIC1.07□□□□□ -2.24
RTCBQ9Y3I0 RNY1P8-201ENST00000383970 114 ntBASIC1.07□□□□□ -2.24
RTCBQ9Y3I0 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
RTCBQ9Y3I0 MIR6513-201ENST00000621188 64 ntBASIC1.07□□□□□ -2.24
RTCBQ9Y3I0 SCARNA17.3-201ENST00000516381 125 ntBASIC1.06□□□□□ -2.24
RTCBQ9Y3I0 MIR4473-201ENST00000583731 91 ntBASIC1.06□□□□□ -2.24
RTCBQ9Y3I0 AC103706.3-201ENST00000636297 85 ntBASIC1.06□□□□□ -2.24
RTCBQ9Y3I0 MIR193B-201ENST00000384907 83 ntBASIC1.05□□□□□ -2.24
RTCBQ9Y3I0 MIR652-201ENST00000385278 98 ntBASIC1.05□□□□□ -2.24
RTCBQ9Y3I0 MIR4752-201ENST00000579672 72 ntBASIC1.05□□□□□ -2.24
RTCBQ9Y3I0 MIR4511-201ENST00000582784 87 ntBASIC1.05□□□□□ -2.24
RTCBQ9Y3I0 SNORA70.25-201ENST00000612741 95 ntBASIC1.05□□□□□ -2.24
RTCBQ9Y3I0 AC092634.7-201ENST00000621022 103 ntBASIC1.05□□□□□ -2.24
RTCBQ9Y3I0 MIR548AE1-201ENST00000583292 70 ntBASIC1.04□□□□□ -2.24
RTCBQ9Y3I0 RNU6-1162P-201ENST00000384443 104 ntBASIC1.03□□□□□ -2.24
RTCBQ9Y3I0 RNU6-656P-201ENST00000516785 107 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms