Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.56□□□□□ -2.5
FOXA2Q9Y261 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.56□□□□□ -2.5
FOXA2Q9Y261 SNORD116-21-201ENST00000384507 92 ntBASIC-0.56□□□□□ -2.5
FOXA2Q9Y261 MIR548I1-201ENST00000408810 149 ntBASIC-0.56□□□□□ -2.5
FOXA2Q9Y261 AC097510.1-201ENST00000510945 133 ntBASIC-0.56□□□□□ -2.5
FOXA2Q9Y261 MIR3671-201ENST00000580455 88 ntBASIC-0.56□□□□□ -2.5
FOXA2Q9Y261 MIR3133-201ENST00000583157 78 ntBASIC-0.56□□□□□ -2.5
FOXA2Q9Y261 RNU6-495P-201ENST00000362995 107 ntBASIC-0.57□□□□□ -2.5
FOXA2Q9Y261 MIR196A1-201ENST00000388006 70 ntBASIC-0.57□□□□□ -2.5
FOXA2Q9Y261 RNU6-721P-201ENST00000410155 105 ntBASIC-0.57□□□□□ -2.5
FOXA2Q9Y261 RNA5SP451-201ENST00000410588 110 ntBASIC-0.57□□□□□ -2.5
FOXA2Q9Y261 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.57□□□□□ -2.5
FOXA2Q9Y261 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.57□□□□□ -2.5
FOXA2Q9Y261 RNU6-502P-201ENST00000362419 108 ntBASIC-0.58□□□□□ -2.5
FOXA2Q9Y261 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.58□□□□□ -2.5
FOXA2Q9Y261 MIR204-201ENST00000385200 110 ntBASIC-0.58□□□□□ -2.5
FOXA2Q9Y261 RNU4-63P-201ENST00000411313 118 ntBASIC-0.58□□□□□ -2.5
FOXA2Q9Y261 SCARNA23-201ENST00000516060 130 ntBASIC-0.58□□□□□ -2.5
FOXA2Q9Y261 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 RNU6-704P-201ENST00000364162 103 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 RNU6-973P-201ENST00000364690 107 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 RNY4P3-201ENST00000365254 95 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 SNORA24B-201ENST00000384176 131 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 RNU6-476P-201ENST00000384726 107 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 RNA5SP292-201ENST00000390974 118 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 RNU6-972P-201ENST00000391208 107 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 SNORA19.1-201ENST00000410656 129 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 RNU6-904P-201ENST00000516206 101 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 RNU6-62P-201ENST00000516526 102 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 SNORD38.3-201ENST00000516599 73 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 MIR6851-201ENST00000617060 67 ntBASIC-0.59□□□□□ -2.5
FOXA2Q9Y261 SNORD58A-201ENST00000383875 65 ntBASIC-0.6□□□□□ -2.51
FOXA2Q9Y261 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.6□□□□□ -2.51
FOXA2Q9Y261 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.6□□□□□ -2.51
FOXA2Q9Y261 RNU6-774P-201ENST00000363238 107 ntBASIC-0.61□□□□□ -2.51
FOXA2Q9Y261 SNORD114-25-201ENST00000363742 72 ntBASIC-0.61□□□□□ -2.51
FOXA2Q9Y261 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.61□□□□□ -2.51
FOXA2Q9Y261 MIR604-201ENST00000384880 94 ntBASIC-0.61□□□□□ -2.51
FOXA2Q9Y261 RNU6-887P-201ENST00000410660 100 ntBASIC-0.61□□□□□ -2.51
FOXA2Q9Y261 RNU7-24P-201ENST00000458867 62 ntBASIC-0.61□□□□□ -2.51
FOXA2Q9Y261 SNORA18.5-201ENST00000516616 101 ntBASIC-0.61□□□□□ -2.51
FOXA2Q9Y261 MIR3668-201ENST00000582138 75 ntBASIC-0.61□□□□□ -2.51
FOXA2Q9Y261 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.61□□□□□ -2.51
FOXA2Q9Y261 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.61□□□□□ -2.51
FOXA2Q9Y261 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.62□□□□□ -2.51
FOXA2Q9Y261 SNORA63.6-201ENST00000364921 119 ntBASIC-0.62□□□□□ -2.51
FOXA2Q9Y261 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.62□□□□□ -2.51
FOXA2Q9Y261 RNU6-746P-201ENST00000384112 109 ntBASIC-0.62□□□□□ -2.51
FOXA2Q9Y261 MIR224-201ENST00000384889 81 ntBASIC-0.62□□□□□ -2.51
FOXA2Q9Y261 SNORD75.2-201ENST00000408784 58 ntBASIC-0.62□□□□□ -2.51
FOXA2Q9Y261 MTATP6P29-201ENST00000415057 132 ntBASIC-0.62□□□□□ -2.51
FOXA2Q9Y261 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.62□□□□□ -2.51
FOXA2Q9Y261 SCARNA17-201ENST00000516183 144 ntBASIC-0.62□□□□□ -2.51
FOXA2Q9Y261 SNORD90-201ENST00000391145 111 ntBASIC-0.63□□□□□ -2.51
FOXA2Q9Y261 RNU6-881P-201ENST00000516813 102 ntBASIC-0.63□□□□□ -2.51
FOXA2Q9Y261 MIR6773-201ENST00000612812 74 ntBASIC-0.63□□□□□ -2.51
FOXA2Q9Y261 RNU4-32P-201ENST00000363404 141 ntBASIC-0.64□□□□□ -2.51
FOXA2Q9Y261 RNU6-990P-201ENST00000364385 104 ntBASIC-0.64□□□□□ -2.51
FOXA2Q9Y261 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.64□□□□□ -2.51
FOXA2Q9Y261 RNU6-959P-201ENST00000384671 107 ntBASIC-0.64□□□□□ -2.51
FOXA2Q9Y261 RNY1P7-201ENST00000384743 110 ntBASIC-0.64□□□□□ -2.51
FOXA2Q9Y261 SNORA13-201ENST00000458790 133 ntBASIC-0.64□□□□□ -2.51
FOXA2Q9Y261 AC021146.6-201ENST00000514659 117 ntBASIC-0.64□□□□□ -2.51
FOXA2Q9Y261 RNU6-758P-201ENST00000516292 89 ntBASIC-0.64□□□□□ -2.51
FOXA2Q9Y261 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.65□□□□□ -2.51
FOXA2Q9Y261 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.65□□□□□ -2.51
FOXA2Q9Y261 RNU6-35P-201ENST00000384530 107 ntBASIC-0.65□□□□□ -2.51
FOXA2Q9Y261 MIR1302-5-201ENST00000408164 150 ntBASIC-0.65□□□□□ -2.51
FOXA2Q9Y261 MIR5704-201ENST00000584029 77 ntBASIC-0.65□□□□□ -2.51
FOXA2Q9Y261 MIR8068-201ENST00000618032 68 ntBASIC-0.65□□□□□ -2.51
FOXA2Q9Y261 snoR1.1-201ENST00000628177 80 ntBASIC-0.65□□□□□ -2.51
FOXA2Q9Y261 SNORD116-10-201ENST00000363791 102 ntBASIC-0.66□□□□□ -2.52
FOXA2Q9Y261 RNU6-431P-201ENST00000383874 107 ntBASIC-0.66□□□□□ -2.52
FOXA2Q9Y261 MIR518B-201ENST00000385127 83 ntBASIC-0.66□□□□□ -2.52
FOXA2Q9Y261 RNU6-337P-201ENST00000391243 106 ntBASIC-0.66□□□□□ -2.52
FOXA2Q9Y261 MIR1265-201ENST00000408444 86 ntBASIC-0.66□□□□□ -2.52
FOXA2Q9Y261 Z95118.1-201ENST00000421372 247 ntBASIC-0.66□□□□□ -2.52
FOXA2Q9Y261 AC008267.6-201ENST00000441664 139 ntBASIC-0.66□□□□□ -2.52
FOXA2Q9Y261 RNU6-537P-201ENST00000517277 103 ntBASIC-0.66□□□□□ -2.52
FOXA2Q9Y261 AC026421.1-201ENST00000519101 163 ntBASIC-0.66□□□□□ -2.52
FOXA2Q9Y261 MIR4499-201ENST00000584834 69 ntBASIC-0.66□□□□□ -2.52
FOXA2Q9Y261 AC006254.2-201ENST00000603259 279 ntBASIC-0.66□□□□□ -2.52
FOXA2Q9Y261 MIR6854-201ENST00000614935 69 ntBASIC-0.66□□□□□ -2.52
FOXA2Q9Y261 RNA5SP368-201ENST00000364298 116 ntBASIC-0.67□□□□□ -2.52
FOXA2Q9Y261 MIR590-201ENST00000385008 97 ntBASIC-0.67□□□□□ -2.52
FOXA2Q9Y261 MIRLET7B-201ENST00000385140 83 ntBASIC-0.67□□□□□ -2.52
FOXA2Q9Y261 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
FOXA2Q9Y261 AC021146.9-201ENST00000512503 156 ntBASIC-0.67□□□□□ -2.52
FOXA2Q9Y261 AC108676.2-201ENST00000605225 163 ntBASIC-0.67□□□□□ -2.52
FOXA2Q9Y261 RNU5F-1-201ENST00000362507 117 ntBASIC-0.68□□□□□ -2.52
FOXA2Q9Y261 RNU6-382P-201ENST00000365181 106 ntBASIC-0.68□□□□□ -2.52
FOXA2Q9Y261 RNU7-61P-201ENST00000515897 61 ntBASIC-0.68□□□□□ -2.52
FOXA2Q9Y261 RNA5SP470-201ENST00000516463 106 ntBASIC-0.68□□□□□ -2.52
FOXA2Q9Y261 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 SNORD115-23-201ENST00000364461 82 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 278.9 ms