Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 SNORA15B-2-201ENST00000384058 135 ntBASIC2.03□□□□□ -2.08
HPS5Q9UPZ3 SNORA15B-1-201ENST00000384334 135 ntBASIC2.03□□□□□ -2.08
HPS5Q9UPZ3 RNU6-35P-201ENST00000384530 107 ntBASIC2.03□□□□□ -2.08
HPS5Q9UPZ3 RNU5B-6P-201ENST00000516765 68 ntBASIC2.03□□□□□ -2.08
HPS5Q9UPZ3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.03□□□□□ -2.08
HPS5Q9UPZ3 RNU6-726P-201ENST00000364680 107 ntBASIC2.02□□□□□ -2.09
HPS5Q9UPZ3 SNORA33.1-201ENST00000364957 130 ntBASIC2.02□□□□□ -2.09
HPS5Q9UPZ3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HPS5Q9UPZ3 MIR548L-201ENST00000408303 86 ntBASIC2.02□□□□□ -2.09
HPS5Q9UPZ3 Y_RNA.125-201ENST00000363371 111 ntBASIC2.01□□□□□ -2.09
HPS5Q9UPZ3 SNORA41B-201ENST00000384785 128 ntBASIC2.01□□□□□ -2.09
HPS5Q9UPZ3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2□□□□□ -2.09
HPS5Q9UPZ3 RNU6-231P-201ENST00000517122 103 ntBASIC2□□□□□ -2.09
HPS5Q9UPZ3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2□□□□□ -2.09
HPS5Q9UPZ3 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
HPS5Q9UPZ3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.99□□□□□ -2.09
HPS5Q9UPZ3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HPS5Q9UPZ3 RNU1-78P-201ENST00000391248 165 ntBASIC1.98□□□□□ -2.09
HPS5Q9UPZ3 RNU6-469P-201ENST00000516253 101 ntBASIC1.98□□□□□ -2.09
HPS5Q9UPZ3 MIR4285-201ENST00000581001 85 ntBASIC1.98□□□□□ -2.09
HPS5Q9UPZ3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HPS5Q9UPZ3 RNU1-42P-201ENST00000364033 160 ntBASIC1.97□□□□□ -2.09
HPS5Q9UPZ3 Y_RNA.246-201ENST00000364495 108 ntBASIC1.97□□□□□ -2.09
HPS5Q9UPZ3 Y_RNA.325-201ENST00000365171 122 ntBASIC1.97□□□□□ -2.09
HPS5Q9UPZ3 SNORA8.2-201ENST00000384372 139 ntBASIC1.97□□□□□ -2.09
HPS5Q9UPZ3 MIR758-201ENST00000390227 88 ntBASIC1.97□□□□□ -2.09
HPS5Q9UPZ3 RNU6-269P-201ENST00000391077 97 ntBASIC1.97□□□□□ -2.09
HPS5Q9UPZ3 RNA5SP47-201ENST00000517230 109 ntBASIC1.97□□□□□ -2.09
HPS5Q9UPZ3 MIR3198-2-201ENST00000577868 80 ntBASIC1.97□□□□□ -2.09
HPS5Q9UPZ3 RNU4-33P-201ENST00000364316 85 ntBASIC1.96□□□□□ -2.1
HPS5Q9UPZ3 RNU6-930P-201ENST00000390938 100 ntBASIC1.96□□□□□ -2.1
HPS5Q9UPZ3 SNORD53B-201ENST00000577887 78 ntBASIC1.96□□□□□ -2.1
HPS5Q9UPZ3 SNORD18A-201ENST00000363753 72 ntBASIC1.95□□□□□ -2.1
HPS5Q9UPZ3 SNORA63.6-201ENST00000364921 119 ntBASIC1.95□□□□□ -2.1
HPS5Q9UPZ3 RNU6-716P-201ENST00000365621 103 ntBASIC1.95□□□□□ -2.1
HPS5Q9UPZ3 MIR598-201ENST00000384868 97 ntBASIC1.95□□□□□ -2.1
HPS5Q9UPZ3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HPS5Q9UPZ3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HPS5Q9UPZ3 RNA5SP484-201ENST00000458857 111 ntBASIC1.94□□□□□ -2.1
HPS5Q9UPZ3 MIR4422-201ENST00000581938 83 ntBASIC1.94□□□□□ -2.1
HPS5Q9UPZ3 Y_RNA.178-201ENST00000363832 102 ntBASIC1.93□□□□□ -2.1
HPS5Q9UPZ3 MIR517C-201ENST00000385103 95 ntBASIC1.93□□□□□ -2.1
HPS5Q9UPZ3 MIR96-201ENST00000362288 78 ntBASIC1.92□□□□□ -2.1
HPS5Q9UPZ3 RNU6-1246P-201ENST00000391064 107 ntBASIC1.92□□□□□ -2.1
HPS5Q9UPZ3 SCARNA17.3-201ENST00000516381 125 ntBASIC1.92□□□□□ -2.1
HPS5Q9UPZ3 MIR4421-201ENST00000578133 69 ntBASIC1.92□□□□□ -2.1
HPS5Q9UPZ3 MIR548F3-201ENST00000408509 87 ntBASIC1.91□□□□□ -2.1
HPS5Q9UPZ3 SNORA40.16-201ENST00000517238 121 ntBASIC1.91□□□□□ -2.1
HPS5Q9UPZ3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.91□□□□□ -2.1
HPS5Q9UPZ3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HPS5Q9UPZ3 SNORA9.1-201ENST00000362412 131 ntBASIC1.9□□□□□ -2.11
HPS5Q9UPZ3 SNORD12-201ENST00000391002 90 ntBASIC1.9□□□□□ -2.11
HPS5Q9UPZ3 SNORA25.8-201ENST00000364831 128 ntBASIC1.89□□□□□ -2.11
HPS5Q9UPZ3 SNORD116-16-201ENST00000384533 92 ntBASIC1.89□□□□□ -2.11
HPS5Q9UPZ3 MIR652-201ENST00000385278 98 ntBASIC1.89□□□□□ -2.11
HPS5Q9UPZ3 SNORD116.2-201ENST00000391251 93 ntBASIC1.89□□□□□ -2.11
HPS5Q9UPZ3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.89□□□□□ -2.11
HPS5Q9UPZ3 RNU1-92P-201ENST00000517017 135 ntBASIC1.89□□□□□ -2.11
HPS5Q9UPZ3 SNORA70.22-201ENST00000517160 124 ntBASIC1.89□□□□□ -2.11
HPS5Q9UPZ3 MIR582-201ENST00000365731 98 ntBASIC1.88□□□□□ -2.11
HPS5Q9UPZ3 Y_RNA.407-201ENST00000383986 113 ntBASIC1.88□□□□□ -2.11
HPS5Q9UPZ3 MIR548E-201ENST00000408287 88 ntBASIC1.88□□□□□ -2.11
HPS5Q9UPZ3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.88□□□□□ -2.11
HPS5Q9UPZ3 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
HPS5Q9UPZ3 AL162376.1-201ENST00000624117 175 ntBASIC1.88□□□□□ -2.11
HPS5Q9UPZ3 SNORA67.6-201ENST00000391093 99 ntBASIC1.87□□□□□ -2.11
HPS5Q9UPZ3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.87□□□□□ -2.11
HPS5Q9UPZ3 MIR548X-201ENST00000580069 75 ntBASIC1.87□□□□□ -2.11
HPS5Q9UPZ3 Y_RNA.30-201ENST00000362572 97 ntBASIC1.86□□□□□ -2.11
HPS5Q9UPZ3 RNA5SP363-201ENST00000365072 115 ntBASIC1.86□□□□□ -2.11
HPS5Q9UPZ3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.86□□□□□ -2.11
HPS5Q9UPZ3 CYP3A54P-201ENST00000566950 75 ntBASIC1.86□□□□□ -2.11
HPS5Q9UPZ3 AL353770.2-201ENST00000620024 78 ntBASIC1.86□□□□□ -2.11
HPS5Q9UPZ3 Y_RNA.74-201ENST00000362911 99 ntBASIC1.85□□□□□ -2.11
HPS5Q9UPZ3 RNU1-93P-201ENST00000364704 169 ntBASIC1.85□□□□□ -2.11
HPS5Q9UPZ3 SNORD105-201ENST00000386910 85 ntBASIC1.85□□□□□ -2.11
HPS5Q9UPZ3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HPS5Q9UPZ3 AC002429.1-201ENST00000437672 148 ntBASIC1.85□□□□□ -2.11
HPS5Q9UPZ3 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
HPS5Q9UPZ3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.85□□□□□ -2.11
HPS5Q9UPZ3 MIR3678-201ENST00000578455 94 ntBASIC1.85□□□□□ -2.11
HPS5Q9UPZ3 MIR7110-201ENST00000612638 86 ntBASIC1.85□□□□□ -2.11
HPS5Q9UPZ3 AL021921.1-201ENST00000442774 93 ntBASIC1.84□□□□□ -2.11
HPS5Q9UPZ3 U7.7-201ENST00000459276 60 ntBASIC1.84□□□□□ -2.11
HPS5Q9UPZ3 MIR548AE1-201ENST00000583292 70 ntBASIC1.84□□□□□ -2.11
HPS5Q9UPZ3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
HPS5Q9UPZ3 MIR520E-201ENST00000384867 87 ntBASIC1.83□□□□□ -2.12
HPS5Q9UPZ3 SNORD89-201ENST00000390981 114 ntBASIC1.83□□□□□ -2.12
HPS5Q9UPZ3 MIR1323-201ENST00000408090 73 ntBASIC1.83□□□□□ -2.12
HPS5Q9UPZ3 RPS29P1-201ENST00000465274 159 ntBASIC1.83□□□□□ -2.12
HPS5Q9UPZ3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HPS5Q9UPZ3 SNORA40B-201ENST00000385573 128 ntBASIC1.81□□□□□ -2.12
HPS5Q9UPZ3 MIR6078-201ENST00000611069 100 ntBASIC1.81□□□□□ -2.12
HPS5Q9UPZ3 MIR6828-201ENST00000636181 60 ntBASIC1.81□□□□□ -2.12
HPS5Q9UPZ3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HPS5Q9UPZ3 Y_RNA.282-201ENST00000364793 102 ntBASIC1.8□□□□□ -2.12
HPS5Q9UPZ3 MIR320A-201ENST00000385302 82 ntBASIC1.8□□□□□ -2.12
HPS5Q9UPZ3 MIR151B-201ENST00000584249 96 ntBASIC1.8□□□□□ -2.12
HPS5Q9UPZ3 U6.96-201ENST00000636425 70 ntBASIC1.8□□□□□ -2.12
HPS5Q9UPZ3 MIR222-201ENST00000384992 110 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 281.6 ms