Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 MIR548O2-201ENST00000616090 70 ntBASIC0.74□□□□□ -2.29
DENND2AQ9ULE3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
DENND2AQ9ULE3 RNU6-1177P-201ENST00000391058 104 ntBASIC0.73□□□□□ -2.29
DENND2AQ9ULE3 SNORD71-201ENST00000411292 86 ntBASIC0.73□□□□□ -2.29
DENND2AQ9ULE3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.73□□□□□ -2.29
DENND2AQ9ULE3 SNORA25.18-201ENST00000607153 114 ntBASIC0.73□□□□□ -2.29
DENND2AQ9ULE3 SNORD118-201ENST00000363593 134 ntBASIC0.72□□□□□ -2.29
DENND2AQ9ULE3 RNU6-824P-201ENST00000363724 104 ntBASIC0.72□□□□□ -2.29
DENND2AQ9ULE3 RNU2-59P-201ENST00000410482 191 ntBASIC0.72□□□□□ -2.29
DENND2AQ9ULE3 SNORA40.8-201ENST00000411034 126 ntBASIC0.72□□□□□ -2.29
DENND2AQ9ULE3 AC098934.3-201ENST00000430450 190 ntBASIC0.72□□□□□ -2.29
DENND2AQ9ULE3 AC097510.1-201ENST00000510945 133 ntBASIC0.72□□□□□ -2.29
DENND2AQ9ULE3 MIR4460-201ENST00000577862 86 ntBASIC0.72□□□□□ -2.29
DENND2AQ9ULE3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
DENND2AQ9ULE3 Y_RNA.12-201ENST00000362393 112 ntBASIC0.71□□□□□ -2.3
DENND2AQ9ULE3 RNA5SP347-201ENST00000362445 119 ntBASIC0.71□□□□□ -2.3
DENND2AQ9ULE3 MT-TY-201ENST00000387409 66 ntBASIC0.71□□□□□ -2.3
DENND2AQ9ULE3 RNA5SP193-201ENST00000410353 107 ntBASIC0.71□□□□□ -2.3
DENND2AQ9ULE3 YWHAEP2-201ENST00000580066 112 ntBASIC0.71□□□□□ -2.3
DENND2AQ9ULE3 YWHAEP3-201ENST00000582767 121 ntBASIC0.71□□□□□ -2.3
DENND2AQ9ULE3 Y_RNA.371-201ENST00000365591 113 ntBASIC0.7□□□□□ -2.3
DENND2AQ9ULE3 RNU6V-201ENST00000384105 107 ntBASIC0.7□□□□□ -2.3
DENND2AQ9ULE3 RNU6-24P-201ENST00000384440 107 ntBASIC0.7□□□□□ -2.3
DENND2AQ9ULE3 AC069271.1-201ENST00000445577 156 ntBASIC0.7□□□□□ -2.3
DENND2AQ9ULE3 NAMPTP3-201ENST00000569273 224 ntBASIC0.7□□□□□ -2.3
DENND2AQ9ULE3 MIR4711-201ENST00000578274 70 ntBASIC0.7□□□□□ -2.3
DENND2AQ9ULE3 MIR4752-201ENST00000579672 72 ntBASIC0.7□□□□□ -2.3
DENND2AQ9ULE3 AC073869.9-201ENST00000641610 120 ntBASIC0.7□□□□□ -2.3
DENND2AQ9ULE3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
DENND2AQ9ULE3 RNU6-1094P-201ENST00000362416 104 ntBASIC0.69□□□□□ -2.3
DENND2AQ9ULE3 RNU6-340P-201ENST00000364005 107 ntBASIC0.69□□□□□ -2.3
DENND2AQ9ULE3 RNU6-54P-201ENST00000365563 107 ntBASIC0.69□□□□□ -2.3
DENND2AQ9ULE3 Y_RNA.532-201ENST00000384590 113 ntBASIC0.69□□□□□ -2.3
DENND2AQ9ULE3 RNU6-380P-201ENST00000410207 107 ntBASIC0.69□□□□□ -2.3
DENND2AQ9ULE3 U6.81-201ENST00000612550 106 ntBASIC0.69□□□□□ -2.3
DENND2AQ9ULE3 MIR518A1-201ENST00000385068 85 ntBASIC0.68□□□□□ -2.3
DENND2AQ9ULE3 Y_RNA.606-201ENST00000410579 103 ntBASIC0.68□□□□□ -2.3
DENND2AQ9ULE3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.68□□□□□ -2.3
DENND2AQ9ULE3 RNU4-54P-201ENST00000516428 129 ntBASIC0.68□□□□□ -2.3
DENND2AQ9ULE3 RNU6-638P-201ENST00000516582 104 ntBASIC0.68□□□□□ -2.3
DENND2AQ9ULE3 AC243829.3-201ENST00000622177 108 ntBASIC0.68□□□□□ -2.3
DENND2AQ9ULE3 RNU6-945P-201ENST00000383947 107 ntBASIC0.67□□□□□ -2.3
DENND2AQ9ULE3 RNU6-303P-201ENST00000517091 106 ntBASIC0.67□□□□□ -2.3
DENND2AQ9ULE3 AC018659.1-201ENST00000551083 169 ntBASIC0.67□□□□□ -2.3
DENND2AQ9ULE3 RNU1-29P-201ENST00000606574 126 ntBASIC0.67□□□□□ -2.3
DENND2AQ9ULE3 SNORA70.25-201ENST00000612741 95 ntBASIC0.67□□□□□ -2.3
DENND2AQ9ULE3 AC069503.3-201ENST00000618674 145 ntBASIC0.67□□□□□ -2.3
DENND2AQ9ULE3 MIR5087-201ENST00000635826 76 ntBASIC0.67□□□□□ -2.3
DENND2AQ9ULE3 RNU6-382P-201ENST00000365181 106 ntBASIC0.66□□□□□ -2.3
DENND2AQ9ULE3 SNORD110-201ENST00000408189 75 ntBASIC0.66□□□□□ -2.3
DENND2AQ9ULE3 AC006210.1-201ENST00000424882 111 ntBASIC0.66□□□□□ -2.3
DENND2AQ9ULE3 RNU5B-6P-201ENST00000516765 68 ntBASIC0.66□□□□□ -2.3
DENND2AQ9ULE3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
DENND2AQ9ULE3 RNU6-495P-201ENST00000362995 107 ntBASIC0.65□□□□□ -2.31
DENND2AQ9ULE3 Y_RNA.244-201ENST00000364484 109 ntBASIC0.65□□□□□ -2.31
DENND2AQ9ULE3 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.31
DENND2AQ9ULE3 MIR4484-201ENST00000582855 83 ntBASIC0.65□□□□□ -2.31
DENND2AQ9ULE3 MIR4773-1-201ENST00000637203 78 ntBASIC0.65□□□□□ -2.31
DENND2AQ9ULE3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.65□□□□□ -2.31
DENND2AQ9ULE3 SNORD75.2-201ENST00000408784 58 ntBASIC0.64□□□□□ -2.31
DENND2AQ9ULE3 AC074348.1-201ENST00000426503 132 ntBASIC0.64□□□□□ -2.31
DENND2AQ9ULE3 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.64□□□□□ -2.31
DENND2AQ9ULE3 MIR1297-201ENST00000637311 77 ntBASIC0.64□□□□□ -2.31
DENND2AQ9ULE3 MIR6086-201ENST00000638065 55 ntBASIC0.64□□□□□ -2.31
DENND2AQ9ULE3 RNU6-681P-201ENST00000364012 104 ntBASIC0.63□□□□□ -2.31
DENND2AQ9ULE3 RNU7-24P-201ENST00000458867 62 ntBASIC0.63□□□□□ -2.31
DENND2AQ9ULE3 SNORD42B-201ENST00000458893 67 ntBASIC0.63□□□□□ -2.31
DENND2AQ9ULE3 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
DENND2AQ9ULE3 RNU6-807P-201ENST00000516805 107 ntBASIC0.63□□□□□ -2.31
DENND2AQ9ULE3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
DENND2AQ9ULE3 AL157398.1-201ENST00000452981 186 ntBASIC0.62□□□□□ -2.31
DENND2AQ9ULE3 SCARNA18B-201ENST00000458806 135 ntBASIC0.62□□□□□ -2.31
DENND2AQ9ULE3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.61□□□□□ -2.31
DENND2AQ9ULE3 RNU6-154P-201ENST00000384306 106 ntBASIC0.61□□□□□ -2.31
DENND2AQ9ULE3 RNU6-274P-201ENST00000459566 107 ntBASIC0.61□□□□□ -2.31
DENND2AQ9ULE3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
DENND2AQ9ULE3 RNU6-330P-201ENST00000363015 107 ntBASIC0.6□□□□□ -2.31
DENND2AQ9ULE3 MIR5706-201ENST00000579841 80 ntBASIC0.6□□□□□ -2.31
DENND2AQ9ULE3 MIR6755-201ENST00000619993 66 ntBASIC0.6□□□□□ -2.31
DENND2AQ9ULE3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.6□□□□□ -2.31
DENND2AQ9ULE3 Y_RNA.788-201ENST00000622394 112 ntBASIC0.6□□□□□ -2.31
DENND2AQ9ULE3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
DENND2AQ9ULE3 SNORA2A-201ENST00000383885 135 ntBASIC0.59□□□□□ -2.31
DENND2AQ9ULE3 MIR4473-201ENST00000583731 91 ntBASIC0.59□□□□□ -2.31
DENND2AQ9ULE3 AC145423.2-201ENST00000610631 239 ntBASIC0.59□□□□□ -2.31
DENND2AQ9ULE3 AC114737.2-201ENST00000421583 173 ntBASIC0.58□□□□□ -2.32
DENND2AQ9ULE3 HMGN2P22-201ENST00000427588 175 ntBASIC0.58□□□□□ -2.32
DENND2AQ9ULE3 RNA5SP285-201ENST00000516619 119 ntBASIC0.58□□□□□ -2.32
DENND2AQ9ULE3 SNORA62.5-201ENST00000516634 120 ntBASIC0.58□□□□□ -2.32
DENND2AQ9ULE3 U7.4-201ENST00000614961 63 ntBASIC0.58□□□□□ -2.32
DENND2AQ9ULE3 MIR2909-201ENST00000617113 69 ntBASIC0.58□□□□□ -2.32
DENND2AQ9ULE3 SNORD44.1-201ENST00000363202 61 ntBASIC0.57□□□□□ -2.32
DENND2AQ9ULE3 SNORA68.3-201ENST00000515906 83 ntBASIC0.57□□□□□ -2.32
DENND2AQ9ULE3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.57□□□□□ -2.32
DENND2AQ9ULE3 MIR548AE1-201ENST00000583292 70 ntBASIC0.57□□□□□ -2.32
DENND2AQ9ULE3 RNU6-1039P-201ENST00000383931 107 ntBASIC0.56□□□□□ -2.32
DENND2AQ9ULE3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.56□□□□□ -2.32
DENND2AQ9ULE3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.56□□□□□ -2.32
DENND2AQ9ULE3 AL691482.2-201ENST00000457453 84 ntBASIC0.56□□□□□ -2.32
DENND2AQ9ULE3 RNU6-752P-201ENST00000516376 102 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms