Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 Y_RNA.374-201ENST00000365606 101 ntBASIC0.08□□□□□ -2.4
LIMA1Q9UHB6 Y_RNA.558-201ENST00000384685 113 ntBASIC0.08□□□□□ -2.4
LIMA1Q9UHB6 MIR4796-201ENST00000580742 81 ntBASIC0.08□□□□□ -2.4
LIMA1Q9UHB6 RNU6-633P-201ENST00000362612 103 ntBASIC0.07□□□□□ -2.4
LIMA1Q9UHB6 Y_RNA.407-201ENST00000383986 113 ntBASIC0.07□□□□□ -2.4
LIMA1Q9UHB6 SNORD42B-201ENST00000458893 67 ntBASIC0.07□□□□□ -2.4
LIMA1Q9UHB6 RNU6-267P-201ENST00000516714 103 ntBASIC0.07□□□□□ -2.4
LIMA1Q9UHB6 SCARNA11.2-201ENST00000517183 154 ntBASIC0.07□□□□□ -2.4
LIMA1Q9UHB6 Y_RNA.68-201ENST00000362881 102 ntBASIC0.06□□□□□ -2.4
LIMA1Q9UHB6 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
LIMA1Q9UHB6 MIR1236-201ENST00000408340 102 ntBASIC0.06□□□□□ -2.4
LIMA1Q9UHB6 RNU6-402P-201ENST00000410678 103 ntBASIC0.06□□□□□ -2.4
LIMA1Q9UHB6 RNU7-188P-201ENST00000517063 64 ntBASIC0.06□□□□□ -2.4
LIMA1Q9UHB6 Y_RNA.220-201ENST00000364244 109 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 RNU6-652P-201ENST00000365488 107 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 RNU6-154P-201ENST00000384306 106 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 MIR593-201ENST00000384856 100 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 MIR145-201ENST00000384967 88 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 MIR652-201ENST00000385278 98 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 snoU13.17-201ENST00000458802 104 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 Y_RNA.681-201ENST00000516445 113 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 RNU6-844P-201ENST00000517175 102 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 RN7SL660P-201ENST00000614852 299 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 AC084368.1-201ENST00000620935 65 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 uc_338.10-201ENST00000621872 182 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 SNORD116-22-201ENST00000384430 92 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 MIR519C-201ENST00000385053 87 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 SNORA75.1-201ENST00000391130 148 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 RNU6-175P-201ENST00000516896 107 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 RNU6-762P-201ENST00000517107 102 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 RNU6-495P-201ENST00000362995 107 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 RNU6-675P-201ENST00000384236 104 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 RNU6-1177P-201ENST00000391058 104 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 MTATP6P29-201ENST00000415057 132 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 RNA5SP285-201ENST00000516619 119 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 MIR4743-201ENST00000584576 69 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 RNY4P30-201ENST00000410216 95 ntBASIC0.02□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.593-201ENST00000410292 98 ntBASIC0.02□□□□□ -2.41
LIMA1Q9UHB6 RNU6-180P-201ENST00000516697 61 ntBASIC0.02□□□□□ -2.41
LIMA1Q9UHB6 MIR4290-201ENST00000583807 95 ntBASIC0.02□□□□□ -2.41
LIMA1Q9UHB6 RNU6-824P-201ENST00000363724 104 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 RNU6-302P-201ENST00000365249 107 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 RNY4P3-201ENST00000365254 95 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 MIR582-201ENST00000365731 98 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 MIR329-2-201ENST00000385029 84 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 RNA5SP163-201ENST00000410304 99 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 SCARNA17.3-201ENST00000516381 125 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 MIR6718-201ENST00000616153 80 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.17-201ENST00000362433 111 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 RNU6-1298P-201ENST00000362456 101 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 RNU5F-1-201ENST00000362507 117 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 MIR892B-201ENST00000401279 77 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 RNU7-165P-201ENST00000458864 60 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.660-201ENST00000516002 120 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.694-201ENST00000516677 117 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 MIR6514-201ENST00000622549 70 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 MIR548BB-201ENST00000626714 66 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 SNORD114-29-201ENST00000364819 70 ntBASIC-0.01□□□□□ -2.41
LIMA1Q9UHB6 SNORA49-201ENST00000386157 136 ntBASIC-0.01□□□□□ -2.41
LIMA1Q9UHB6 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.01□□□□□ -2.41
LIMA1Q9UHB6 SNORD75.2-201ENST00000408784 58 ntBASIC-0.01□□□□□ -2.41
LIMA1Q9UHB6 RNU7-24P-201ENST00000458867 62 ntBASIC-0.01□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 RNU6-382P-201ENST00000365181 106 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 RNU6-929P-201ENST00000384429 107 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 MIR548E-201ENST00000408287 88 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 AC097510.1-201ENST00000510945 133 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 CR383656.4-201ENST00000546909 122 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 AC140658.3-201ENST00000567603 271 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 MIR20A-201ENST00000362279 71 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 MIR106A-201ENST00000384870 81 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 RNU7-159P-201ENST00000459284 62 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 SNORA40.17-201ENST00000517256 115 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 MIR5582-201ENST00000579697 68 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 U6.81-201ENST00000612550 106 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.04□□□□□ -2.42
LIMA1Q9UHB6 RNU6-624P-201ENST00000363411 107 ntBASIC-0.04□□□□□ -2.42
LIMA1Q9UHB6 AC244090.1-201ENST00000441884 93 ntBASIC-0.04□□□□□ -2.42
LIMA1Q9UHB6 AC093729.1-201ENST00000513074 128 ntBASIC-0.04□□□□□ -2.42
LIMA1Q9UHB6 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.04□□□□□ -2.42
LIMA1Q9UHB6 MIR2909-201ENST00000617113 69 ntBASIC-0.04□□□□□ -2.42
LIMA1Q9UHB6 MIR148A-201ENST00000362215 68 ntBASIC-0.05□□□□□ -2.42
LIMA1Q9UHB6 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.05□□□□□ -2.42
LIMA1Q9UHB6 RNU6-990P-201ENST00000364385 104 ntBASIC-0.05□□□□□ -2.42
LIMA1Q9UHB6 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.05□□□□□ -2.42
LIMA1Q9UHB6 AC145423.2-201ENST00000610631 239 ntBASIC-0.05□□□□□ -2.42
LIMA1Q9UHB6 AC006160.2-201ENST00000637708 154 ntBASIC-0.05□□□□□ -2.42
LIMA1Q9UHB6 RNA5SP98-201ENST00000363158 137 ntBASIC-0.06□□□□□ -2.42
LIMA1Q9UHB6 SNORD115-37-201ENST00000363768 82 ntBASIC-0.06□□□□□ -2.42
LIMA1Q9UHB6 SNORD114-4-201ENST00000363962 75 ntBASIC-0.06□□□□□ -2.42
LIMA1Q9UHB6 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms