Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MIR378F-201ENST00000578143 78 ntBASIC-0.95□□□□□ -2.56
BLOC1S4Q9NUP1 MIR3613-201ENST00000579844 87 ntBASIC-0.95□□□□□ -2.56
BLOC1S4Q9NUP1 AC103810.7-201ENST00000607821 91 ntBASIC-0.95□□□□□ -2.56
BLOC1S4Q9NUP1 uc_338.19-201ENST00000616808 99 ntBASIC-0.95□□□□□ -2.56
BLOC1S4Q9NUP1 SNORA63.2-201ENST00000362603 126 ntBASIC-0.96□□□□□ -2.56
BLOC1S4Q9NUP1 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.96□□□□□ -2.56
BLOC1S4Q9NUP1 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.96□□□□□ -2.56
BLOC1S4Q9NUP1 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.96□□□□□ -2.56
BLOC1S4Q9NUP1 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.96□□□□□ -2.56
BLOC1S4Q9NUP1 MIR6851-201ENST00000617060 67 ntBASIC-0.96□□□□□ -2.56
BLOC1S4Q9NUP1 RNY4P3-201ENST00000365254 95 ntBASIC-0.97□□□□□ -2.56
BLOC1S4Q9NUP1 RNU6-880P-201ENST00000384526 107 ntBASIC-0.97□□□□□ -2.56
BLOC1S4Q9NUP1 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.97□□□□□ -2.56
BLOC1S4Q9NUP1 MIR204-201ENST00000385200 110 ntBASIC-0.97□□□□□ -2.56
BLOC1S4Q9NUP1 SNORA49-201ENST00000386157 136 ntBASIC-0.97□□□□□ -2.56
BLOC1S4Q9NUP1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.97□□□□□ -2.56
BLOC1S4Q9NUP1 RNU7-55P-201ENST00000459426 62 ntBASIC-0.97□□□□□ -2.56
BLOC1S4Q9NUP1 RNU6-431P-201ENST00000383874 107 ntBASIC-0.98□□□□□ -2.57
BLOC1S4Q9NUP1 MIR548E-201ENST00000408287 88 ntBASIC-0.98□□□□□ -2.57
BLOC1S4Q9NUP1 RNU6-519P-201ENST00000410590 108 ntBASIC-0.98□□□□□ -2.57
BLOC1S4Q9NUP1 SNORA13-201ENST00000458790 133 ntBASIC-0.98□□□□□ -2.57
BLOC1S4Q9NUP1 AC021146.6-201ENST00000514659 117 ntBASIC-0.98□□□□□ -2.57
BLOC1S4Q9NUP1 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.99□□□□□ -2.57
BLOC1S4Q9NUP1 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.99□□□□□ -2.57
BLOC1S4Q9NUP1 SCARNA18B-201ENST00000458806 135 ntBASIC-0.99□□□□□ -2.57
BLOC1S4Q9NUP1 RNA5SP476-201ENST00000516613 103 ntBASIC-0.99□□□□□ -2.57
BLOC1S4Q9NUP1 RNU6-719P-201ENST00000516671 104 ntBASIC-0.99□□□□□ -2.57
BLOC1S4Q9NUP1 MIR3064-201ENST00000581130 66 ntBASIC-0.99□□□□□ -2.57
BLOC1S4Q9NUP1 AC104996.3-201ENST00000590718 94 ntBASIC-0.99□□□□□ -2.57
BLOC1S4Q9NUP1 RNU6-274P-201ENST00000459566 107 ntBASIC-1□□□□□ -2.57
BLOC1S4Q9NUP1 MIR548Z-201ENST00000584743 97 ntBASIC-1□□□□□ -2.57
BLOC1S4Q9NUP1 MIR6738-201ENST00000619620 64 ntBASIC-1□□□□□ -2.57
BLOC1S4Q9NUP1 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.01□□□□□ -2.57
BLOC1S4Q9NUP1 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.01□□□□□ -2.57
BLOC1S4Q9NUP1 SNORD64-201ENST00000386683 67 ntBASIC-1.01□□□□□ -2.57
BLOC1S4Q9NUP1 SNORD4B-201ENST00000459083 72 ntBASIC-1.01□□□□□ -2.57
BLOC1S4Q9NUP1 AC145423.2-201ENST00000610631 239 ntBASIC-1.01□□□□□ -2.57
BLOC1S4Q9NUP1 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.02□□□□□ -2.57
BLOC1S4Q9NUP1 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.02□□□□□ -2.57
BLOC1S4Q9NUP1 RNU6-132P-201ENST00000383863 107 ntBASIC-1.02□□□□□ -2.57
BLOC1S4Q9NUP1 SNORD116-14-201ENST00000383894 92 ntBASIC-1.02□□□□□ -2.57
BLOC1S4Q9NUP1 SNORD116-17-201ENST00000383929 92 ntBASIC-1.02□□□□□ -2.57
BLOC1S4Q9NUP1 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.02□□□□□ -2.57
BLOC1S4Q9NUP1 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.02□□□□□ -2.57
BLOC1S4Q9NUP1 SNORD116-15-201ENST00000384445 92 ntBASIC-1.02□□□□□ -2.57
BLOC1S4Q9NUP1 SNORD116-19-201ENST00000384729 92 ntBASIC-1.02□□□□□ -2.57
BLOC1S4Q9NUP1 MIR517B-201ENST00000385102 67 ntBASIC-1.02□□□□□ -2.57
BLOC1S4Q9NUP1 RNU6-62P-201ENST00000516526 102 ntBASIC-1.02□□□□□ -2.57
BLOC1S4Q9NUP1 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.03□□□□□ -2.57
BLOC1S4Q9NUP1 RNU6-973P-201ENST00000364690 107 ntBASIC-1.03□□□□□ -2.57
BLOC1S4Q9NUP1 MIR582-201ENST00000365731 98 ntBASIC-1.03□□□□□ -2.57
BLOC1S4Q9NUP1 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.03□□□□□ -2.57
BLOC1S4Q9NUP1 RNU6-972P-201ENST00000391208 107 ntBASIC-1.03□□□□□ -2.57
BLOC1S4Q9NUP1 snoU13.13-201ENST00000458842 104 ntBASIC-1.03□□□□□ -2.57
BLOC1S4Q9NUP1 SNORD42B-201ENST00000458893 67 ntBASIC-1.03□□□□□ -2.57
BLOC1S4Q9NUP1 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.03□□□□□ -2.57
BLOC1S4Q9NUP1 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.03□□□□□ -2.57
BLOC1S4Q9NUP1 MIR3179-1-201ENST00000578940 84 ntBASIC-1.03□□□□□ -2.57
BLOC1S4Q9NUP1 MIR3179-2-201ENST00000579107 84 ntBASIC-1.03□□□□□ -2.57
BLOC1S4Q9NUP1 MIR3179-3-201ENST00000579566 84 ntBASIC-1.03□□□□□ -2.57
BLOC1S4Q9NUP1 MIR3179-4-201ENST00000617599 84 ntBASIC-1.03□□□□□ -2.57
BLOC1S4Q9NUP1 SNORD22.1-201ENST00000516331 125 ntBASIC-1.04□□□□□ -2.58
BLOC1S4Q9NUP1 MIR4777-201ENST00000583710 86 ntBASIC-1.04□□□□□ -2.58
BLOC1S4Q9NUP1 MIR382-201ENST00000637119 76 ntBASIC-1.04□□□□□ -2.58
BLOC1S4Q9NUP1 SNORD114-15-201ENST00000364687 72 ntBASIC-1.05□□□□□ -2.58
BLOC1S4Q9NUP1 RNU6-209P-201ENST00000384118 107 ntBASIC-1.05□□□□□ -2.58
BLOC1S4Q9NUP1 RNU6-24P-201ENST00000384440 107 ntBASIC-1.05□□□□□ -2.58
BLOC1S4Q9NUP1 SNORD116-21-201ENST00000384507 92 ntBASIC-1.05□□□□□ -2.58
BLOC1S4Q9NUP1 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.05□□□□□ -2.58
BLOC1S4Q9NUP1 AC140658.3-201ENST00000567603 271 ntBASIC-1.05□□□□□ -2.58
BLOC1S4Q9NUP1 RNU6-495P-201ENST00000362995 107 ntBASIC-1.06□□□□□ -2.58
BLOC1S4Q9NUP1 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.06□□□□□ -2.58
BLOC1S4Q9NUP1 SNORA63.6-201ENST00000364921 119 ntBASIC-1.06□□□□□ -2.58
BLOC1S4Q9NUP1 RNU6-10P-201ENST00000384036 107 ntBASIC-1.06□□□□□ -2.58
BLOC1S4Q9NUP1 MTATP6P29-201ENST00000415057 132 ntBASIC-1.06□□□□□ -2.58
BLOC1S4Q9NUP1 SCARNA23-201ENST00000516060 130 ntBASIC-1.06□□□□□ -2.58
BLOC1S4Q9NUP1 MIR3115-201ENST00000577915 68 ntBASIC-1.06□□□□□ -2.58
BLOC1S4Q9NUP1 MIR147A-201ENST00000385079 72 ntBASIC-1.07□□□□□ -2.58
BLOC1S4Q9NUP1 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.07□□□□□ -2.58
BLOC1S4Q9NUP1 MIR3668-201ENST00000582138 75 ntBASIC-1.07□□□□□ -2.58
BLOC1S4Q9NUP1 MIR5704-201ENST00000584029 77 ntBASIC-1.07□□□□□ -2.58
BLOC1S4Q9NUP1 MIR8068-201ENST00000618032 68 ntBASIC-1.07□□□□□ -2.58
BLOC1S4Q9NUP1 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.08□□□□□ -2.58
BLOC1S4Q9NUP1 MIR518B-201ENST00000385127 83 ntBASIC-1.08□□□□□ -2.58
BLOC1S4Q9NUP1 AP000533.3-201ENST00000447704 118 ntBASIC-1.08□□□□□ -2.58
BLOC1S4Q9NUP1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.08□□□□□ -2.58
BLOC1S4Q9NUP1 RNU7-24P-201ENST00000458867 62 ntBASIC-1.08□□□□□ -2.58
BLOC1S4Q9NUP1 AC022137.1-201ENST00000483735 151 ntBASIC-1.08□□□□□ -2.58
BLOC1S4Q9NUP1 RNU6-795P-201ENST00000516323 103 ntBASIC-1.08□□□□□ -2.58
BLOC1S4Q9NUP1 MIR548AX-201ENST00000580117 73 ntBASIC-1.08□□□□□ -2.58
BLOC1S4Q9NUP1 MIR3671-201ENST00000580455 88 ntBASIC-1.08□□□□□ -2.58
BLOC1S4Q9NUP1 MIR4306-201ENST00000583390 91 ntBASIC-1.08□□□□□ -2.58
BLOC1S4Q9NUP1 RNU6-502P-201ENST00000362419 108 ntBASIC-1.09□□□□□ -2.58
BLOC1S4Q9NUP1 AC012531.4-201ENST00000616509 177 ntBASIC-1.09□□□□□ -2.58
BLOC1S4Q9NUP1 RNU6-887P-201ENST00000410660 100 ntBASIC-1.1□□□□□ -2.59
BLOC1S4Q9NUP1 MIR3140-201ENST00000583685 90 ntBASIC-1.1□□□□□ -2.59
BLOC1S4Q9NUP1 RNU6-704P-201ENST00000364162 103 ntBASIC-1.11□□□□□ -2.59
BLOC1S4Q9NUP1 SNORD75.2-201ENST00000408784 58 ntBASIC-1.11□□□□□ -2.59
BLOC1S4Q9NUP1 RNU6-904P-201ENST00000516206 101 ntBASIC-1.11□□□□□ -2.59
BLOC1S4Q9NUP1 snoR1.1-201ENST00000628177 80 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms