Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RNA5SP327-201ENST00000362494 101 ntBASIC1.6□□□□□ -2.15
PRDM9Q9NQV7 RNA5SP227-201ENST00000516184 113 ntBASIC1.6□□□□□ -2.15
PRDM9Q9NQV7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.6□□□□□ -2.15
PRDM9Q9NQV7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
PRDM9Q9NQV7 Y_RNA.379-201ENST00000365653 102 ntBASIC1.59□□□□□ -2.15
PRDM9Q9NQV7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.59□□□□□ -2.15
PRDM9Q9NQV7 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
PRDM9Q9NQV7 MIR652-201ENST00000385278 98 ntBASIC1.58□□□□□ -2.16
PRDM9Q9NQV7 MIR548E-201ENST00000408287 88 ntBASIC1.58□□□□□ -2.16
PRDM9Q9NQV7 AC006210.1-201ENST00000424882 111 ntBASIC1.58□□□□□ -2.16
PRDM9Q9NQV7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.58□□□□□ -2.16
PRDM9Q9NQV7 RNU6-1312P-201ENST00000362425 108 ntBASIC1.57□□□□□ -2.16
PRDM9Q9NQV7 RNA5SP190-201ENST00000365222 118 ntBASIC1.57□□□□□ -2.16
PRDM9Q9NQV7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PRDM9Q9NQV7 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
PRDM9Q9NQV7 RNU1-17P-201ENST00000363022 152 ntBASIC1.56□□□□□ -2.16
PRDM9Q9NQV7 Y_RNA.246-201ENST00000364495 108 ntBASIC1.56□□□□□ -2.16
PRDM9Q9NQV7 Y_RNA.338-201ENST00000365320 114 ntBASIC1.56□□□□□ -2.16
PRDM9Q9NQV7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
PRDM9Q9NQV7 SNORD110-201ENST00000408189 75 ntBASIC1.55□□□□□ -2.16
PRDM9Q9NQV7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.55□□□□□ -2.16
PRDM9Q9NQV7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
PRDM9Q9NQV7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PRDM9Q9NQV7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.54□□□□□ -2.16
PRDM9Q9NQV7 MIR582-201ENST00000365731 98 ntBASIC1.54□□□□□ -2.16
PRDM9Q9NQV7 MIR4498-201ENST00000577599 66 ntBASIC1.54□□□□□ -2.16
PRDM9Q9NQV7 MIR548AE1-201ENST00000583292 70 ntBASIC1.54□□□□□ -2.16
PRDM9Q9NQV7 AL021921.1-201ENST00000442774 93 ntBASIC1.53□□□□□ -2.16
PRDM9Q9NQV7 SNORD13-201ENST00000459299 104 ntBASIC1.53□□□□□ -2.16
PRDM9Q9NQV7 SNORD124-201ENST00000459577 104 ntBASIC1.53□□□□□ -2.16
PRDM9Q9NQV7 RNA5SP268-201ENST00000516828 124 ntBASIC1.53□□□□□ -2.16
PRDM9Q9NQV7 MIR18A-201ENST00000362310 71 ntBASIC1.52□□□□□ -2.17
PRDM9Q9NQV7 SNORD114-24-201ENST00000365029 72 ntBASIC1.52□□□□□ -2.17
PRDM9Q9NQV7 SNORA67.5-201ENST00000391036 107 ntBASIC1.52□□□□□ -2.17
PRDM9Q9NQV7 RNA5SP247-201ENST00000411181 105 ntBASIC1.52□□□□□ -2.17
PRDM9Q9NQV7 RNA5SP255-201ENST00000516370 107 ntBASIC1.52□□□□□ -2.17
PRDM9Q9NQV7 MIR4473-201ENST00000583731 91 ntBASIC1.52□□□□□ -2.17
PRDM9Q9NQV7 SNORA36.1-201ENST00000363424 132 ntBASIC1.51□□□□□ -2.17
PRDM9Q9NQV7 SNORA25.8-201ENST00000364831 128 ntBASIC1.51□□□□□ -2.17
PRDM9Q9NQV7 SNORD26-201ENST00000384147 75 ntBASIC1.5□□□□□ -2.17
PRDM9Q9NQV7 SNORA41B-201ENST00000384785 128 ntBASIC1.5□□□□□ -2.17
PRDM9Q9NQV7 RNU4-88P-201ENST00000411220 86 ntBASIC1.5□□□□□ -2.17
PRDM9Q9NQV7 RNU6-231P-201ENST00000517122 103 ntBASIC1.5□□□□□ -2.17
PRDM9Q9NQV7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 RNU1-124P-201ENST00000363861 145 ntBASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 Y_RNA.325-201ENST00000365171 122 ntBASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 AC108667.1-201ENST00000428618 249 ntBASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 snoU13.31-201ENST00000607291 104 ntBASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 MIR7107-201ENST00000611489 80 ntBASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 SNORD116-16-201ENST00000384533 92 ntBASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 MIR618-201ENST00000385287 98 ntBASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 RNA5SP94-201ENST00000516917 108 ntBASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 U6.96-201ENST00000636425 70 ntBASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 SNORA17.3-201ENST00000391159 129 ntBASIC1.47□□□□□ -2.17
PRDM9Q9NQV7 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.47□□□□□ -2.17
PRDM9Q9NQV7 CYP3A54P-201ENST00000566950 75 ntBASIC1.47□□□□□ -2.17
PRDM9Q9NQV7 MIR378A-201ENST00000362177 66 ntBASIC1.46□□□□□ -2.18
PRDM9Q9NQV7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.46□□□□□ -2.18
PRDM9Q9NQV7 AC244090.1-201ENST00000441884 93 ntBASIC1.46□□□□□ -2.18
PRDM9Q9NQV7 SNORD2-201ENST00000459163 69 ntBASIC1.46□□□□□ -2.18
PRDM9Q9NQV7 MIR5706-201ENST00000579841 80 ntBASIC1.46□□□□□ -2.18
PRDM9Q9NQV7 Y_RNA.74-201ENST00000362911 99 ntBASIC1.45□□□□□ -2.18
PRDM9Q9NQV7 MIR516B1-201ENST00000385211 90 ntBASIC1.45□□□□□ -2.18
PRDM9Q9NQV7 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
PRDM9Q9NQV7 AC011195.1-201ENST00000578177 177 ntBASIC1.45□□□□□ -2.18
PRDM9Q9NQV7 MIR548AD-201ENST00000584780 82 ntBASIC1.45□□□□□ -2.18
PRDM9Q9NQV7 AC243829.3-201ENST00000622177 108 ntBASIC1.45□□□□□ -2.18
PRDM9Q9NQV7 SNORD99-201ENST00000408612 74 ntBASIC1.44□□□□□ -2.18
PRDM9Q9NQV7 RNU6-518P-201ENST00000516056 96 ntBASIC1.44□□□□□ -2.18
PRDM9Q9NQV7 MIR20A-201ENST00000362279 71 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 SNORA9.1-201ENST00000362412 131 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 RNU6-753P-201ENST00000363926 107 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 RNU6-1246P-201ENST00000391064 107 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 RNU6-980P-201ENST00000516925 103 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 MIR4303-201ENST00000581299 66 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 RNU1-42P-201ENST00000364033 160 ntBASIC1.42□□□□□ -2.18
PRDM9Q9NQV7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.42□□□□□ -2.18
PRDM9Q9NQV7 RNA5SP404-201ENST00000517118 132 ntBASIC1.42□□□□□ -2.18
PRDM9Q9NQV7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.42□□□□□ -2.18
PRDM9Q9NQV7 AC243829.6-201ENST00000612652 106 ntBASIC1.42□□□□□ -2.18
PRDM9Q9NQV7 SNORA70.25-201ENST00000612741 95 ntBASIC1.42□□□□□ -2.18
PRDM9Q9NQV7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
PRDM9Q9NQV7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.41□□□□□ -2.18
PRDM9Q9NQV7 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
PRDM9Q9NQV7 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
PRDM9Q9NQV7 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
PRDM9Q9NQV7 RNU4-62P-201ENST00000410125 130 ntBASIC1.4□□□□□ -2.19
PRDM9Q9NQV7 RNU6-321P-201ENST00000410912 106 ntBASIC1.4□□□□□ -2.19
PRDM9Q9NQV7 HMGN2P22-201ENST00000427588 175 ntBASIC1.4□□□□□ -2.19
PRDM9Q9NQV7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
PRDM9Q9NQV7 AP1B1P2-201ENST00000416196 106 ntBASIC1.38□□□□□ -2.19
PRDM9Q9NQV7 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
PRDM9Q9NQV7 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
PRDM9Q9NQV7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.38□□□□□ -2.19
PRDM9Q9NQV7 RNU7-154P-201ENST00000516194 62 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms