Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SNORA70.25-201ENST00000612741 95 ntBASIC1.02□□□□□ -2.25
SSU72Q9NP77 SNORA2.1-201ENST00000363089 137 ntBASIC1.01□□□□□ -2.25
SSU72Q9NP77 MIR7-2-201ENST00000384970 110 ntBASIC1.01□□□□□ -2.25
SSU72Q9NP77 RNU6-321P-201ENST00000410912 106 ntBASIC1.01□□□□□ -2.25
SSU72Q9NP77 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.01□□□□□ -2.25
SSU72Q9NP77 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
SSU72Q9NP77 Y_RNA.205-201ENST00000364128 113 ntBASIC1□□□□□ -2.25
SSU72Q9NP77 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
SSU72Q9NP77 RNA5SP147-201ENST00000516493 109 ntBASIC1□□□□□ -2.25
SSU72Q9NP77 MIR6078-201ENST00000611069 100 ntBASIC1□□□□□ -2.25
SSU72Q9NP77 SNORA25.4-201ENST00000363666 124 ntBASIC0.99□□□□□ -2.25
SSU72Q9NP77 Y_RNA.327-201ENST00000365201 102 ntBASIC0.99□□□□□ -2.25
SSU72Q9NP77 MIR608-201ENST00000384820 100 ntBASIC0.99□□□□□ -2.25
SSU72Q9NP77 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.99□□□□□ -2.25
SSU72Q9NP77 AL353770.2-201ENST00000620024 78 ntBASIC0.99□□□□□ -2.25
SSU72Q9NP77 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.99□□□□□ -2.25
SSU72Q9NP77 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.98□□□□□ -2.25
SSU72Q9NP77 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.98□□□□□ -2.25
SSU72Q9NP77 Y_RNA.164-201ENST00000363709 102 ntBASIC0.98□□□□□ -2.25
SSU72Q9NP77 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
SSU72Q9NP77 MIR652-201ENST00000385278 98 ntBASIC0.98□□□□□ -2.25
SSU72Q9NP77 SNORD110-201ENST00000408189 75 ntBASIC0.98□□□□□ -2.25
SSU72Q9NP77 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
SSU72Q9NP77 RNU6-656P-201ENST00000516785 107 ntBASIC0.98□□□□□ -2.25
SSU72Q9NP77 MIR6739-201ENST00000622461 75 ntBASIC0.98□□□□□ -2.25
SSU72Q9NP77 RNU6-645P-201ENST00000364649 106 ntBASIC0.97□□□□□ -2.25
SSU72Q9NP77 SNORA36.2-201ENST00000384004 127 ntBASIC0.97□□□□□ -2.25
SSU72Q9NP77 AC069271.1-201ENST00000445577 156 ntBASIC0.97□□□□□ -2.25
SSU72Q9NP77 RNU6-392P-201ENST00000364926 101 ntBASIC0.96□□□□□ -2.26
SSU72Q9NP77 MIR140-201ENST00000385282 100 ntBASIC0.96□□□□□ -2.26
SSU72Q9NP77 AC006210.1-201ENST00000424882 111 ntBASIC0.96□□□□□ -2.26
SSU72Q9NP77 SNORD114-4-201ENST00000363962 75 ntBASIC0.95□□□□□ -2.26
SSU72Q9NP77 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
SSU72Q9NP77 MIR582-201ENST00000365731 98 ntBASIC0.95□□□□□ -2.26
SSU72Q9NP77 Y_RNA.407-201ENST00000383986 113 ntBASIC0.95□□□□□ -2.26
SSU72Q9NP77 HMGN2P22-201ENST00000427588 175 ntBASIC0.95□□□□□ -2.26
SSU72Q9NP77 snoU13.13-201ENST00000458842 104 ntBASIC0.95□□□□□ -2.26
SSU72Q9NP77 MIR4473-201ENST00000583731 91 ntBASIC0.95□□□□□ -2.26
SSU72Q9NP77 SNORD118-201ENST00000363593 134 ntBASIC0.94□□□□□ -2.26
SSU72Q9NP77 SCARNA17.3-201ENST00000516381 125 ntBASIC0.94□□□□□ -2.26
SSU72Q9NP77 SNORA25.18-201ENST00000607153 114 ntBASIC0.94□□□□□ -2.26
SSU72Q9NP77 Y_RNA.633-201ENST00000459107 95 ntBASIC0.93□□□□□ -2.26
SSU72Q9NP77 MIR4511-201ENST00000582784 87 ntBASIC0.93□□□□□ -2.26
SSU72Q9NP77 RNA5SP247-201ENST00000411181 105 ntBASIC0.92□□□□□ -2.26
SSU72Q9NP77 MTND4LP1-201ENST00000446263 157 ntBASIC0.92□□□□□ -2.26
SSU72Q9NP77 AC087343.1-201ENST00000477341 475 ntBASIC0.92□□□□□ -2.26
SSU72Q9NP77 RNU6-668P-201ENST00000364180 107 ntBASIC0.91□□□□□ -2.26
SSU72Q9NP77 Y_RNA.375-201ENST00000365625 101 ntBASIC0.91□□□□□ -2.26
SSU72Q9NP77 MIR9-2-201ENST00000384838 87 ntBASIC0.91□□□□□ -2.26
SSU72Q9NP77 MIR499A-201ENST00000384903 122 ntBASIC0.91□□□□□ -2.26
SSU72Q9NP77 MIR548E-201ENST00000408287 88 ntBASIC0.91□□□□□ -2.26
SSU72Q9NP77 RNU6-1232P-201ENST00000516299 86 ntBASIC0.91□□□□□ -2.26
SSU72Q9NP77 Y_RNA.250-201ENST00000364542 110 ntBASIC0.9□□□□□ -2.27
SSU72Q9NP77 RNU4-54P-201ENST00000516428 129 ntBASIC0.9□□□□□ -2.27
SSU72Q9NP77 AC092634.7-201ENST00000621022 103 ntBASIC0.9□□□□□ -2.27
SSU72Q9NP77 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.27
SSU72Q9NP77 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.89□□□□□ -2.27
SSU72Q9NP77 MIR521-2-201ENST00000384818 87 ntBASIC0.88□□□□□ -2.27
SSU72Q9NP77 SNORA40.8-201ENST00000411034 126 ntBASIC0.88□□□□□ -2.27
SSU72Q9NP77 MIR5706-201ENST00000579841 80 ntBASIC0.88□□□□□ -2.27
SSU72Q9NP77 AC211469.2-201ENST00000605461 205 ntBASIC0.88□□□□□ -2.27
SSU72Q9NP77 MIR8070-201ENST00000616510 88 ntBASIC0.88□□□□□ -2.27
SSU72Q9NP77 AC103706.3-201ENST00000636297 85 ntBASIC0.88□□□□□ -2.27
SSU72Q9NP77 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
SSU72Q9NP77 Y_RNA.226-201ENST00000364337 114 ntBASIC0.87□□□□□ -2.27
SSU72Q9NP77 MIR1287-201ENST00000408492 90 ntBASIC0.87□□□□□ -2.27
SSU72Q9NP77 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
SSU72Q9NP77 MIR6755-201ENST00000619993 66 ntBASIC0.87□□□□□ -2.27
SSU72Q9NP77 Y_RNA.125-201ENST00000363371 111 ntBASIC0.86□□□□□ -2.27
SSU72Q9NP77 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
SSU72Q9NP77 MIR518A1-201ENST00000385068 85 ntBASIC0.86□□□□□ -2.27
SSU72Q9NP77 AL157398.1-201ENST00000452981 186 ntBASIC0.86□□□□□ -2.27
SSU72Q9NP77 AC021146.9-201ENST00000512503 156 ntBASIC0.86□□□□□ -2.27
SSU72Q9NP77 RNU6-1089P-201ENST00000516473 104 ntBASIC0.86□□□□□ -2.27
SSU72Q9NP77 uc_338.10-201ENST00000621872 182 ntBASIC0.86□□□□□ -2.27
SSU72Q9NP77 SNORA33.1-201ENST00000364957 130 ntBASIC0.85□□□□□ -2.27
SSU72Q9NP77 RNU6-110P-201ENST00000384508 104 ntBASIC0.85□□□□□ -2.27
SSU72Q9NP77 AC110620.1-201ENST00000416042 228 ntBASIC0.85□□□□□ -2.27
SSU72Q9NP77 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.85□□□□□ -2.27
SSU72Q9NP77 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
SSU72Q9NP77 SNORA63.6-201ENST00000364921 119 ntBASIC0.84□□□□□ -2.27
SSU72Q9NP77 PSMC1P5-201ENST00000512850 177 ntBASIC0.84□□□□□ -2.27
SSU72Q9NP77 MIR6504-201ENST00000613520 61 ntBASIC0.84□□□□□ -2.27
SSU72Q9NP77 RNU6-1162P-201ENST00000384443 104 ntBASIC0.83□□□□□ -2.28
SSU72Q9NP77 AC098934.3-201ENST00000430450 190 ntBASIC0.83□□□□□ -2.28
SSU72Q9NP77 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
SSU72Q9NP77 AL590095.2-201ENST00000604136 117 ntBASIC0.83□□□□□ -2.28
SSU72Q9NP77 Y_RNA.423-201ENST00000384057 113 ntBASIC0.82□□□□□ -2.28
SSU72Q9NP77 RNU6-542P-201ENST00000516405 103 ntBASIC0.82□□□□□ -2.28
SSU72Q9NP77 Y_RNA.224-201ENST00000364308 111 ntBASIC0.81□□□□□ -2.28
SSU72Q9NP77 SNORA2A-201ENST00000383885 135 ntBASIC0.81□□□□□ -2.28
SSU72Q9NP77 SNORA15B-2-201ENST00000384058 135 ntBASIC0.81□□□□□ -2.28
SSU72Q9NP77 SNORA15B-1-201ENST00000384334 135 ntBASIC0.81□□□□□ -2.28
SSU72Q9NP77 MIR1276-201ENST00000408707 83 ntBASIC0.81□□□□□ -2.28
SSU72Q9NP77 RNA5SP102-201ENST00000516865 106 ntBASIC0.81□□□□□ -2.28
SSU72Q9NP77 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
SSU72Q9NP77 RNA5SP215-201ENST00000363440 122 ntBASIC0.8□□□□□ -2.28
SSU72Q9NP77 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
SSU72Q9NP77 RNA5SP299-201ENST00000391203 116 ntBASIC0.8□□□□□ -2.28
SSU72Q9NP77 RNU6-229P-201ENST00000516614 102 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms