Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 Y_RNA.558-201ENST00000384685 113 ntBASIC0.06□□□□□ -2.4
Q9N2J8 RNU6-633P-201ENST00000362612 103 ntBASIC0.05□□□□□ -2.4
Q9N2J8 SNORD114-4-201ENST00000363962 75 ntBASIC0.05□□□□□ -2.4
Q9N2J8 Y_RNA.258-201ENST00000364613 105 ntBASIC0.05□□□□□ -2.4
Q9N2J8 SNORD114-29-201ENST00000364819 70 ntBASIC0.05□□□□□ -2.4
Q9N2J8 MIR593-201ENST00000384856 100 ntBASIC0.05□□□□□ -2.4
Q9N2J8 Y_RNA.620-201ENST00000411009 88 ntBASIC0.05□□□□□ -2.4
Q9N2J8 SNORD114-5-201ENST00000362928 70 ntBASIC0.04□□□□□ -2.4
Q9N2J8 Y_RNA.115-201ENST00000363272 98 ntBASIC0.04□□□□□ -2.4
Q9N2J8 SNORD115-27-201ENST00000364430 82 ntBASIC0.04□□□□□ -2.4
Q9N2J8 SNORA24B-201ENST00000384176 131 ntBASIC0.04□□□□□ -2.4
Q9N2J8 MIR145-201ENST00000384967 88 ntBASIC0.04□□□□□ -2.4
Q9N2J8 RNU6-1177P-201ENST00000391058 104 ntBASIC0.04□□□□□ -2.4
Q9N2J8 MIR548H2-201ENST00000408874 88 ntBASIC0.04□□□□□ -2.4
Q9N2J8 Y_RNA.694-201ENST00000516677 117 ntBASIC0.04□□□□□ -2.4
Q9N2J8 RNU7-188P-201ENST00000517063 64 ntBASIC0.04□□□□□ -2.4
Q9N2J8 MIR4768-201ENST00000585270 74 ntBASIC0.04□□□□□ -2.4
Q9N2J8 SNORD115-37-201ENST00000363768 82 ntBASIC0.03□□□□□ -2.4
Q9N2J8 RNY1P7-201ENST00000384743 110 ntBASIC0.03□□□□□ -2.4
Q9N2J8 SNORD90-201ENST00000391145 111 ntBASIC0.03□□□□□ -2.4
Q9N2J8 MIR1197-201ENST00000408818 88 ntBASIC0.03□□□□□ -2.4
Q9N2J8 RNA5SP163-201ENST00000410304 99 ntBASIC0.03□□□□□ -2.4
Q9N2J8 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.03□□□□□ -2.4
Q9N2J8 MIR6718-201ENST00000616153 80 ntBASIC0.03□□□□□ -2.4
Q9N2J8 RNU6-402P-201ENST00000410678 103 ntBASIC0.02□□□□□ -2.41
Q9N2J8 RNU7-159P-201ENST00000459284 62 ntBASIC0.02□□□□□ -2.41
Q9N2J8 RNU7-153P-201ENST00000516455 62 ntBASIC0.02□□□□□ -2.41
Q9N2J8 RNU6-844P-201ENST00000517175 102 ntBASIC0.02□□□□□ -2.41
Q9N2J8 AL109933.3-201ENST00000619095 188 ntBASIC0.02□□□□□ -2.41
Q9N2J8 MIR20A-201ENST00000362279 71 ntBASIC0.01□□□□□ -2.41
Q9N2J8 RNU6-219P-201ENST00000364728 107 ntBASIC0.01□□□□□ -2.41
Q9N2J8 RNU6-1131P-201ENST00000364955 107 ntBASIC0.01□□□□□ -2.41
Q9N2J8 MIR652-201ENST00000385278 98 ntBASIC0.01□□□□□ -2.41
Q9N2J8 RNY4P30-201ENST00000410216 95 ntBASIC0.01□□□□□ -2.41
Q9N2J8 SCARNA17.3-201ENST00000516381 125 ntBASIC0.01□□□□□ -2.41
Q9N2J8 RNU6-762P-201ENST00000517107 102 ntBASIC0.01□□□□□ -2.41
Q9N2J8 MIR6514-201ENST00000622549 70 ntBASIC0.01□□□□□ -2.41
Q9N2J8 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
Q9N2J8 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
Q9N2J8 RNU6-1134P-201ENST00000365156 101 ntBASIC0□□□□□ -2.41
Q9N2J8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0□□□□□ -2.41
Q9N2J8 RNU6-495P-201ENST00000362995 107 ntBASIC-0.01□□□□□ -2.41
Q9N2J8 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Q9N2J8 AC244090.1-201ENST00000441884 93 ntBASIC-0.01□□□□□ -2.41
Q9N2J8 RNU6-180P-201ENST00000516697 61 ntBASIC-0.01□□□□□ -2.41
Q9N2J8 CR383656.4-201ENST00000546909 122 ntBASIC-0.01□□□□□ -2.41
Q9N2J8 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
Q9N2J8 RNU6-49P-201ENST00000384256 107 ntBASIC-0.02□□□□□ -2.41
Q9N2J8 SNORD75.2-201ENST00000408784 58 ntBASIC-0.02□□□□□ -2.41
Q9N2J8 RNU7-165P-201ENST00000458864 60 ntBASIC-0.02□□□□□ -2.41
Q9N2J8 RNU7-24P-201ENST00000458867 62 ntBASIC-0.02□□□□□ -2.41
Q9N2J8 SNORD42B-201ENST00000458893 67 ntBASIC-0.02□□□□□ -2.41
Q9N2J8 AC097510.1-201ENST00000510945 133 ntBASIC-0.02□□□□□ -2.41
Q9N2J8 AC093729.1-201ENST00000513074 128 ntBASIC-0.02□□□□□ -2.41
Q9N2J8 RN7SL660P-201ENST00000614852 299 ntBASIC-0.02□□□□□ -2.41
Q9N2J8 MIR148A-201ENST00000362215 68 ntBASIC-0.03□□□□□ -2.41
Q9N2J8 RNU6-267P-201ENST00000516714 103 ntBASIC-0.03□□□□□ -2.41
Q9N2J8 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
Q9N2J8 MIR5190-201ENST00000581537 80 ntBASIC-0.03□□□□□ -2.41
Q9N2J8 AC006254.2-201ENST00000603259 279 ntBASIC-0.03□□□□□ -2.41
Q9N2J8 RNU6-675P-201ENST00000384236 104 ntBASIC-0.04□□□□□ -2.42
Q9N2J8 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.05□□□□□ -2.42
Q9N2J8 RNU6-497P-201ENST00000365316 104 ntBASIC-0.05□□□□□ -2.42
Q9N2J8 MIR106A-201ENST00000384870 81 ntBASIC-0.05□□□□□ -2.42
Q9N2J8 AL450471.1-201ENST00000447509 127 ntBASIC-0.05□□□□□ -2.42
Q9N2J8 snoU13.17-201ENST00000458802 104 ntBASIC-0.05□□□□□ -2.42
Q9N2J8 AC104692.1-201ENST00000472406 90 ntBASIC-0.05□□□□□ -2.42
Q9N2J8 MIR548BB-201ENST00000626714 66 ntBASIC-0.05□□□□□ -2.42
Q9N2J8 RNA5SP257-201ENST00000363023 116 ntBASIC-0.06□□□□□ -2.42
Q9N2J8 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
Q9N2J8 RNU6-175P-201ENST00000516896 107 ntBASIC-0.06□□□□□ -2.42
Q9N2J8 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.07□□□□□ -2.42
Q9N2J8 SNORD2-201ENST00000459163 69 ntBASIC-0.07□□□□□ -2.42
Q9N2J8 MIR2909-201ENST00000617113 69 ntBASIC-0.07□□□□□ -2.42
Q9N2J8 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.07□□□□□ -2.42
Q9N2J8 RNU6-208P-201ENST00000362431 107 ntBASIC-0.08□□□□□ -2.42
Q9N2J8 RNA5SP98-201ENST00000363158 137 ntBASIC-0.08□□□□□ -2.42
Q9N2J8 RNU6-824P-201ENST00000363724 104 ntBASIC-0.08□□□□□ -2.42
Q9N2J8 RNU6-382P-201ENST00000365181 106 ntBASIC-0.08□□□□□ -2.42
Q9N2J8 RNU6-929P-201ENST00000384429 107 ntBASIC-0.08□□□□□ -2.42
Q9N2J8 SNORD77.2-201ENST00000391045 68 ntBASIC-0.08□□□□□ -2.42
Q9N2J8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.08□□□□□ -2.42
Q9N2J8 MIR4773-1-201ENST00000637203 78 ntBASIC-0.08□□□□□ -2.42
Q9N2J8 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.09□□□□□ -2.42
Q9N2J8 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.09□□□□□ -2.42
Q9N2J8 RNU6-274P-201ENST00000459566 107 ntBASIC-0.09□□□□□ -2.42
Q9N2J8 U6.81-201ENST00000612550 106 ntBASIC-0.09□□□□□ -2.42
Q9N2J8 IGLL4P-201ENST00000614590 133 ntBASIC-0.09□□□□□ -2.42
Q9N2J8 MIR1295B-201ENST00000636144 60 ntBASIC-0.09□□□□□ -2.42
Q9N2J8 RNU6-46P-201ENST00000383860 107 ntBASIC-0.1□□□□□ -2.43
Q9N2J8 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.1□□□□□ -2.43
Q9N2J8 RNU6-592P-201ENST00000411333 103 ntBASIC-0.1□□□□□ -2.43
Q9N2J8 AC140658.3-201ENST00000567603 271 ntBASIC-0.1□□□□□ -2.43
Q9N2J8 RNY1P1-201ENST00000364372 112 ntBASIC-0.11□□□□□ -2.43
Q9N2J8 RNU6-302P-201ENST00000365249 107 ntBASIC-0.11□□□□□ -2.43
Q9N2J8 MIR548E-201ENST00000408287 88 ntBASIC-0.11□□□□□ -2.43
Q9N2J8 MIR5582-201ENST00000579697 68 ntBASIC-0.11□□□□□ -2.43
Q9N2J8 RNU6-624P-201ENST00000363411 107 ntBASIC-0.12□□□□□ -2.43
Q9N2J8 RNU6-294P-201ENST00000364999 102 ntBASIC-0.12□□□□□ -2.43
Q9N2J8 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 222.8 ms