Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.95□□□□□ -2.56
RPAP3Q9H6T3 RNU6-905P-201ENST00000384434 107 ntBASIC-0.95□□□□□ -2.56
RPAP3Q9H6T3 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.95□□□□□ -2.56
RPAP3Q9H6T3 AP000533.3-201ENST00000447704 118 ntBASIC-0.95□□□□□ -2.56
RPAP3Q9H6T3 SNORA13-201ENST00000458790 133 ntBASIC-0.95□□□□□ -2.56
RPAP3Q9H6T3 AC022137.1-201ENST00000483735 151 ntBASIC-0.95□□□□□ -2.56
RPAP3Q9H6T3 RNU6-971P-201ENST00000516920 106 ntBASIC-0.95□□□□□ -2.56
RPAP3Q9H6T3 SNORD45B-201ENST00000364617 72 ntBASIC-0.96□□□□□ -2.56
RPAP3Q9H6T3 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.96□□□□□ -2.56
RPAP3Q9H6T3 MIR548Z-201ENST00000584743 97 ntBASIC-0.96□□□□□ -2.56
RPAP3Q9H6T3 MIR6854-201ENST00000614935 69 ntBASIC-0.96□□□□□ -2.56
RPAP3Q9H6T3 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.97□□□□□ -2.56
RPAP3Q9H6T3 SNORA63.2-201ENST00000362603 126 ntBASIC-0.98□□□□□ -2.57
RPAP3Q9H6T3 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.98□□□□□ -2.57
RPAP3Q9H6T3 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.98□□□□□ -2.57
RPAP3Q9H6T3 RNY1P7-201ENST00000384743 110 ntBASIC-0.98□□□□□ -2.57
RPAP3Q9H6T3 MIR548U-201ENST00000390728 81 ntBASIC-0.98□□□□□ -2.57
RPAP3Q9H6T3 RNU6-644P-201ENST00000391155 98 ntBASIC-0.98□□□□□ -2.57
RPAP3Q9H6T3 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.98□□□□□ -2.57
RPAP3Q9H6T3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.98□□□□□ -2.57
RPAP3Q9H6T3 MIR5009-201ENST00000578736 100 ntBASIC-0.98□□□□□ -2.57
RPAP3Q9H6T3 MIR3064-201ENST00000581130 66 ntBASIC-0.98□□□□□ -2.57
RPAP3Q9H6T3 SNORD83B-201ENST00000386745 93 ntBASIC-0.99□□□□□ -2.57
RPAP3Q9H6T3 RNU6-592P-201ENST00000411333 103 ntBASIC-0.99□□□□□ -2.57
RPAP3Q9H6T3 RNU6-431P-201ENST00000383874 107 ntBASIC-1□□□□□ -2.57
RPAP3Q9H6T3 RNU6-813P-201ENST00000384691 107 ntBASIC-1□□□□□ -2.57
RPAP3Q9H6T3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1□□□□□ -2.57
RPAP3Q9H6T3 SNORD33.1-201ENST00000516213 88 ntBASIC-1□□□□□ -2.57
RPAP3Q9H6T3 RNU6-795P-201ENST00000516323 103 ntBASIC-1□□□□□ -2.57
RPAP3Q9H6T3 AL627230.5-201ENST00000619807 58 ntBASIC-1□□□□□ -2.57
RPAP3Q9H6T3 MIR3914-2-201ENST00000637339 95 ntBASIC-1□□□□□ -2.57
RPAP3Q9H6T3 RNU6-495P-201ENST00000362995 107 ntBASIC-1.01□□□□□ -2.57
RPAP3Q9H6T3 RNU6-990P-201ENST00000364385 104 ntBASIC-1.01□□□□□ -2.57
RPAP3Q9H6T3 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.01□□□□□ -2.57
RPAP3Q9H6T3 SNORD4B-201ENST00000459083 72 ntBASIC-1.01□□□□□ -2.57
RPAP3Q9H6T3 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.01□□□□□ -2.57
RPAP3Q9H6T3 AC104996.3-201ENST00000590718 94 ntBASIC-1.01□□□□□ -2.57
RPAP3Q9H6T3 AC090425.1-201ENST00000610007 140 ntBASIC-1.01□□□□□ -2.57
RPAP3Q9H6T3 MIR409-201ENST00000362237 79 ntBASIC-1.02□□□□□ -2.57
RPAP3Q9H6T3 SNORD64-201ENST00000386683 67 ntBASIC-1.02□□□□□ -2.57
RPAP3Q9H6T3 RNU6-337P-201ENST00000391243 106 ntBASIC-1.02□□□□□ -2.57
RPAP3Q9H6T3 RNU6-255P-201ENST00000516957 105 ntBASIC-1.02□□□□□ -2.57
RPAP3Q9H6T3 MIR6773-201ENST00000612812 74 ntBASIC-1.02□□□□□ -2.57
RPAP3Q9H6T3 SNORA63.6-201ENST00000364921 119 ntBASIC-1.03□□□□□ -2.57
RPAP3Q9H6T3 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.03□□□□□ -2.57
RPAP3Q9H6T3 RNA5SP292-201ENST00000390974 118 ntBASIC-1.03□□□□□ -2.57
RPAP3Q9H6T3 SNORD90-201ENST00000391145 111 ntBASIC-1.03□□□□□ -2.57
RPAP3Q9H6T3 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.03□□□□□ -2.57
RPAP3Q9H6T3 MIR4777-201ENST00000583710 86 ntBASIC-1.03□□□□□ -2.57
RPAP3Q9H6T3 MIR4499-201ENST00000584834 69 ntBASIC-1.03□□□□□ -2.57
RPAP3Q9H6T3 snoR1.1-201ENST00000628177 80 ntBASIC-1.03□□□□□ -2.57
RPAP3Q9H6T3 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.04□□□□□ -2.58
RPAP3Q9H6T3 SNORD115-23-201ENST00000364461 82 ntBASIC-1.04□□□□□ -2.58
RPAP3Q9H6T3 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.04□□□□□ -2.58
RPAP3Q9H6T3 AC012531.4-201ENST00000616509 177 ntBASIC-1.04□□□□□ -2.58
RPAP3Q9H6T3 uc_338.19-201ENST00000616808 99 ntBASIC-1.04□□□□□ -2.58
RPAP3Q9H6T3 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.05□□□□□ -2.58
RPAP3Q9H6T3 SNORD74.6-201ENST00000364796 70 ntBASIC-1.05□□□□□ -2.58
RPAP3Q9H6T3 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.05□□□□□ -2.58
RPAP3Q9H6T3 SNORA24B-201ENST00000384176 131 ntBASIC-1.05□□□□□ -2.58
RPAP3Q9H6T3 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.05□□□□□ -2.58
RPAP3Q9H6T3 MIR147A-201ENST00000385079 72 ntBASIC-1.05□□□□□ -2.58
RPAP3Q9H6T3 MIRLET7B-201ENST00000385140 83 ntBASIC-1.05□□□□□ -2.58
RPAP3Q9H6T3 MIR548A3-201ENST00000385297 97 ntBASIC-1.05□□□□□ -2.58
RPAP3Q9H6T3 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.05□□□□□ -2.58
RPAP3Q9H6T3 RNU6-519P-201ENST00000410590 108 ntBASIC-1.05□□□□□ -2.58
RPAP3Q9H6T3 RNY1P5-201ENST00000383890 115 ntBASIC-1.06□□□□□ -2.58
RPAP3Q9H6T3 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.06□□□□□ -2.58
RPAP3Q9H6T3 MIR382-201ENST00000637119 76 ntBASIC-1.06□□□□□ -2.58
RPAP3Q9H6T3 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.07□□□□□ -2.58
RPAP3Q9H6T3 RNU6-80P-201ENST00000384195 107 ntBASIC-1.07□□□□□ -2.58
RPAP3Q9H6T3 U6.95-201ENST00000636931 70 ntBASIC-1.07□□□□□ -2.58
RPAP3Q9H6T3 RNU6-907P-201ENST00000390924 102 ntBASIC-1.08□□□□□ -2.58
RPAP3Q9H6T3 SCARNA18B-201ENST00000458806 135 ntBASIC-1.08□□□□□ -2.58
RPAP3Q9H6T3 SNORA18.5-201ENST00000516616 101 ntBASIC-1.08□□□□□ -2.58
RPAP3Q9H6T3 AC140658.3-201ENST00000567603 271 ntBASIC-1.08□□□□□ -2.58
RPAP3Q9H6T3 SNORD75.2-201ENST00000408784 58 ntBASIC-1.09□□□□□ -2.58
RPAP3Q9H6T3 SNORA19.1-201ENST00000410656 129 ntBASIC-1.09□□□□□ -2.58
RPAP3Q9H6T3 RNU7-24P-201ENST00000458867 62 ntBASIC-1.09□□□□□ -2.58
RPAP3Q9H6T3 SNORD18.2-201ENST00000459604 70 ntBASIC-1.09□□□□□ -2.58
RPAP3Q9H6T3 RNU6-659P-201ENST00000516454 104 ntBASIC-1.09□□□□□ -2.58
RPAP3Q9H6T3 RNU6-62P-201ENST00000516526 102 ntBASIC-1.09□□□□□ -2.58
RPAP3Q9H6T3 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.1□□□□□ -2.59
RPAP3Q9H6T3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.1□□□□□ -2.59
RPAP3Q9H6T3 MIR124-2-201ENST00000385081 109 ntBASIC-1.1□□□□□ -2.59
RPAP3Q9H6T3 AC021146.9-201ENST00000512503 156 ntBASIC-1.1□□□□□ -2.59
RPAP3Q9H6T3 SCARNA17-201ENST00000516183 144 ntBASIC-1.1□□□□□ -2.59
RPAP3Q9H6T3 AC090617.8-201ENST00000623339 167 ntBASIC-1.1□□□□□ -2.59
RPAP3Q9H6T3 RNU4-32P-201ENST00000363404 141 ntBASIC-1.11□□□□□ -2.59
RPAP3Q9H6T3 SNORD114-17-201ENST00000364699 75 ntBASIC-1.11□□□□□ -2.59
RPAP3Q9H6T3 RNA5SP67-201ENST00000516422 131 ntBASIC-1.11□□□□□ -2.59
RPAP3Q9H6T3 MIR4464-201ENST00000580818 92 ntBASIC-1.11□□□□□ -2.59
RPAP3Q9H6T3 U6.96-201ENST00000636425 70 ntBASIC-1.11□□□□□ -2.59
RPAP3Q9H6T3 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.12□□□□□ -2.59
RPAP3Q9H6T3 RNU6-274P-201ENST00000459566 107 ntBASIC-1.12□□□□□ -2.59
RPAP3Q9H6T3 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.13□□□□□ -2.59
RPAP3Q9H6T3 RNA5SP331-201ENST00000364986 107 ntBASIC-1.13□□□□□ -2.59
RPAP3Q9H6T3 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.13□□□□□ -2.59
RPAP3Q9H6T3 MTATP6P29-201ENST00000415057 132 ntBASIC-1.13□□□□□ -2.59
RPAP3Q9H6T3 RNU6-382P-201ENST00000365181 106 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms