Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 MIR4460-201ENST00000577862 86 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 YWHAEP2-201ENST00000580066 112 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 YWHAEP3-201ENST00000582767 121 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 IGLL4P-201ENST00000614590 133 ntBASIC0.25□□□□□ -2.37
PCNX3Q9H6A9 MIR20A-201ENST00000362279 71 ntBASIC0.24□□□□□ -2.37
PCNX3Q9H6A9 Y_RNA.73-201ENST00000362910 113 ntBASIC0.24□□□□□ -2.37
PCNX3Q9H6A9 RNA5SP173-201ENST00000364857 136 ntBASIC0.24□□□□□ -2.37
PCNX3Q9H6A9 RNA5SP484-201ENST00000458857 111 ntBASIC0.24□□□□□ -2.37
PCNX3Q9H6A9 SNORA25.13-201ENST00000516395 103 ntBASIC0.24□□□□□ -2.37
PCNX3Q9H6A9 RNU5B-6P-201ENST00000516765 68 ntBASIC0.24□□□□□ -2.37
PCNX3Q9H6A9 MIR3140-201ENST00000583685 90 ntBASIC0.24□□□□□ -2.37
PCNX3Q9H6A9 MIR4677-201ENST00000584153 80 ntBASIC0.24□□□□□ -2.37
PCNX3Q9H6A9 AC006254.2-201ENST00000603259 279 ntBASIC0.24□□□□□ -2.37
PCNX3Q9H6A9 RNU6-208P-201ENST00000362431 107 ntBASIC0.23□□□□□ -2.37
PCNX3Q9H6A9 RNU6-161P-201ENST00000363051 106 ntBASIC0.23□□□□□ -2.37
PCNX3Q9H6A9 Y_RNA.264-201ENST00000364665 102 ntBASIC0.23□□□□□ -2.37
PCNX3Q9H6A9 MIR501-201ENST00000390204 84 ntBASIC0.23□□□□□ -2.37
PCNX3Q9H6A9 AC104996.3-201ENST00000590718 94 ntBASIC0.23□□□□□ -2.37
PCNX3Q9H6A9 AC022137.1-201ENST00000483735 151 ntBASIC0.23□□□□□ -2.37
PCNX3Q9H6A9 RNU6-782P-201ENST00000516852 104 ntBASIC0.23□□□□□ -2.37
PCNX3Q9H6A9 MIR4473-201ENST00000583731 91 ntBASIC0.23□□□□□ -2.37
PCNX3Q9H6A9 U7.6-201ENST00000610841 64 ntBASIC0.23□□□□□ -2.37
PCNX3Q9H6A9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.22□□□□□ -2.37
PCNX3Q9H6A9 RNU6-497P-201ENST00000365316 104 ntBASIC0.22□□□□□ -2.37
PCNX3Q9H6A9 RNU6-1152P-201ENST00000384576 107 ntBASIC0.22□□□□□ -2.37
PCNX3Q9H6A9 MIR643-201ENST00000385267 97 ntBASIC0.22□□□□□ -2.37
PCNX3Q9H6A9 SNORD77.2-201ENST00000391045 68 ntBASIC0.22□□□□□ -2.37
PCNX3Q9H6A9 SNORA75.1-201ENST00000391130 148 ntBASIC0.22□□□□□ -2.37
PCNX3Q9H6A9 RNA5SP63-201ENST00000391225 112 ntBASIC0.22□□□□□ -2.37
PCNX3Q9H6A9 AC069113.3-201ENST00000521019 150 ntBASIC0.22□□□□□ -2.37
PCNX3Q9H6A9 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
PCNX3Q9H6A9 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
PCNX3Q9H6A9 Y_RNA.12-201ENST00000362393 112 ntBASIC0.21□□□□□ -2.38
PCNX3Q9H6A9 AC093729.1-201ENST00000513074 128 ntBASIC0.21□□□□□ -2.38
PCNX3Q9H6A9 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.21□□□□□ -2.38
PCNX3Q9H6A9 RNU6-1276P-201ENST00000365372 104 ntBASIC0.21□□□□□ -2.38
PCNX3Q9H6A9 RNU6-402P-201ENST00000410678 103 ntBASIC0.21□□□□□ -2.38
PCNX3Q9H6A9 AC097510.1-201ENST00000510945 133 ntBASIC0.21□□□□□ -2.38
PCNX3Q9H6A9 RNU7-129P-201ENST00000516128 62 ntBASIC0.21□□□□□ -2.38
PCNX3Q9H6A9 MIR548O2-201ENST00000616090 70 ntBASIC0.21□□□□□ -2.38
PCNX3Q9H6A9 Y_RNA.437-201ENST00000384113 113 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 SCARNA17.3-201ENST00000516381 125 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 AC104408.1-201ENST00000605241 170 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 AC084368.1-201ENST00000620935 65 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 MIR548BB-201ENST00000626714 66 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 Y_RNA.388-201ENST00000383919 113 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 SNORD75.2-201ENST00000408784 58 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 RNU6-762P-201ENST00000517107 102 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 SCARNA11.2-201ENST00000517183 154 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 AC062037.1-201ENST00000605302 128 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 MIR6718-201ENST00000616153 80 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 MIR1297-201ENST00000637311 77 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 MIR4679-1-201ENST00000637619 75 ntBASIC0.2□□□□□ -2.38
PCNX3Q9H6A9 MIR494-201ENST00000349529 81 ntBASIC0.19□□□□□ -2.38
PCNX3Q9H6A9 RNA5SP214-201ENST00000363378 118 ntBASIC0.19□□□□□ -2.38
PCNX3Q9H6A9 Y_RNA.313-201ENST00000365095 103 ntBASIC0.19□□□□□ -2.38
PCNX3Q9H6A9 RNA5SP128-201ENST00000365305 116 ntBASIC0.19□□□□□ -2.38
PCNX3Q9H6A9 RNA5SP299-201ENST00000391203 116 ntBASIC0.19□□□□□ -2.38
PCNX3Q9H6A9 MIR892B-201ENST00000401279 77 ntBASIC0.19□□□□□ -2.38
PCNX3Q9H6A9 MIR1255A-201ENST00000408338 113 ntBASIC0.19□□□□□ -2.38
PCNX3Q9H6A9 RNU6-592P-201ENST00000411333 103 ntBASIC0.19□□□□□ -2.38
PCNX3Q9H6A9 AL691482.2-201ENST00000457453 84 ntBASIC0.19□□□□□ -2.38
PCNX3Q9H6A9 FGF7P7-201ENST00000514120 227 ntBASIC0.19□□□□□ -2.38
PCNX3Q9H6A9 RN7SKP12-201ENST00000516275 143 ntBASIC0.19□□□□□ -2.38
PCNX3Q9H6A9 NAMPTP3-201ENST00000569273 224 ntBASIC0.19□□□□□ -2.38
PCNX3Q9H6A9 MIR5588-201ENST00000581890 63 ntBASIC0.19□□□□□ -2.38
PCNX3Q9H6A9 SNORD73B-201ENST00000364394 72 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 Y_RNA.407-201ENST00000383986 113 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 MIR610-201ENST00000385139 96 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 MIR548H2-201ENST00000408874 88 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 RNU6-274P-201ENST00000459566 107 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 MIR4514-201ENST00000581410 57 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 MIR499B-201ENST00000636498 73 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 SNORD114-29-201ENST00000364819 70 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 RNU6-652P-201ENST00000365488 107 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 SNORA24B-201ENST00000384176 131 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 RNY4P29-201ENST00000410801 97 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 AL450471.1-201ENST00000447509 127 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 AC108740.1-201ENST00000498629 225 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 MIR4666B-201ENST00000578142 81 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 MIR4752-201ENST00000579672 72 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 MIR3925-201ENST00000584674 77 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 MIR6509-201ENST00000614603 85 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 AL109933.3-201ENST00000619095 188 ntBASIC0.18□□□□□ -2.38
PCNX3Q9H6A9 SNORD114-9-201ENST00000364370 72 ntBASIC0.17□□□□□ -2.38
PCNX3Q9H6A9 MIR4743-201ENST00000584576 69 ntBASIC0.17□□□□□ -2.38
PCNX3Q9H6A9 Y_RNA.426-201ENST00000384068 113 ntBASIC0.16□□□□□ -2.38
PCNX3Q9H6A9 RNU7-159P-201ENST00000459284 62 ntBASIC0.16□□□□□ -2.38
PCNX3Q9H6A9 RNU6-54P-201ENST00000365563 107 ntBASIC0.16□□□□□ -2.38
PCNX3Q9H6A9 Y_RNA.660-201ENST00000516002 120 ntBASIC0.16□□□□□ -2.38
PCNX3Q9H6A9 RNU6-1108P-201ENST00000516308 104 ntBASIC0.16□□□□□ -2.38
PCNX3Q9H6A9 MIR3675-201ENST00000583661 73 ntBASIC0.16□□□□□ -2.38
PCNX3Q9H6A9 SNORA42.1-201ENST00000363515 137 ntBASIC0.15□□□□□ -2.39
PCNX3Q9H6A9 RNU6-340P-201ENST00000364005 107 ntBASIC0.15□□□□□ -2.39
PCNX3Q9H6A9 MIR106A-201ENST00000384870 81 ntBASIC0.15□□□□□ -2.39
PCNX3Q9H6A9 RNA5SP134-201ENST00000516492 96 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms