Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SNORA24B-201ENST00000384176 131 ntBASIC-0.34□□□□□ -2.46
NXF3Q9H4D5 SNORA18.5-201ENST00000516616 101 ntBASIC-0.34□□□□□ -2.46
NXF3Q9H4D5 RNU6-990P-201ENST00000364385 104 ntBASIC-0.35□□□□□ -2.47
NXF3Q9H4D5 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.35□□□□□ -2.47
NXF3Q9H4D5 RNU6-22P-201ENST00000384355 107 ntBASIC-0.35□□□□□ -2.47
NXF3Q9H4D5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
NXF3Q9H4D5 MIR1302-5-201ENST00000408164 150 ntBASIC-0.35□□□□□ -2.47
NXF3Q9H4D5 RNU6-887P-201ENST00000410660 100 ntBASIC-0.35□□□□□ -2.47
NXF3Q9H4D5 AL445193.1-201ENST00000441183 141 ntBASIC-0.35□□□□□ -2.47
NXF3Q9H4D5 snoU13.13-201ENST00000458842 104 ntBASIC-0.35□□□□□ -2.47
NXF3Q9H4D5 SNORD2-201ENST00000459163 69 ntBASIC-0.35□□□□□ -2.47
NXF3Q9H4D5 uc_338.36-201ENST00000622331 158 ntBASIC-0.35□□□□□ -2.47
NXF3Q9H4D5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.35□□□□□ -2.47
NXF3Q9H4D5 RNU6-834P-201ENST00000362367 110 ntBASIC-0.36□□□□□ -2.47
NXF3Q9H4D5 SNORD56B-201ENST00000384713 71 ntBASIC-0.36□□□□□ -2.47
NXF3Q9H4D5 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.36□□□□□ -2.47
NXF3Q9H4D5 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.36□□□□□ -2.47
NXF3Q9H4D5 RNU6-62P-201ENST00000516526 102 ntBASIC-0.36□□□□□ -2.47
NXF3Q9H4D5 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.36□□□□□ -2.47
NXF3Q9H4D5 MIR4645-201ENST00000583158 77 ntBASIC-0.36□□□□□ -2.47
NXF3Q9H4D5 SNORD115-25-201ENST00000362619 82 ntBASIC-0.37□□□□□ -2.47
NXF3Q9H4D5 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.37□□□□□ -2.47
NXF3Q9H4D5 MIR4802-201ENST00000581881 80 ntBASIC-0.37□□□□□ -2.47
NXF3Q9H4D5 RNU6-495P-201ENST00000362995 107 ntBASIC-0.38□□□□□ -2.47
NXF3Q9H4D5 SNORD14C-201ENST00000365382 88 ntBASIC-0.38□□□□□ -2.47
NXF3Q9H4D5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.38□□□□□ -2.47
NXF3Q9H4D5 RNU6-589P-201ENST00000516485 107 ntBASIC-0.38□□□□□ -2.47
NXF3Q9H4D5 RNU6-320P-201ENST00000516511 106 ntBASIC-0.38□□□□□ -2.47
NXF3Q9H4D5 RNA5SP169-201ENST00000517268 117 ntBASIC-0.38□□□□□ -2.47
NXF3Q9H4D5 MIR3910-1-201ENST00000580936 111 ntBASIC-0.38□□□□□ -2.47
NXF3Q9H4D5 U7.3-201ENST00000616123 62 ntBASIC-0.38□□□□□ -2.47
NXF3Q9H4D5 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.39□□□□□ -2.47
NXF3Q9H4D5 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.39□□□□□ -2.47
NXF3Q9H4D5 RNU6-900P-201ENST00000384498 102 ntBASIC-0.39□□□□□ -2.47
NXF3Q9H4D5 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.39□□□□□ -2.47
NXF3Q9H4D5 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.39□□□□□ -2.47
NXF3Q9H4D5 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.39□□□□□ -2.47
NXF3Q9H4D5 snoU13.17-201ENST00000458802 104 ntBASIC-0.39□□□□□ -2.47
NXF3Q9H4D5 MIR5589-201ENST00000579442 60 ntBASIC-0.39□□□□□ -2.47
NXF3Q9H4D5 MIR450A1-201ENST00000362262 91 ntBASIC-0.4□□□□□ -2.47
NXF3Q9H4D5 SNORD116-10-201ENST00000363791 102 ntBASIC-0.4□□□□□ -2.47
NXF3Q9H4D5 RNY4P3-201ENST00000365254 95 ntBASIC-0.4□□□□□ -2.47
NXF3Q9H4D5 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.4□□□□□ -2.47
NXF3Q9H4D5 RNU7-153P-201ENST00000516455 62 ntBASIC-0.4□□□□□ -2.47
NXF3Q9H4D5 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.4□□□□□ -2.47
NXF3Q9H4D5 RNU6-502P-201ENST00000362419 108 ntBASIC-0.41□□□□□ -2.48
NXF3Q9H4D5 RNU6-824P-201ENST00000363724 104 ntBASIC-0.41□□□□□ -2.48
NXF3Q9H4D5 RNU6-382P-201ENST00000365181 106 ntBASIC-0.41□□□□□ -2.48
NXF3Q9H4D5 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.41□□□□□ -2.48
NXF3Q9H4D5 MIR203A-201ENST00000384836 110 ntBASIC-0.41□□□□□ -2.48
NXF3Q9H4D5 MIR196A2-201ENST00000385189 110 ntBASIC-0.41□□□□□ -2.48
NXF3Q9H4D5 RNU6-479P-201ENST00000516348 105 ntBASIC-0.41□□□□□ -2.48
NXF3Q9H4D5 RNA5SP395-201ENST00000516567 118 ntBASIC-0.41□□□□□ -2.48
NXF3Q9H4D5 RNA5SP66-201ENST00000517178 101 ntBASIC-0.41□□□□□ -2.48
NXF3Q9H4D5 SNORA40.17-201ENST00000517256 115 ntBASIC-0.41□□□□□ -2.48
NXF3Q9H4D5 MIR5704-201ENST00000584029 77 ntBASIC-0.41□□□□□ -2.48
NXF3Q9H4D5 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.42□□□□□ -2.48
NXF3Q9H4D5 SNORD115-27-201ENST00000364430 82 ntBASIC-0.42□□□□□ -2.48
NXF3Q9H4D5 RNU6-901P-201ENST00000384593 106 ntBASIC-0.42□□□□□ -2.48
NXF3Q9H4D5 RNU7-24P-201ENST00000458867 62 ntBASIC-0.42□□□□□ -2.48
NXF3Q9H4D5 RNU7-55P-201ENST00000459426 62 ntBASIC-0.42□□□□□ -2.48
NXF3Q9H4D5 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
NXF3Q9H4D5 AC114755.3-201ENST00000481111 251 ntBASIC-0.42□□□□□ -2.48
NXF3Q9H4D5 MIR4280-201ENST00000582178 76 ntBASIC-0.42□□□□□ -2.48
NXF3Q9H4D5 MIR4636-201ENST00000582271 80 ntBASIC-0.42□□□□□ -2.48
NXF3Q9H4D5 MIR8064-201ENST00000612863 90 ntBASIC-0.42□□□□□ -2.48
NXF3Q9H4D5 AC132825.6-201ENST00000638861 357 ntBASIC-0.42□□□□□ -2.48
NXF3Q9H4D5 SNORD114-28-201ENST00000363610 72 ntBASIC-0.43□□□□□ -2.48
NXF3Q9H4D5 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.43□□□□□ -2.48
NXF3Q9H4D5 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.43□□□□□ -2.48
NXF3Q9H4D5 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
NXF3Q9H4D5 SNORD75.2-201ENST00000408784 58 ntBASIC-0.43□□□□□ -2.48
NXF3Q9H4D5 MTATP6P29-201ENST00000415057 132 ntBASIC-0.43□□□□□ -2.48
NXF3Q9H4D5 RNU6-313P-201ENST00000516317 112 ntBASIC-0.43□□□□□ -2.48
NXF3Q9H4D5 SNORD38.3-201ENST00000516599 73 ntBASIC-0.43□□□□□ -2.48
NXF3Q9H4D5 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.43□□□□□ -2.48
NXF3Q9H4D5 MIR4432-201ENST00000581823 84 ntBASIC-0.43□□□□□ -2.48
NXF3Q9H4D5 MIR8068-201ENST00000618032 68 ntBASIC-0.43□□□□□ -2.48
NXF3Q9H4D5 MIR4773-1-201ENST00000637203 78 ntBASIC-0.43□□□□□ -2.48
NXF3Q9H4D5 RNU6-766P-201ENST00000362478 107 ntBASIC-0.44□□□□□ -2.48
NXF3Q9H4D5 SNORA63.6-201ENST00000364921 119 ntBASIC-0.44□□□□□ -2.48
NXF3Q9H4D5 RNU6-35P-201ENST00000384530 107 ntBASIC-0.44□□□□□ -2.48
NXF3Q9H4D5 RNU6-337P-201ENST00000391243 106 ntBASIC-0.44□□□□□ -2.48
NXF3Q9H4D5 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.44□□□□□ -2.48
NXF3Q9H4D5 RNA5SP147-201ENST00000516493 109 ntBASIC-0.44□□□□□ -2.48
NXF3Q9H4D5 MIR4796-201ENST00000580742 81 ntBASIC-0.44□□□□□ -2.48
NXF3Q9H4D5 MIR6773-201ENST00000612812 74 ntBASIC-0.44□□□□□ -2.48
NXF3Q9H4D5 AC090617.8-201ENST00000623339 167 ntBASIC-0.44□□□□□ -2.48
NXF3Q9H4D5 RNA5SP275-201ENST00000363936 118 ntBASIC-0.45□□□□□ -2.48
NXF3Q9H4D5 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.45□□□□□ -2.48
NXF3Q9H4D5 AP001180.6-201ENST00000584918 159 ntBASIC-0.45□□□□□ -2.48
NXF3Q9H4D5 SNORD113-1-201ENST00000365321 69 ntBASIC-0.46□□□□□ -2.48
NXF3Q9H4D5 RNY4P18-201ENST00000391107 89 ntBASIC-0.46□□□□□ -2.48
NXF3Q9H4D5 RNU2-51P-201ENST00000410708 197 ntBASIC-0.46□□□□□ -2.48
NXF3Q9H4D5 AC096531.1-201ENST00000419107 107 ntBASIC-0.46□□□□□ -2.48
NXF3Q9H4D5 MTATP8P2-201ENST00000435212 202 ntBASIC-0.46□□□□□ -2.48
NXF3Q9H4D5 AC021146.9-201ENST00000512503 156 ntBASIC-0.46□□□□□ -2.48
NXF3Q9H4D5 AC093726.3-201ENST00000637588 150 ntBASIC-0.46□□□□□ -2.48
NXF3Q9H4D5 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.47□□□□□ -2.48
NXF3Q9H4D5 RNU6-284P-201ENST00000411105 106 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 1165.1 ms