Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 MIR4636-201ENST00000582271 80 ntBASIC0.08□□□□□ -2.4
NUP88Q99567 MIR5589-201ENST00000579442 60 ntBASIC0.06□□□□□ -2.4
NUP88Q99567 RNY4P3-201ENST00000365254 95 ntBASIC0.05□□□□□ -2.4
NUP88Q99567 MIR145-201ENST00000384967 88 ntBASIC0.05□□□□□ -2.4
NUP88Q99567 RNA5SP292-201ENST00000390974 118 ntBASIC0.05□□□□□ -2.4
NUP88Q99567 MIR4667-201ENST00000578933 66 ntBASIC0.05□□□□□ -2.4
NUP88Q99567 MIR548AE1-201ENST00000583292 70 ntBASIC0.05□□□□□ -2.4
NUP88Q99567 MIR548O2-201ENST00000616090 70 ntBASIC0.05□□□□□ -2.4
NUP88Q99567 MIR371B-201ENST00000638082 66 ntBASIC0.05□□□□□ -2.4
NUP88Q99567 RNU6-154P-201ENST00000384306 106 ntBASIC0.04□□□□□ -2.4
NUP88Q99567 RNA5SP163-201ENST00000410304 99 ntBASIC0.04□□□□□ -2.4
NUP88Q99567 MTATP6P29-201ENST00000415057 132 ntBASIC0.04□□□□□ -2.4
NUP88Q99567 SNORA18.5-201ENST00000516616 101 ntBASIC0.04□□□□□ -2.4
NUP88Q99567 MIR4802-201ENST00000581881 80 ntBASIC0.04□□□□□ -2.4
NUP88Q99567 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.04□□□□□ -2.4
NUP88Q99567 MIR4290-201ENST00000583807 95 ntBASIC0.03□□□□□ -2.4
NUP88Q99567 MALAT1.1-201ENST00000618249 95 ntBASIC0.03□□□□□ -2.4
NUP88Q99567 SNORA63.2-201ENST00000362603 126 ntBASIC0.02□□□□□ -2.41
NUP88Q99567 MIR876-201ENST00000401147 81 ntBASIC0.02□□□□□ -2.41
NUP88Q99567 RNU6-762P-201ENST00000517107 102 ntBASIC0.02□□□□□ -2.41
NUP88Q99567 MIR4743-201ENST00000584576 69 ntBASIC0.02□□□□□ -2.41
NUP88Q99567 SNORD114-29-201ENST00000364819 70 ntBASIC0.01□□□□□ -2.41
NUP88Q99567 Y_RNA.348-201ENST00000365403 103 ntBASIC0.01□□□□□ -2.41
NUP88Q99567 Y_RNA.437-201ENST00000384113 113 ntBASIC0.01□□□□□ -2.41
NUP88Q99567 RNU7-159P-201ENST00000459284 62 ntBASIC0.01□□□□□ -2.41
NUP88Q99567 RNU7-188P-201ENST00000517063 64 ntBASIC0.01□□□□□ -2.41
NUP88Q99567 MIR3140-201ENST00000583685 90 ntBASIC0.01□□□□□ -2.41
NUP88Q99567 RNU6-1051P-201ENST00000365471 102 ntBASIC0□□□□□ -2.41
NUP88Q99567 RNU6-54P-201ENST00000365563 107 ntBASIC0□□□□□ -2.41
NUP88Q99567 MIR1236-201ENST00000408340 102 ntBASIC0□□□□□ -2.41
NUP88Q99567 MIR6514-201ENST00000622549 70 ntBASIC0□□□□□ -2.41
NUP88Q99567 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.01□□□□□ -2.41
NUP88Q99567 RNU6-168P-201ENST00000516189 101 ntBASIC-0.01□□□□□ -2.41
NUP88Q99567 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.01□□□□□ -2.41
NUP88Q99567 RN7SL660P-201ENST00000614852 299 ntBASIC-0.01□□□□□ -2.41
NUP88Q99567 RNU5F-1-201ENST00000362507 117 ntBASIC-0.02□□□□□ -2.41
NUP88Q99567 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
NUP88Q99567 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.02□□□□□ -2.41
NUP88Q99567 SNORD90-201ENST00000391145 111 ntBASIC-0.03□□□□□ -2.41
NUP88Q99567 RNU6-180P-201ENST00000516697 61 ntBASIC-0.03□□□□□ -2.41
NUP88Q99567 MIR4796-201ENST00000580742 81 ntBASIC-0.03□□□□□ -2.41
NUP88Q99567 MIR652-201ENST00000385278 98 ntBASIC-0.04□□□□□ -2.42
NUP88Q99567 RNU7-165P-201ENST00000458864 60 ntBASIC-0.04□□□□□ -2.42
NUP88Q99567 RNU6-175P-201ENST00000516896 107 ntBASIC-0.04□□□□□ -2.42
NUP88Q99567 IGLVI-20-201ENST00000519296 130 ntBASIC-0.04□□□□□ -2.42
NUP88Q99567 RNU6-640P-201ENST00000363693 105 ntBASIC-0.05□□□□□ -2.42
NUP88Q99567 SNORD114-4-201ENST00000363962 75 ntBASIC-0.05□□□□□ -2.42
NUP88Q99567 RNU6-929P-201ENST00000384429 107 ntBASIC-0.05□□□□□ -2.42
NUP88Q99567 RNA5SP98-201ENST00000363158 137 ntBASIC-0.06□□□□□ -2.42
NUP88Q99567 RNU6-153P-201ENST00000364422 104 ntBASIC-0.06□□□□□ -2.42
NUP88Q99567 SNORD116-22-201ENST00000384430 92 ntBASIC-0.06□□□□□ -2.42
NUP88Q99567 RNU6-905P-201ENST00000384434 107 ntBASIC-0.06□□□□□ -2.42
NUP88Q99567 MIR519C-201ENST00000385053 87 ntBASIC-0.06□□□□□ -2.42
NUP88Q99567 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
NUP88Q99567 RNA5SP89-201ENST00000410300 108 ntBASIC-0.06□□□□□ -2.42
NUP88Q99567 MIR20A-201ENST00000362279 71 ntBASIC-0.07□□□□□ -2.42
NUP88Q99567 SNORD115-37-201ENST00000363768 82 ntBASIC-0.07□□□□□ -2.42
NUP88Q99567 SNORA24B-201ENST00000384176 131 ntBASIC-0.07□□□□□ -2.42
NUP88Q99567 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.07□□□□□ -2.42
NUP88Q99567 MIR106A-201ENST00000384870 81 ntBASIC-0.07□□□□□ -2.42
NUP88Q99567 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.07□□□□□ -2.42
NUP88Q99567 Z95118.1-201ENST00000421372 247 ntBASIC-0.07□□□□□ -2.42
NUP88Q99567 MIR4668-201ENST00000582284 70 ntBASIC-0.07□□□□□ -2.42
NUP88Q99567 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.07□□□□□ -2.42
NUP88Q99567 SNORD114-31-201ENST00000363219 75 ntBASIC-0.08□□□□□ -2.42
NUP88Q99567 SNORD42B-201ENST00000458893 67 ntBASIC-0.08□□□□□ -2.42
NUP88Q99567 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.08□□□□□ -2.42
NUP88Q99567 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.09□□□□□ -2.42
NUP88Q99567 MIR488-201ENST00000365739 83 ntBASIC-0.09□□□□□ -2.42
NUP88Q99567 CR383656.4-201ENST00000546909 122 ntBASIC-0.09□□□□□ -2.42
NUP88Q99567 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.43
NUP88Q99567 SNORA49-201ENST00000386157 136 ntBASIC-0.1□□□□□ -2.43
NUP88Q99567 RNU7-153P-201ENST00000516455 62 ntBASIC-0.1□□□□□ -2.43
NUP88Q99567 MIR1295B-201ENST00000636144 60 ntBASIC-0.1□□□□□ -2.43
NUP88Q99567 SNORD115-27-201ENST00000364430 82 ntBASIC-0.11□□□□□ -2.43
NUP88Q99567 MIR582-201ENST00000365731 98 ntBASIC-0.11□□□□□ -2.43
NUP88Q99567 RNY1P7-201ENST00000384743 110 ntBASIC-0.11□□□□□ -2.43
NUP88Q99567 RNA5SP25-201ENST00000410815 110 ntBASIC-0.11□□□□□ -2.43
NUP88Q99567 snoU13.19-201ENST00000459148 104 ntBASIC-0.11□□□□□ -2.43
NUP88Q99567 AC104692.1-201ENST00000472406 90 ntBASIC-0.11□□□□□ -2.43
NUP88Q99567 AC145423.2-201ENST00000610631 239 ntBASIC-0.11□□□□□ -2.43
NUP88Q99567 MIR6507-201ENST00000613630 70 ntBASIC-0.11□□□□□ -2.43
NUP88Q99567 MIR655-201ENST00000362159 97 ntBASIC-0.12□□□□□ -2.43
NUP88Q99567 AC244090.1-201ENST00000441884 93 ntBASIC-0.12□□□□□ -2.43
NUP88Q99567 RNU6-758P-201ENST00000516292 89 ntBASIC-0.12□□□□□ -2.43
NUP88Q99567 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.13□□□□□ -2.43
NUP88Q99567 RNY4P30-201ENST00000410216 95 ntBASIC-0.13□□□□□ -2.43
NUP88Q99567 RNU6-402P-201ENST00000410678 103 ntBASIC-0.13□□□□□ -2.43
NUP88Q99567 AC097510.1-201ENST00000510945 133 ntBASIC-0.13□□□□□ -2.43
NUP88Q99567 AP001180.6-201ENST00000584918 159 ntBASIC-0.13□□□□□ -2.43
NUP88Q99567 MIR148A-201ENST00000362215 68 ntBASIC-0.14□□□□□ -2.43
NUP88Q99567 RNU6-633P-201ENST00000362612 103 ntBASIC-0.14□□□□□ -2.43
NUP88Q99567 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.14□□□□□ -2.43
NUP88Q99567 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.14□□□□□ -2.43
NUP88Q99567 AC244250.2-201ENST00000418731 148 ntBASIC-0.14□□□□□ -2.43
NUP88Q99567 MIR4493-201ENST00000584016 73 ntBASIC-0.14□□□□□ -2.43
NUP88Q99567 AC006254.2-201ENST00000603259 279 ntBASIC-0.14□□□□□ -2.43
NUP88Q99567 MIR214-201ENST00000385214 110 ntBASIC-0.15□□□□□ -2.43
NUP88Q99567 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.15□□□□□ -2.43
NUP88Q99567 AL627230.5-201ENST00000619807 58 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 600.6 ms